Part of scaffold_1199 (Scaffold)

For more information consult the page for scaffold_1199 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ZEB1 ENSTTRG00000011798 (Bottlenosed dolphin)

Gene Details

zinc finger E-box binding homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011188, Bottlenosed dolphin)

Protein Percentage 87.12%
cDNA percentage 86.89%
Ka/Ks Ratio 0.19875 (Ka = 0.0213, Ks = 0.1074)

ZEB1 ENSBTAG00000020053 (Cow)

Gene Details

zinc finger E-box-binding homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038655, Cow)

Protein Percentage 87.31%
cDNA percentage 87.24%
Ka/Ks Ratio 0.19273 (Ka = 0.0466, Ks = 0.242)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2622 bp    Location:289500..284930   Strand:-
>bmy_15756
ATGAATGTAATTTTTTGTTGTTGTTTAGGAGAGAAGCCATATGAATGCCCAAACTGCAAGAAACGTTTTTCCCATTCCGGTTCCTATAGCTCACACATAAGCAGTAAGAAATGTATCAGCCTGATGCCTGTGAACGGGCGACCACGAACAGGGCTCAAGACCTCGCAGTGTCCCTCACCATCTCTCTCGGCATCACCAGGCAGTCCCACGCGACCACAGATACGGCAGAAGATAGAGAATAAGCCCTTCCAAGAACAACTTTCCGTAAACCAAATCAAAACTGAGCCTGTGGATTATGAGTTCAAGCCCATAGTGGTTGCTTCAGGAATCAACTGTTCAACCCCTTTACAGAATGGGGTTTTCAGTGGTGGTGGCCCCTTACAGGCAACCAGTGCTCCTCAGGGTGTGGTGCAAGCCGTTGTTCTGCCAACGGTGGGTTTGGTGTCSCCCATCAGTATCAATTTAAGTGATATTCAGAATGTACTTAAAGTGGCAGTAGATGGTAATGTAATCAGGCAAGTTTTGGAGAATAATCAAGCCAATCTTGCATCCAAAGAACAAGAAACAATCAACGCTTCATCCATCCAGCAAGGTGGCCATTCTGTTATTTCAGCCATCAGTCTTCCTCTGGTTGATCAAGATGGAACAACCAAAATCATCATTAACTACAGTCTTGAACAACCTAGCCAACTTCAAGTTGTTCCTCAGAACTTAAAAAAAGAAAATCCAGTCCCCACCAACAGTTGCAAAAGTGAAAAGTTACCAGAAGATCTTACTGTTAAATCTGAGAAGGACAAAAGCTTTGAAGGAGGGGGGAATGACAGCACTTGCCTCCTGTGTGACGACTGTCCAGGGGACATCAGCGCACTTCCGGAGCTAAAGCACTATGACCTGAAGCAGCCCGCCCAGCCCCATCTGCCCCCCACACCAGAAGCTGCCAAGCCCGAGGCCTCTGCCCCCTCGGGGTCCGGAGATGGCAGTCTGTCTCCCAGTCAGCCACCTTTAAAGAACCTCCTGTCTCTTCTGAAAGCATATTATGCCTTGAATGCACAGCCAAGTGCAGAAGAGCTCTCAAAAATTGCTGACTCAGTGAACCTACCGCCGGATGTAGTGAAAAAGTGGTTTGAAAAGATGCAGACGGGGCAGACTTCAGTGCAGTCTTCTGAAGCATCTCCTCCCGAGCCAGGCAAAGCCAACACCCCTGCAAAGAACGATGATCAGCCTCAACCTACAAACGCAGATGACTCCCAGGACGGCACAAGGAATCTCCAGAGCCCTCTGAAGATAACTAGCTCCCCCGTCTTACCAGTGGGCTCGGCCGTCAATGGTTCCAGAAGCAGCGCTTCATCCCCATCCCCCCTCAACCTCTCCTCCTCCGGAAACCCACAGGGTTACTCGTACCCGGCAGAAGGGGCACAGGAAGAGCCACAAGTCGAACCTCTTGATCTTTCACTACCAAAGCAACAGGGAGAGTTATTGGAAAGGTCAACTATCACTAGTGTTTACCAGAACAGTGTTTATTCTGTCCAGGAAGAACCCTTGAACTTGTCTTGTGCAAAAAAGGAGCCACAAAAGGACAGTTGTGTCACAGACTCAGAACCAGTTGTAAATGTAATCCCACCAAGTGCCAACCCCATAAATATTGCTATACCTACAGTCACTGCCCAGTTACCCACGATTGTGGCCATCACTGACCAGAACAGCGTTCCGTGCTTGCGAGCGCTGGCGGCCAACAAGCAGACCATCCTGATCCCCCAGGTCGCGTAYACGTACTCGACTGCGGTCAGCCCCGCGGTCCAGGAAGCATCCCTGAAGGTGACCCAGCCCAACGGAAATCAGGATGAAAGGCAAGACACTAGCTCAGAAGGAGTATCAAATGTAGAAGATCAGAATGACTCTGATTCCACGCCACCCAAAAAGAAAATGCGAAAGACAGAAAATGGAATGTATGCTTGTGATTTGTGTGATAAGATATTCCAGAAGAGTAGCTCGTTGTTGAGACATAAATATGAACACACAGGTAAAAGACCTCACGAGTGCGGCATTTGCAAAAAGGCATTTAAACACAAGCATCACCTGATCGAGCACACGCGCTTGCATTCCGGGGAGAAGCCCTACCAGTGCGACAAGTGCGGGAAGCGCTTCTCCCACTCGGGCTCCTATTCCCAGCACATGAACCACCGCTACTCCTACTGCAAGAGGGAGGCCGAGGGGCCGGAGCCGGGGGCCTCGGGCCCGGGGGGCCCGCCCGCGCACCACGCGGGGGCCCGCGCCTCCCCCTCGCAGGGCGACTCGGACGAGAGGGAGAGCTCCACACGGGAGGAGGACGAGGACAGTGACAAGGAGGAGGAGGAGGAGGAGGAGGAGAGGGAGACGGAGGAGCTGCAGGCGGAAAAGGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTGAAGGTGCGAGGGAGGGCGCGGGAGCTGGAAGCCCAGCCCGCAGCTTAGAACACAAAGTCGGCCAGGGCGGTGAGCAGGTGTCTGAAGAGAAAACAAACGAAGCCTGA

