KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:48:53 2014 Check: 00 .. Name: ENSTTRP00000011188/1-1120 Len: 1134 Check: 1833 Weight: 1.00 Name: bmy_15756T0/1-873 Len: 1134 Check: 5789 Weight: 1.00 Name: ENSP00000354487/1-1125 Len: 1134 Check: 6976 Weight: 1.00 Name: ENSBTAP00000038655/1-1107 Len: 1134 Check: 7605 Weight: 1.00 // 1 50 ENSTTRP00000011188/1-1120 MADGPRCKRR KQANPRRNNV TNYNTVVETN SDSDDEDKLH IVEEESITDA bmy_15756T0/1-873 ---------- ---------- --MNVI---- ---------- ---------- ENSP00000354487/1-1125 MADGPRCKRR KQANPRRNNV TNYNTVVETN SDSDDEDKLH IVEEESVTDA ENSBTAP00000038655/1-1107 ---------- ---------- TNYNTVVETN SDSDDEDKLH IVEEESITDA 51 100 ENSTTRP00000011188/1-1120 ADCEGGAPED GLPTDQAVLP G-SSAREGNV KSCWEDDAGK EGQEILGPEA bmy_15756T0/1-873 ---------- ---------- ---------- ---------- ---------- ENSP00000354487/1-1125 ADCE-GVPED DLPTDQTVLP GRSSEREGNA KNCWEDDTGK EGQEILGPEA ENSBTAP00000038655/1-1107 ADCEGGVPDD DLPSDQTVLP G-SSAREGSA KSCWEDDAGK EGQEILGPEA 101 150 ENSTTRP00000011188/1-1120 RADEVGGTXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15756T0/1-873 ---------- ---------- ---------- ---------- ---------- ENSP00000354487/1-1125 QADEAGCTVK DDECESDAEN EQNHDPNVEE FLQQQDTAVI FPEAPEEDQR ENSBTAP00000038655/1-1107 RADEVGCAVK DDECDSDAEN EQNHDPNVEE FLQQQDTAVI YPEAPEDDQR 151 200 ENSTTRP00000011188/1-1120 XXXXXXXXXX XXXTPDAFSQ LLTCPYCDRG YKRFTSLKEH IKYRHEKNED bmy_15756T0/1-873 ---------- ---------- ---------- ---------- ---------- ENSP00000354487/1-1125 QGTPEASGHD ENGTPDAFSQ LLTCPYCDRG YKRFTSLKEH IKYRHEKNED ENSBTAP00000038655/1-1107 QGTPEASGHD ENGTPDAFSQ LLTCPYCDRG YKRFTSLKEH IKYRHEKNED 201 250 ENSTTRP00000011188/1-1120 NFSCSLCSYT FAYRTQLERH MTSHKSGRDQ RHVTQSGGNR KFKCTECGKA bmy_15756T0/1-873 -FCCCL---- ---------- ---------- ---------- ---------- ENSP00000354487/1-1125 NFSCSLCSYT FAYRTQLERH MTSHKSGRDQ RHVTQSGCNR KFKCTECGKA ENSBTAP00000038655/1-1107 NFSCSLCSYT FAYRTQLERH MTSHKSGREQ RHVTQSGGNR KFKCTECGKA 251 300 ENSTTRP00000011188/1-1120 FKYKHHLKEH LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCISLMPV bmy_15756T0/1-873 ---------- -----GEKPY ECPNCKKRFS HSGSYSSHIS SKKCISLMPV ENSP00000354487/1-1125 FKYKHHLKEH LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCISLIPV ENSBTAP00000038655/1-1107 FKYKHHLKEH LRIHSGEKPY ECPNCKKRFS HSGSYSSHIS SKKCISLMPV 301 350 ENSTTRP00000011188/1-1120 NGRPRTGLKT SQCPSPSLSA SPGSPTRPQI RQKIENKPFQ EQLSVNQIKT bmy_15756T0/1-873 NGRPRTGLKT SQCPSPSLSA SPGSPTRPQI RQKIENKPFQ EQLSVNQIKT ENSP00000354487/1-1125 NGRPRTGLKT SQCSSPSLSA SPGSPTRPQI RQKIENKPLQ EQLSVNQIKT ENSBTAP00000038655/1-1107 