Sequence details bmy_14432 (Coding sequence)

Part of scaffold_988 (Scaffold)

For more information consult the page for scaffold_988 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PDGFRB ENSTTRG00000014638 (Bottlenosed dolphin)

Gene Details

platelet-derived growth factor receptor, beta polypeptide

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013882, Bottlenosed dolphin)

Protein Percentage 83.83%
cDNA percentage 85.04%
Ka/Ks Ratio 0.36065 (Ka = 0.0584, Ks = 0.162)

BT.74208 ENSBTAG00000002804 (Cow)

Gene Details

beta-type platelet-derived growth factor receptor precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053664, Cow)

Protein Percentage 84.3%
cDNA percentage 83.73%
Ka/Ks Ratio 0.23276 (Ka = 0.1173, Ks = 0.5041)

PDGFRB  (Minke Whale)

Gene Details

platelet-derived growth factor receptor, beta polypeptide

External Links

Gene match (Identifier: BACU013117, Minke Whale)

Protein Percentage 85.89%
cDNA percentage 88.4%
Ka/Ks Ratio 0.51646 (Ka = 0.1083, Ks = 0.2098)

Additional orthologs identified in other species via the OPTIC pipeline.

PDGFRB (Human)   Pdgfrb (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2853 bp    Location:697294..717695   Strand:+
Raw sequence 
>bmy_14432
ATGCGGCCTCCGAGTGCCATGCAAGCTCCTGTCCTCAAAGGCCAGGTGCTGTTGCTGCCCTTGCTGTTGTTGCTGGGACCACAGGCCTCCTGCGGCCTGGTCGTCACACCCCCGGGGCCAGAGCTTGTCCTCAATCTCTCCAGCACCTTTGTTCTGACCTGCTCGGGTCCAGCTCCAGTGGTGTGGGAACGGATGTCCCAGAAGCCCCCGCAGGAAATGACCACGACCCAGGACGGCACCTTCTCCAGCGTGCTGACACTGACCAATGTCACTGGGCTAGACACAGGAGAATACTTTTGTACCTACAAAGGCTCCCACGGGCTGGAGGCCAGTGAGCGAAAACGGCTCTACATCTTTGTGCCAGTGACGGATCCGAGACTGGTGGTGACGTTGCATGAGAAGAAGGTGGATGTCCCACTGCCCATCGCCTATGACCACCAACGTGGCTTCTCTGTGTCATCCATCAACGTCTCAGTGAATGCGGTGCAGACTGTGGTCCGCCAGGGGGAGAACATCACCATCATGTGCATTGTGACTGGGAATGAGGTGGTCAACTTTGAGTGGACATACCCACGCATGGAGAGTGGGCGGCTGGTGGAGCCAGTGACCGACTTCCTCTTTGAAATGCCCCACATACGTTCTATCCTGCACATCCCCAGCGCCGAGCTGGGAGACTCAGGGACCTACATCTGCAATGTATCAGAAAGTGTGAGCGACCATCGAGATGAAAAGGCCATCAATGTCACCGTGGTCGAGAGCGGTTACGTGCGGCTGCTGGGAGAGCTGGACCCTGTACAATTCGCGGAGCTTCACCGCAGCCGGACACTGCAGGTGGTGTTCGAGGCCTACCCGCCGCCCACTGTCATGTGGTTCAAGGACAACCGGACCCTGGGTGACTCCGGCGCCGGCGAGGTTGCGCTGTCTACGCGCAATGTGTCTGAGACGCGTGCCTGTCCGTGTGCTGGAGCTGAGCGAGAGCCACCCTGCCAGCGGGGAGCAGACAGTCCGCTGTCGTGGCCGGGGCATGCCCCAGCCACACCTCAGCTGGTCTACCTGCAGCGACCTCAAAAGGTGTCCGCTGGAGCTGCCTCCCACGCCGCTGGGGAACAGTTCCGAGGAGGAGAGCCTGCTGGAGACGAACGTGACATACTGGGCAGAGGAGCAGGAGTTCGAGGTGGTGAGCACACTGCGCCTGCGCCGTGTGGATCAGCCGCTGTCAGTGCGCTGCACGCTGCACAACCTCCTGGGCCAAGACGTTCAGGAGGTCACCGTGGTGCCACATTCCCTACCCTTCAAGGTGGTGGTGATCTCGGCAATCCTGGCCTTGGTGGTCCTCACGATCATCTCCCTCATCATCCTCATCATGCTCTGGCAGAAGGACGCACCCTGGGCTCTGGGGCCTTTGGGCAGGTGGTGGAGGCCACGGCTCATGGCCTGAGCCATTCGCAGGCTACCATGAAAGTGGCCGTCAAGATGCTGAAATCCACAGCCCGCAGCAGCGAGAAGCAAGCCCTCATGTCGGAGCTGAAGATCATGAGTCACCTCGGGCCCCACCTGAACGTGGTCAACCTGCTGGGGGCCTGCACTAAAGGAGGGCCCATCTTCATCATCACCGAGTACTGCCGCTACGGCGACCTGGTGGACTACCTGCACCGCAACAAGCACACCTTTCTGCAGCGCTGCTCCAACAAGCGCCGCCCGCCCAGCGCTGAGCTCTACAGCAACGCCCTGCCCGTCGGGCTCCCGCTGCCCAGCCATGTGTCCCTGCCTGGGGAGAGCGATGGTGGCTACATGGACATGAGCAAAGACGAGTCGGTGGACTACGTGCCCATGCTGGACATGAAAGGGGACGTCAAATACGCAGACATCGAGTCCTCCAACTACATGACTCCTTACGATAACTACGTCCCCTCCGCTCCTGAGAGGACCTGCCGGGTGACTTTAATCAACGAGTCCCCAGTGCTTAGCTACATGGATCTTGTGGGCTTCAGCTACCAGGTGGCCAATGGCATGGAGTTCCTGGCCTCCAAGAATGTATGTGTGGTCACAGTGAGCACAGTGGGGTCCTGGGGAGGTGGGTCACCCAGCCAGCCAGGGTGCTCCCAGTACGTGGCCCCGTACGGCATCCCTCTGGTGGGTGAGGACGGCAAATGCCCTCACACCTGGTGGCCCCTCACACCTGAGCAGCGATGCATATTTCCCAAAGCCCCTGACACGGAGAGTCTTTCCCCACAATTGCCCCCCACGTGCGTCCACCGAGATCTGGCAGCCAGGAATGTGCTCATCTGTGAGGGCAAACTGGTCAAGATCTGCGACTTTGGCCTGGCTCGTGACATCATGCGGGATTCGAACTACATCTCCAAAGGCAGTACCTTCCTGCCTCTGAAGTGGATGGCCCCCGAGAGCATCTTCAACAGCCTCTACACCACCCTGAGCGACGTGTGGTCCTTCGGGATCCTGCTCTGGGAGATCTTCACCCTGGGTGGCACCCCGTACCCAGAGCTGCCCATGAACGAGCACTATGAGATCATGCAGAAGTGCTGGGAAGAGAAGTTTGAGATTCGGCCCCCCTTCTCCCAGCTGGTGCTGCTTCTCGAGAGACTGCTGGGCGAGGGTTACAAAAAGCCCAACGAGGGTGACAACGACTATATCATCCCCCTGCCTGACCCCAAACCCGAGGTTGCTGATGAGGGACCACTGGAGGGTTCCCCCAGCCTTGCCAGCCCCCTGGAACCCCAAGAGGAACCAGAGCCAGAGCCCCAGCCTGAGTCCCAGGTGGAGCCAGAGCCCAAGCGGCCGCCGGATTCCAGCTGCCCTGGGCCTCGGGCCGAGGCGGAGGACAGCTTCCTGTAG