Related Sequences

bmy_15756T0 Protein

Length: 874 aa      View alignments
>bmy_15756T0
MNVIFCCCLGEKPYECPNCKKRFSHSGSYSSHISSKKCISLMPVNGRPRTGLKTSQCPSPSLSASPGSPTRPQIRQKIENKPFQEQLSVNQIKTEPVDYEFKPIVVASGINCSTPLQNGVFSGGGPLQATSAPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAVDGNVIRQVLENNQANLASKEQETINASSIQQGGHSVISAISLPLVDQDGTTKIIINYSLEQPSQLQVVPQNLKKENPVPTNSCKSEKLPEDLTVKSEKDKSFEGGGNDSTCLLCDDCPGDISALPELKHYDLKQPAQPHLPPTPEAAKPEASAPSGSGDGSLSPSQPPLKNLLSLLKAYYALNAQPSAEELSKIADSVNLPPDVVKKWFEKMQTGQTSVQSSEASPPEPGKANTPAKNDDQPQPTNADDSQDGTRNLQSPLKITSSPVLPVGSAVNGSRSSASSPSPLNLSSSGNPQGYSYPAEGAQEEPQVEPLDLSLPKQQGELLERSTITSVYQNSVYSVQEEPLNLSCAKKEPQKDSCVTDSEPVVNVIPPSANPINIAIPTVTAQLPTIVAITDQNSVPCLRALAANKQTILIPQVAYTYSTAVSPAVQEASLKVTQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKTENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHTRLHSGEKPYQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEGPEPGASGPGGPPAHHAGARASPSQGDSDERESSTREEDEDSDKEEEEEEEERETEELQAEKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGAREGAGAGSPARSLEHKVGQGGEQVSEEKTNEA*