NGRPRTGLKT SQCSSPSLSA SPGSPTRPQM RQKIENKPLQ EQLPVNQIKT 351 400 ENSTTRP00000011188/1-1120 EPVDYEFKPI VVASGINCST PLQNGVFSGG GPLQATSTPQ GVVQAVVLPT bmy_15756T0/1-873 EPVDYEFKPI VVASGINCST PLQNGVFSGG GPLQATSAPQ GVVQAVVLPT ENSP00000354487/1-1125 EPVDYEFKPI VVASGINCST PLQNGVFTGG GPLQATSSPQ GMVQAVVLPT ENSBTAP00000038655/1-1107 EPVDYEFKPI VVASGINCSA PLQNGVFSGG GPLQATSSPQ GVVQAVVLPT 401 450 ENSTTRP00000011188/1-1120 VGLVSPISIN LSDIQNVLKV AVDGNVIRQV LENNQANLAS KEQETISASS bmy_15756T0/1-873 VGLVSPISIN LSDIQNVLKV AVDGNVIRQV LENNQANLAS KEQETINASS ENSP00000354487/1-1125 VGLVSPISIN LSDIQNVLKV AVDGNVIRQV LENNQANLAS KEQETINASP ENSBTAP00000038655/1-1107 VGLVSPISIN LSDIQNVLKV AVDGNVIRQV LENNQANLAS KEQETINASS 451 500 ENSTTRP00000011188/1-1120 IQQGGHSVIS AISLPLVDQD GTTKIIINYS LEQPSQLQVV PQNLKKENPV bmy_15756T0/1-873 IQQGGHSVIS AISLPLVDQD GTTKIIINYS LEQPSQLQVV PQNLKKENPV ENSP00000354487/1-1125 IQQGGHSVIS AISLPLVDQD GTTKIIINYS LEQPSQLQVV PQNLKKENPV ENSBTAP00000038655/1-1107 IQQGGHSVIS AISLPLVDQD GTTKIIINYS LEQPSQLQVV PQNLKKETPV 501 550 ENSTTRP00000011188/1-1120 PTNSCKSEKL PEDLTVKSEK DKSFEGGGND STCLLCDDCP GDISALPELK bmy_15756T0/1-873 PTNSCKSEKL PEDLTVKSEK DKSFEGGGND STCLLCDDCP GDISALPELK ENSP00000354487/1-1125 ATNSCKSEKL PEDLTVKSEK DKSFEGGVND STCLLCDDCP GDINALPELK ENSBTAP00000038655/1-1107 PTTNCKSEKL PEDLTVKSEK DKSFEGGGND STCLLCDDCP GDLNALPELK 551 600 ENSTTRP00000011188/1-1120 HYDLKQPAQP HLPPTPEGAK PEASAPSGSG DGSLSPSQPP LKNLLSLLKA bmy_15756T0/1-873 HYDLKQPAQP HLPPTPEAAK PEASAPSGSG DGSLSPSQPP LKNLLSLLKA ENSP00000354487/1-1125 HYDLKQPTQP PPLPAAEAEK PESSVSSATG DGNLSPSQPP LKNLLSLLKA ENSBTAP00000038655/1-1107 HYDLKQPAQP PPPPTPEAAK PEAAASSGSG DGSLSPSQPP LKNLLSLLKA 601 650 ENSTTRP00000011188/1-1120 YYALNAQPSA EELSKIADSV NLPPDVVKKW FEKMQTGQTS VQSSEASSPE bmy_15756T0/1-873 YYALNAQPSA EELSKIADSV NLPPDVVKKW FEKMQTGQTS VQSSEASPPE ENSP00000354487/1-1125 YYALNAQPSA EELSKIADSV NLPLDVVKKW FEKMQAGQIS VQSSEPSSPE ENSBTAP00000038655/1-1107 YYALNAQPSA EELSKIADSV NLPLDVVKKW FEKMQAGQIS VQSSEPSSPE 651 700 ENSTTRP00000011188/1-1120 PGKANIPAKN DDQPQPTNAD ESPDGTRNLQ SPLKITGSPV LPVGSAVNGS bmy_15756T0/1-873 PGKANTPAKN DDQPQPTNAD DSQDGTRNLQ SPLKITSSPV LPVGSAVNGS ENSP00000354487/1-1125 PGKVNIPAKN NDQPQSANAN EPQDSTVNLQ SPLKMTNSPV LPVGSTTNGS ENSBTAP00000038655/1-1107 PGKANTPAKS NDQPQAADAD EAQDSTGNRQ SPLKRASSPV LPGGSAVNGS 701 750 ENSTTRP00000011188/1-1120 RSSASSPSPL NLSSSGNAQG YSYPAEGAQE EPQVEPLDLS LPKQQGELLE bmy_15756T0/1-873 RSSASSPSPL NLSSSGNPQG YSYPAEGAQE EPQVEPLDLS LPKQQGELLE ENSP00000354487/1-1125 RSSTPSPSPL NLSSSRNTQG YLYTAEGAQE EPQVEPLDLS LPKQQGELLE ENSBTAP00000038655/1-1107 