Part of scaffold_976 (Scaffold)

For more information consult the page for scaffold_976 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RAP1B ENSTTRG00000015712 (Bottlenosed dolphin)

Gene Details

RAP1B, member of RAS oncogene family

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014888, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.64%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0204)

RAP1B ENSBTAG00000008967 (Cow)

Gene Details

Ras-related protein Rap-1b

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011803, Cow)

Protein Percentage 100.0%
cDNA percentage 97.83%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.109)

RAP1B  (Minke Whale)

Gene Details

RAP1B, member of RAS oncogene family

External Links

Gene match (Identifier: BACU012001, Minke Whale)

Protein Percentage 98.37%
cDNA percentage 98.91%
Ka/Ks Ratio 0.35987 (Ka = 0.0076, Ks = 0.0212)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 609 bp    Location:150224..139157   Strand:-
>bmy_14381
ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCTGGAGGAGTTGGAAAATCTGCTCTGACTGTACAATTTGTTCAAGGAATTTTTGTTGAAAAATATGATCCTACGATAGAAGATTCTTATAGAAAGAAATTTTGTTGTTCCAATATGGTGAAGGGGATGTGGTTATCTAGAGAAATGAAGCAAGTTGAAGTAGATGCACAACAGTGTATGCTTGAAATCTTGGATACTGCAGGAACGGAACAATTTACAGCAATGAGGGATTTGTACATGAAAAACGGACAAGGCTTTGCCTTAGTTTATTCCATCACAGCACAGTCCACATTTAATGATTTACAAGATCTGAGAGAACAGATTCTTCGAGTCAAAGACACTGATGATGTTCCAATGATTCTGGTTGGTAATAAGTGTGACTTGGAAGATGAAAGAGTTGTAGGAAAGGAACAAGGTCAAAATTTAGCAAGACAATGGAACAACTGTGCATTCTTAGAATCCTCTGCAAAATCAAAAATAAATGTTAATGAGATCTTTTATGACCTAGTGCGGCAAATTAACAGAAAAACTCCAGTGCCTGGGAAGGCCCGCAAAAAGTCGTCATGTCAGCTGCTTTAA

Related Sequences

bmy_14381T0 Protein

Length: 203 aa      View alignments
>bmy_14381T0
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKKFCCSNMVKGMWLSREMKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSSCQLL*