KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:44:53 2014  Check: 00 ..

 Name: BACU012001/1-184          Len:    202  Check:  8623  Weight:  1.00
 Name: bmy_14381T0/1-202         Len:    202  Check:  6923  Weight:  1.00
 Name: ENSP00000250559/1-184     Len:    202  Check:  7714  Weight:  1.00
 Name: ENSTTRP00000014888/1-184  Len:    202  Check:  7714  Weight:  1.00
 Name: ENSBTAP00000011803/1-184  Len:    202  Check:  7714  Weight:  1.00

//


                          1                                                   50
BACU012001/1-184          MREYKLVVLG SGGVGKSALT VQFVQGIFVE KYDPTIEDSY R--------- 
bmy_14381T0/1-202         MREYKLVVLG SGGVGKSALT VQFVQGIFVE KYDPTIEDSY RKKFCCSNMV 
ENSP00000250559/1-184     MREYKLVVLG SGGVGKSALT VQFVQGIFVE KYDPTIEDSY R--------- 
ENSTTRP00000014888/1-184  MREYKLVVLG SGGVGKSALT VQFVQGIFVE KYDPTIEDSY R--------- 
ENSBTAP00000011803/1-184  MREYKLVVLG SGGVGKSALT VQFVQGIFVE KYDPTIEDSY R--------- 


                          51                                                 100
BACU012001/1-184          ---------K QVEVDAQQCM LEILDTAGTE QFTAMRDLYM KNGQGFALVY 
bmy_14381T0/1-202         KGMWLSREMK QVEVDAQQCM LEILDTAGTE QFTAMRDLYM KNGQGFALVY 
ENSP00000250559/1-184     ---------K QVEVDAQQCM LEILDTAGTE QFTAMRDLYM KNGQGFALVY 
ENSTTRP00000014888/1-184  ---------K QVEVDAQQCM LEILDTAGTE QFTAMRDLYM KNGQGFALVY 
ENSBTAP00000011803/1-184  ---------K QVEVDAQQCM LEILDTAGTE QFTAMRDLYM KNGQGFALVY 


                          101                                                150
BACU012001/1-184          SITAQSTFND LQDLREQILR VKDTDDVPMI LVGNKCDLED ERVVGKEQGQ 
bmy_14381T0/1-202         SITAQSTFND LQDLREQILR VKDTDDVPMI LVGNKCDLED ERVVGKEQGQ 
ENSP00000250559/1-184     SITAQSTFND LQDLREQILR VKDTDDVPMI LVGNKCDLED ERVVGKEQGQ 
ENSTTRP00000014888/1-184  SITAQSTFND LQDLREQILR VKDTDDVPMI LVGNKCDLED ERVVGKEQGQ 
ENSBTAP00000011803/1-184  SITAQSTFND LQDLREQILR VKDTDDVPMI LVGNKCDLED ERVVGKEQGQ 


                          151                                                200
BACU012001/1-184          NLARQWNNCA FLESSVKSKI NVNEIFYDLV WPINRKTPVP GKARKKSSCQ 
bmy_14381T0/1-202         NLARQWNNCA FLESSAKSKI NVNEIFYDLV RQINRKTPVP GKARKKSSCQ 
ENSP00000250559/1-184     NLARQWNNCA FLESSAKSKI NVNEIFYDLV RQINRKTPVP GKARKKSSCQ 
ENSTTRP00000014888/1-184  NLARQWNNCA FLESSAKSKI NVNEIFYDLV RQINRKTPVP GKARKKSSCQ 
ENSBTAP00000011803/1-184  NLARQWNNCA FLESSAKSKI NVNEIFYDLV RQINRKTPVP GKARKKSSCQ 


                          201                                                250
BACU012001/1-184          LL 
bmy_14381T0/1-202         LL 
ENSP00000250559/1-184     LL 
ENSTTRP00000014888/1-184  LL 
ENSBTAP00000011803/1-184  LL