RSSASSPSPL NLSSSRSAQG YSYPTEGAQE EPQVEPLDLS LPKQQGELLE 751 800 ENSTTRP00000011188/1-1120 RSTITSVYQN SVYSVQEEPL NLSCAKKEPQ KDSCVTDSEP VVNVIPPSAN bmy_15756T0/1-873 RSTITSVYQN SVYSVQEEPL NLSCAKKEPQ KDSCVTDSEP VVNVIPPSAN ENSP00000354487/1-1125 RSTITSVYQN SVYSVQEEPL NLSCAKKEPQ KDSCVTDSEP VVNVIPPSAN ENSBTAP00000038655/1-1107 RPTITSVYQN SVYSVQEEPL NLSCAKKEPQ KDSCVTDSEP VVNVIPPSAN 801 850 ENSTTRP00000011188/1-1120 PINIAIPTVT AQLPTIVAIA DQNSVPCLRA LAANKQTLLI PQVAYTYSTA bmy_15756T0/1-873 PINIAIPTVT AQLPTIVAIT DQNSVPCLRA LAANKQTILI PQVAYTYSTA ENSP00000354487/1-1125 PINIAIPTVT AQLPTIVAIA DQNSVPCLRA LAANKQTILI PQVAYTYSTT ENSBTAP00000038655/1-1107 PINIAIPTVT AQLPTIVAIA DQNSVPCLRA LAANKQTILI PQVAYTYSTA 851 900 ENSTTRP00000011188/1-1120 VSPAAQEAAL RVAQPNGNQD ERQDTSSEGV SNVEDQNDSD STPPKKKMRK bmy_15756T0/1-873 VSPAVQEASL KVTQPNGNQD ERQDTSSEGV SNVEDQNDSD STPPKKKMRK ENSP00000354487/1-1125 VSPAVQEPPL KVIQPNGNQD ERQDTSSEGV SNVEDQNDSD STPPKKKMRK ENSBTAP00000038655/1-1107 VSPAVQETPL KVIQPSGNQD ERQDTSSEGV SNVEDQNDSD STPPKKKMRK 901 950 ENSTTRP00000011188/1-1120 TENGMYACDL CDKIFQKSSS LLRHKYEHTG KRPHECGICK K-FKHKHHLI bmy_15756T0/1-873 TENGMYACDL CDKIFQKSSS LLRHKYEHTG KRPHECGICK KAFKHKHHLI ENSP00000354487/1-1125 TENGMYACDL CDKIFQKSSS LLRHKYEHTG KRPHECGICK KAFKHKHHLI ENSBTAP00000038655/1-1107 TENGMYACDL CDKIFQKSSS LLRHKYEHTG KRPHECGICK KAFKHKHHLI 951 1000 ENSTTRP00000011188/1-1120 EHTRLHSGEK PYXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15756T0/1-873 EHTRLHSGEK PYQCDKCGKR FSHSGSYSQH MNHRYSYCKR EAE---GPEP ENSP00000354487/1-1125 EHMRLHSGEK PYQCDKCGKR FSHSGSYSQH MNHRYSYCKR EAEERDSTEQ ENSBTAP00000038655/1-1107 EHMRLHSGEK PYQCDKCGKR FSHSGSYSQH MNHRYSYCKR EAEEREPPEP 1001 1050 ENSTTRP00000011188/1-1120 XXXXXXXXXX XXXXXXXXLS QGDSDERESS TREEDEDSDK EEEEEEEERE bmy_15756T0/1-873 GASGPGGPPA HHAGARASPS QGDSDERESS TREEDEDSDK EEEEEEEERE ENSP00000354487/1-1125 EEAGPEILSN EHVGARASPS QGDSDERESL TREEDEDSEK --EEEEEDKE ENSBTAP00000038655/1-1107 GAAGPGVPPE QHAG------ QGDSDERESS TREEDEDSEK EEEEEEEERE 1051 1100 ENSTTRP00000011188/1-1120 MEDLQEEKES GGPQGGEGHE G--------- --EGREGEGR EGEGP-ANSE bmy_15756T0/1-873 TEELQAEKEX XXXXXXXXXX XXXXXXXXXX --XXXXXXXX XXXXXXXXSE ENSP00000354487/1-1125 MEELQEEKEC EKPQGDEEEE EE----EEEV --EEEEVEEA ENEGEEAKTE ENSBTAP00000038655/1-1107 LEELEEEKGS GAARGAEEVE EEVEDGEEEM DDEEDEDEEA EDDGERAETE 1101 1150 ENSTTRP00000011188/1-1120 GAREGAGAGS PAHSLEHKVS QGAEQVSEEK TNEA bmy_15756T0/1-873 GAREGAGAGS PARSLEHKVG QGGEQVSEEK TNEA ENSP00000354487/1-1125 GLMKDDRAES QASSLGQKVG ESSEQVSEEK TNEA ENSBTAP00000038655/1-1107 GVGQGAGAGG QAHSLEHKVS EGSEQVSEEK TNEA