Part of scaffold_995 (Scaffold)

For more information consult the page for scaffold_995 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHRNA4 ENSTTRG00000001827 (Bottlenosed dolphin)

Gene Details

cholinergic receptor, nicotinic, alpha 4 (neuronal)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001719, Bottlenosed dolphin)

Protein Percentage 94.66%
cDNA percentage 96.01%
Ka/Ks Ratio 0.10891 (Ka = 0.0227, Ks = 0.2082)

BT.35525 ENSBTAG00000017198 (Cow)

Gene Details

neuronal acetylcholine receptor subunit alpha-4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022855, Cow)

Protein Percentage 89.47%
cDNA percentage 90.68%
Ka/Ks Ratio 0.07467 (Ka = 0.0467, Ks = 0.6256)

CHRNA4  (Minke Whale)

Gene Details

cholinergic receptor, nicotinic, alpha 4 (neuronal)

External Links

Gene match (Identifier: BACU011244, Minke Whale)

Protein Percentage 84.92%
cDNA percentage 88.45%
Ka/Ks Ratio 0.30251 (Ka = 0.0976, Ks = 0.3225)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1878 bp    Location:46210..30193   Strand:-
>bmy_14481
ATGGAGCTCGGGGGCCCGGGGGCGCCGCCGCCGCCGCTGCTGCCGCCGCTGCTGCTGCTGCTGGGGGCCGGCTTCTTGCCTGCCGCGCACCTGCTGGTCCCCGCAGTGAGCAGCCACGTGGAGACCCGGGCCCACGCGGAGGAACGGCTGCTGAAGAAACTCTTCTCTGGCTACAACAAGTGGTCCCGGCCCGTGGCCAACATCTCGGATGTAGTTCTTGTTCACTTCGGCCTGTCTATCGCACAGCTCATTGACGTGGATGAGAAGAACCAGATGATGACGACGAACGTGTGGGTGAAGCAGGAGTGGCATGACTACAAGCTGCGCTGGGACCCCGCTGACTACGAGAACGTGACCTCCATCCGCATCCCCTCTGAGCTCATCTGGCGGCCGGACATCGTCCTGTACAACAACGCGGACGGGGACTTTGCCGTCACCCACCTGACCAAGGCCCACCTCTTTCACGACGGGCGGGTGCAGTGGACACCCCCAGCCATCTACAAGAGCTCCTGCAGCATCGACGTCACCTTCTTCCCCTTCGACCAGCAGAACTGCACCATGAAGTTCGGGTCCTGGACCTATGACAAGGCCAAGATCGACCTGGTGAGCATGCACAGCCGCGTGGACCAGCTGGACTTCTGGGAGAGCGGCGAGTGGGTCATCGTGGACGCCGTGGGCACCTACAACACGCGCAAGTACGAGTGCTGCGCGGAGGTGTACCCGGACATCACGTACGCCTTCGTCATCCGGCGCCTGCCGCTCTTCTACACCGTCAACCTCATCATCCCCTGCCTGCTCATCTCCTGCCTCACGGTGCTCGTCTTCTACCTGCCCTCCGAGTGCGGCGAGAAGATCACGCTCTGCATCTCCGTGCTGCTCTCGCTCACCGTCTTCCTGCTGCTCATCACCGAGATCATCCCGTCCACCTCGCTGGTCATCCCGCTCATCGGCGAGTACCTGCTCTTCACCATGATCTTCGTCACGCTCTCCATCATCATCGCCGTCTTCACGCTCAACGTGCACCACCGCTCCCCGCGCACGCACACCATGCCCGCCTGGGTCCGCCGCGTCTTCCTGGACGTCGTGCCGCGCCTGCTCTTCATGAAGCGGCCGTCCGTGGTCAAGGACAACTGCCGGCGGCTCCTCGAGTCCGTGCACAAGGCGGCCGGGGCCCCGCGCTTCTGGCCGGAGCCCCGGGGGGAGCCCGAGCTCAGGAGTACGGGCCCCGCCCCGTCCCCGACCCCGTCCTGTGGCCCGGACCAGCCGGGCAAGCCCCAGCCGGCCTGCACGTCGCCCTCGGACCAGGCCTCTGCTCTCCAGCCCTCAGAGGCCGAGAAGGCCAGCCCCTGCCCCTCGCCCGGGCCCTGCCGCCCACCAGGGCTCGCCAAGGCCCGGTCCCTGAGCGTCCAGCACGTGTCCGGCCCCAGCGAAGTGGCAGAGGGTGGCGTGAGGTGCCGGTCCCAGAGCATCCAGTACTGCGTGCCCGGAGAAGAGGCCGCCTCCCCAGCCGACCGCCCGGCGGACGGCTCCCCTGCCTCGCTGACCACGGCCCCCTCGGCCGAGCTTCCGCCCCCAGACCAGGCCTCCCCTTGCAAATGCAAGTGCAGGAAGGAGGCGGAGGCACCGAATGCCGCGCTCAAGGCCCCCGGCACCAGAGCGCCACCCCTGCCCCTGTCGCCAGCTCTGGCGCGGGCGGTTGAGGGTGTCCAGTACATTGCAGACCACCTGAAGGCGGAAGACACGGACTTCTCGGTGAAGCAGGACTGGAAGTACGTGGCCATGGTCATCGACCGCATCTTCCTCTGGGTGTTCATCCTCGTCTGCCTGCTGGGGACGGTGGGCCTCTTCCTGCCGCCCTGGCTGGCCGGCATGATCTAG

Related Sequences

bmy_14481T0 Protein

Length: 626 aa      View alignments
>bmy_14481T0
MELGGPGAPPPPLLPPLLLLLGAGFLPAAHLLVPAVSSHVETRAHAEERLLKKLFSGYNKWSRPVANISDVVLVHFGLSIAQLIDVDEKNQMMTTNVWVKQEWHDYKLRWDPADYENVTSIRIPSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQNCTMKFGSWTYDKAKIDLVSMHSRVDQLDFWESGEWVIVDAVGTYNTRKYECCAEVYPDITYAFVIRRLPLFYTVNLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGEYLLFTMIFVTLSIIIAVFTLNVHHRSPRTHTMPAWVRRVFLDVVPRLLFMKRPSVVKDNCRRLLESVHKAAGAPRFWPEPRGEPELRSTGPAPSPTPSCGPDQPGKPQPACTSPSDQASALQPSEAEKASPCPSPGPCRPPGLAKARSLSVQHVSGPSEVAEGGVRCRSQSIQYCVPGEEAASPADRPADGSPASLTTAPSAELPPPDQASPCKCKCRKEAEAPNAALKAPGTRAPPLPLSPALARAVEGVQYIADHLKAEDTDFSVKQDWKYVAMVIDRIFLWVFILVCLLGTVGLFLPPWLAGMI*