Part of scaffold_976 (Scaffold)

For more information consult the page for scaffold_976 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MDM1 ENSTTRG00000006522 (Bottlenosed dolphin)

Gene Details

Mdm1 nuclear protein homolog (mouse)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006169, Bottlenosed dolphin)

Protein Percentage 76.74%
cDNA percentage 78.37%
Ka/Ks Ratio 0.62336 (Ka = 0.017, Ks = 0.0273)

MDM1 ENSBTAG00000019738 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026305, Cow)

Protein Percentage 89.97%
cDNA percentage 93.13%
Ka/Ks Ratio 0.35957 (Ka = 0.0502, Ks = 0.1396)

MDM1  (Minke Whale)

Gene Details

Mdm1 nuclear protein homolog (mouse)

External Links

Gene match (Identifier: BACU016444, Minke Whale)

Protein Percentage 96.83%
cDNA percentage 98.03%
Ka/Ks Ratio 0.5366 (Ka = 0.0163, Ks = 0.0303)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2163 bp    Location:397114..425823   Strand:+
>bmy_14382
ATGCCGGTGCGCTTCAAGGGGTTGAGTGAATACCAGAGAAACTTTATGTGGAAAAAGTCATATTTGTCAGAGTCCTGTAATTCCTCAGTGGGGAGAAGGTACCCATGGGCTGGACTTAGATCAGATCAATTAGGAATCACAAAAGAGCCAAGTTTTATTTCCAAAAGAAGAGTCCCTCACCATGACCCACAGATTTCAAAATCTCTTGAGTGGAATGGAGCTACCTCAGAGAACGCTGTGGTTGTATCACCAGAACCCGAAGCCCCCAGAACACCAGAACCACAGGAAGCAGAACAAAAAGAAGATGTTAACCAAGAAARGGTTCTTGCACTAGACGCCTCCAGGGTTCCCAAGAGAACCAGATCTCACTCTGCAGACTCCAGAGCTGAAGGGGCTTCAGATATTGTGGAAAATAAGGAGGATGTAGTAGCAAATCATGTACCAGTTAATGAAAATGTGGAGCTGGAACATTCTACCAAGCTTCCTTCAGAAAACATAGATGGTGGGTTGGATAGACTTCTACAGAAAAAAGCTGGACTGACTGTTGTTCCTTCACATAATGTCTTGAGAAATTCTGAATATCAAAGGCAGTTTGTTTGGAAGACCCCTAAAGAAACTGCTTCAGCTTTTGCAGCCAATCAGGTTTTCCACAATAAAAGCAAATTTGTTCCACAATTCAAAGGTAACTCAGTCATCCATGAAACTGAATACAAAAGAAATTTTAAGGGTTTATCTCCAGTGAAAGAACCAAAACGAAGAAATCATTTGAAGGAGAACGGAAATTTTGAAACAATATCTCCTGAAAAGAAGTATAATAAAACAGATGATCCTTTAAAATTAGAAGCAGAGATGGAATCAAAAGACTCAAACCAGCCTAAAAAGAAACTTACTCCTTGGAGACATCAAAGGCTTGGGAAGGTGAATTCTGAATATAGAGCAAAATTTCTGAGCCCAGCCCAGTATTTATATAAAGCTGGGACTTGGACACGTGTGAAGGAAAACATACCAAATCAGGGTTCTCTAAATGCCATGTGGTATGCGGAGGTTAAAGAACTCCGAGAGAAGGCTGAGTTTTATAGGAAACGAGTTCAGGGAACTCATTTTTCTCGGGACCATCTGAATCAGATTCTGTCTGAAAACAACCACTGTTGGGATGTCTCCTCGACCACGAGCTCAGAAGGAACCATTAGTAGCAACATTAGAGCACTAGATCTTGCTGGAGATCCTACAAGCCATAAGACTTTGCAGAAATGTCCTTCTACAAAACTAGAAGAAAAAAGACCTATCTTGGAAGAACAGCCCCAGAAAACTACCACAGAGAAATTGGGTGTGTCAGATGCTCCCATACCTGTTAGAAGGCGTCTGGCTTGGGATGCAGAGAACACCACTGAAGACACACAGAAACAGCCAAGAGAGGAGGAGGAAGAGGAGGAAAGGGACAAGCAGGTTAATGTGGGAGAACTAGAGAAGCTGGAAGTACAGGAAAAATCTAAAGCAGACAAGATAAAAGAAGGGTCGGAGTCGTCTTCTGTGTCCTCAGGAAAAGGAGGCAGGCTTCCTACTCCGAAGCTAAGAGAACTTGGTGGAATCCAGAGGACTCATCACGATCTTACCACTCCAGCTGTTGGTGGTGCTGTTTTAGTGTCTCCATCTAAAGTGAAGCCTTCAGTTGCAGAACAGAGAAAAAGAATGTCCTCTCAGGATGGCTTAGAAACTTTGAAGAATGATTTTAGGAAGAAAGAAAGTCGTGCTATATCCCTCCTGACTTCTCCAGCTGCTGGTCTAAAAACAATTGATCCCTTGCCTTTGAGGGAAGATTCTGAACCGAATATCCCCAAATTTGCTGAGACAACTCTTCCAGTTTCAAAAATTCCAGAAAATCCAACTAACACACCCGGGCAGTCTCCATCTCCACCCTGTGCCCCATCCTACTGGCGTCCTTCTCGTCGAATTCAGGGCTCCCTGAGAGATCCAGAATTTCAGCATAATGTGGGAAAATCAAGGATGAACAATTTCCAGTTACCTCAGCAAGAAGCCTTTAATGATGAAGATGAGGACAGATTATCTGAGATTTCTGCTCGCTCTGCAGCTTCTAGTCTCCGGGCTTTTCAAACTCTGGCACGAGCTCAGAGAAGGAAGGAGAATTTCTGGGGCAAAACATAA

Related Sequences

bmy_14382T0 Protein

Length: 721 aa      View alignments
>bmy_14382T0
MPVRFKGLSEYQRNFMWKKSYLSESCNSSVGRRYPWAGLRSDQLGITKEPSFISKRRVPHHDPQISKSLEWNGATSENAVVVSPEPEAPRTPEPQEAEQKEDVNQEXVLALDASRVPKRTRSHSADSRAEGASDIVENKEDVVANHVPVNENVELEHSTKLPSENIDGGLDRLLQKKAGLTVVPSHNVLRNSEYQRQFVWKTPKETASAFAANQVFHNKSKFVPQFKGNSVIHETEYKRNFKGLSPVKEPKRRNHLKENGNFETISPEKKYNKTDDPLKLEAEMESKDSNQPKKKLTPWRHQRLGKVNSEYRAKFLSPAQYLYKAGTWTRVKENIPNQGSLNAMWYAEVKELREKAEFYRKRVQGTHFSRDHLNQILSENNHCWDVSSTTSSEGTISSNIRALDLAGDPTSHKTLQKCPSTKLEEKRPILEEQPQKTTTEKLGVSDAPIPVRRRLAWDAENTTEDTQKQPREEEEEEERDKQVNVGELEKLEVQEKSKADKIKEGSESSSVSSGKGGRLPTPKLRELGGIQRTHHDLTTPAVGGAVLVSPSKVKPSVAEQRKRMSSQDGLETLKNDFRKKESRAISLLTSPAAGLKTIDPLPLREDSEPNIPKFAETTLPVSKIPENPTNTPGQSPSPPCAPSYWRPSRRIQGSLRDPEFQHNVGKSRMNNFQLPQQEAFNDEDEDRLSEISARSAASSLRAFQTLARAQRRKENFWGKT*