Related Sequences

bmy_14432T0 Protein

Length: 951 aa      View alignments
>bmy_14432T0
MRPPSAMQAPVLKGQVLLLPLLLLLGPQASCGLVVTPPGPELVLNLSSTFVLTCSGPAPVVWERMSQKPPQEMTTTQDGTFSSVLTLTNVTGLDTGEYFCTYKGSHGLEASERKRLYIFVPVTDPRLVVTLHEKKVDVPLPIAYDHQRGFSVSSINVSVNAVQTVVRQGENITIMCIVTGNEVVNFEWTYPRMESGRLVEPVTDFLFEMPHIRSILHIPSAELGDSGTYICNVSESVSDHRDEKAINVTVVESGYVRLLGELDPVQFAELHRSRTLQVVFEAYPPPTVMWFKDNRTLGDSGAGEVALSTRNVSETRACPCAGAEREPPCQRGADSPLSWPGHAPATPQLVYLQRPQKVSAGAASHAAGEQFRGGEPAGDERDILGRGAGVRGGEHTAPAPCGSAAVSALHAAQPPGPRRSGGHRGATFPTLQGGGDLGNPGLGGPHDHLPHHPHHALAEGRTLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNVVNLLGACTKGGPIFIITEYCRYGDLVDYLHRNKHTFLQRCSNKRRPPSAELYSNALPVGLPLPSHVSLPGESDGGYMDMSKDESVDYVPMLDMKGDVKYADIESSNYMTPYDNYVPSAPERTCRVTLINESPVLSYMDLVGFSYQVANGMEFLASKNVCVVTVSTVGSWGGGSPSQPGCSQYVAPYGIPLVGEDGKCPHTWWPLTPEQRCIFPKAPDTESLSPQLPPTCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEHYEIMQKCWEEKFEIRPPFSQLVLLLERLLGEGYKKPNEGDNDYIIPLPDPKPEVADEGPLEGSPSLASPLEPQEEPEPEPQPESQVEPEPKRPPDSSCPGPRAEAEDSFL*