Part of scaffold_1183 (SequenceType object (1))

For more information consult the page for scaffold_1183 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLPTM1ENSTTRG00000008699 (Bottlenosed dolphin)

Gene Details

cleft lip and palate associated transmembrane protein 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000008248, Bottlenosed dolphin)

Protein Percentage 84.15%
cDNA percentage 84.35%
Ka/Ks Ratio 0.15691 (Ka = 0.0343, Ks = 0.2189)

BT.91082ENSBTAG00000020560 (Cow)

Gene Details

cleft lip and palate transmembrane protein 1 homolog

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000027395, Cow)

Protein Percentage 95.33%
cDNA percentage 93.04%
Ka/Ks Ratio 0.05328 (Ka = 0.0245, Ks = 0.4595)

CLPTM1 (Minke Whale)

Gene Details

cleft lip and palate associated transmembrane protein 1

External Links

Gene match (Identifier: BACU018296, Minke Whale)

Protein Percentage 91.84%
cDNA percentage 92.75%
Ka/Ks Ratio 0.17982 (Ka = 0.0492, Ks = 0.2737)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence SequenceType object (2)

Length: 1488 bp    Location:164705..176682   Strand:+
>bmy_15582
ATGAGGGGCTTCACTGTTCCTTGTCCCCGTCGGACCGCCTTGCAGAGCGTCCAGCAGAACGGCTCCATCTATATCCACGTCTACTTCACCAAGAGCGGCTTCCACCCAGACCCCCGGCAGAAGGCGCTGTACCGCCGGCTCGCCACGGTCCACATGTCTCGGATGATCAACAAATACAAGCGCCGGCGGTTTCAGAAAACCAAGAACCTGTTGACAGGAGAGACGGAAGCTGACCCAGAAATGATCAAGAGGGCCGAGGATTATGGGCCTGTGGAGGTGATCTCCCACTGGCACCCCAACATCACCATCAACATTGTGGACGACCACACGCCGTGGGTGAAGGGCAGCGTGCCTCCTCCCCTGGACCAGTATGTGAAGTTTGATGCCGTGAGCGGTGACTACTACCCCATCATCTACTTCAACGACTACTGGAACCTGCAGAAGGACTACTACCCCATCAACGAGAGTCTGGCCAGCCTACCGCTCCGCGTCTCCTTCTGCCCGCTCTCGCTCTGGCGCTGGCAGCTCTACGCCGCCCAGAGCACCAAGTCGCCCTGGAACTTCCTGGGCGACGAGCTGTACGAGCAGTCAGATGAGGAGCAGGACTCGGTGAAGGTTGCCCTCCTGGAGACCAACCCCTACCTGCTGGCGCTCACCATCATCGTGTCCATTGTCCACAGTGTCTTTGAGTTCCTGGCCTTCAAGAACGATATCCAGTTCTGGAACAGCCGGCAGTCCCTGGAGGGCCTGTCCGTGCGCTCCGTCTTCTTTGGCGTCTTCCAGTCTTTCGTGGTCCTCCTCTATATCCTGGACAACGAGACCAACTTCGTGGTCCAGGTCAGCGTCTTCATCGGGGTCCTCATCGACCTCTGGAAGATCACCAAGGTCATGGATGTCCGGCTGGACCGGGAGCGCAAGGTGGCAGGGCTCTTCGCCCGCCCAACCTTCAAAGACAAGTCAACATACGTTGAGTCCTCGACCAAAGTGTATGACGACATGGCGTTCCGGTACCTGTCTTGGATCCTCTTCCCACTCCTGGGCTGCTATGCCGTCTACAGCCTCCTGTACCTGGAGCACAAGGGCTGGTACTCCTGGCTCAAGTCTGTGGCCCACCTGCCCTGGCGCATGCTCACCTACAAGGCCCTCAACACCTTCATTGATGACCTGTTCGCCTTCGTCATCAAGATGCCTGTTATGTACCGGATCGGCTGCCTGCGGGACGATGTGGTCTTCTTCATCTACCTCTACCAACGGTGGATCTACCGCGTCGACCCCACGCGGGTGAACGAGTTTGGCATGAGTGGCGAGGCCCCAACAGCAGCAGGGGCCCTCGCGCCGGCCCCCGCCCCCGCCACGACCACCGCCGCCGCCGCCGCCAGGGAGGAGGCCTCCACACCCCCGCCCGCCAGGCCCACCCAGGGGGCCAGCTCTGACAGCGAGCTCCAGGAAGCCCCTCCAAAGCCGGCAGAGGACAAAAAAAGGGATTAG

Related Sequences

bmy_15582T0 SequenceType object (3)

Length: 496 aa      View alignments
>bmy_15582T0
MRGFTVPCPRRTALQSVQQNGSIYIHVYFTKSGFHPDPRQKALYRRLATVHMSRMINKYKRRRFQKTKNLLTGETEADPEMIKRAEDYGPVEVISHWHPNITINIVDDHTPWVKGSVPPPLDQYVKFDAVSGDYYPIIYFNDYWNLQKDYYPINESLASLPLRVSFCPLSLWRWQLYAAQSTKSPWNFLGDELYEQSDEEQDSVKVALLETNPYLLALTIIVSIVHSVFEFLAFKNDIQFWNSRQSLEGLSVRSVFFGVFQSFVVLLYILDNETNFVVQVSVFIGVLIDLWKITKVMDVRLDRERKVAGLFARPTFKDKSTYVESSTKVYDDMAFRYLSWILFPLLGCYAVYSLLYLEHKGWYSWLKSVAHLPWRMLTYKALNTFIDDLFAFVIKMPVMYRIGCLRDDVVFFIYLYQRWIYRVDPTRVNEFGMSGEAPTAAGALAPAPAPATTTAAAAAREEASTPPPARPTQGASSDSELQEAPPKPAEDKKRD*