Part of scaffold_976 (Scaffold)

For more information consult the page for scaffold_976 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NUP107 ENSTTRG00000015713 (Bottlenosed dolphin)

Gene Details

nucleoporin 107kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014889, Bottlenosed dolphin)

Protein Percentage 97.13%
cDNA percentage 97.17%
Ka/Ks Ratio 0.19794 (Ka = 0.0078, Ks = 0.0392)

NUP107 ENSBTAG00000006911 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000042628, Cow)

Protein Percentage 95.58%
cDNA percentage 95.09%
Ka/Ks Ratio 0.13263 (Ka = 0.0207, Ks = 0.1558)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2655 bp    Location:118212..74901   Strand:-
>bmy_14380
ATGGACAGGAGTGACTTTGGAGAGATGTCATCTCCTGTGATCCGGGAGGCAGAGGTGACTCGGACTGCACGAAAACAGAGCGCTCAGAAAAGAGTTTTAATTCGGGCATCCCAAGATGAAATTTTTGCTAATACTACACCAAGAGACCAGGTTATCCCCCGAACTCCCAGCTCATTTCGACAACCTTTAGTTACTCCAACAAACCGAAGCTTACTAAGGCAGCCAGATGTTTTCTGCATTCTTGGAACTGGAGGGAGGTCTCCTCGGCTTACACAGTCTTCGGGGTTCTTGGGAAATCTGTCTATGGTAACTAATCTGGATGACAGTAATTGGGCCGCTGCATTCTCATCACAGCGTGCAGGGCTCTTCACAAACACAGAGCCCCACAGTGTAACAGAGGATGTAACTCTCAGTGCTGTTATGTTACGGGAGGATGATCCTGGAGAAGCTGCATCCATGAGTATGTTTTCTGATTTCCTGCAGTCTTTTTTGAGGCACTCTTCAACTACAGTTTTTGACCTGGTGGAAGAGTATGAAAACATTTGTATTAGTCAGGTGAATATACTGAGTAAAATAGTGAGCCGAGCAACACCTGGACTTCAAAAGTTTTCAAAAACAGCCAGTATGCTCTGGCTTCTTCAGCAGGAGATGGTCACGTGGAGGCTGCTGGCTTCTTTGTATAGAGACAGAATACAGTCTGCATTAGAAGATGAAAGTATGTTTGTAATTACTGCTCTTAATGCCAGTGAAAAAGCAGTTGTGGAAGCATTATTTCAGAGAGATTCACTTGTCCGACAAAGTCAGCTGGTGGTAGATTGGTTGGAGAGCATTGCCAAAGATGAGATTGGAGATTTTTCAGATAATATTGAGTTTTATGCAAAGGAAAATACTCTGCATACCTTGAAACAGCGGCAGCTCTCTTCTTATATAGGAAGTGTCCGTCCTCTTGTCACTGAATTGGCACAGCGACTCTGCAAACGCTGTGGTCAGGCATGGAGAGCTGCAACACTTGAAGGCTGGAAGCTCTATCATGACCCCAATGTTAATGGAGGAACAGAATTAGAACATGTTGAAGGGAATCCATATAGATGCATTTGGAAAATAAGTTGTTGGAGAATGGCAGAAGATGAGCTTTTTAATAGATATGAGAGAGCAATTTATGCAGCTTTAAGTGGGAATCTCAAGCAGCTGCTTCCTGTCTGTGACACCTGGGAAGACACAGTGTGGGCCTACTTTCGGGTGATGGTGGACAGTCTGGTAGAACAGGAGATCCGGACGTCGGTAATAACTCTGGATGAAACTGAAGAACTCCCTAGAGAATATTTGGAAGCAAATTGGACCTTAGAAAAGGTTTTTGAAGAACTTCAAGCTACTGATAAAAAGAGAGTTCTGGAAGAGAATCAAGAACATTATCATATAGTTCAAAAATTCCTTATCCTGGGAGACATTGATGGTCTGATGGAGGAATTTAGCAAATGGCTTTCCAAAAGCAGAAGCAATCTACCTGGACACCTCCTTCGCTTCATGACTCACCTCATTTTGTTTTTCCGCACTCTGGGACTACAGACCAAAGAAGAAGTTTCCATTGAGGTTTTAAAGACGTACATACAGCTTTTAATAAATGAGAAACATACAAATCTCATAGCATTTTATACCTGTCATTTGCCTCAAGACCTCGCTGTTGCCCAGTATGCATTATTTTTGGAAGGTGTTACAGAATTTGAACAGCGCCACCATTGCCTGGAGCTGGCTAAAGAAGCAGATTTGGATATTGCAACTATAACAAAAACTGTAGTTGAGAATATTCGAAAGAAAGATAATGGTGAATTCAGTCATCATGACCTGGCCCCAGCCCTAGATACTGGCACTACTGAGGAGGACCGTTTAAAAATCGATGTAATTGACTGGTTGGTATTTGACCCATCACAGAGGGCGGAAGCACTAAAACAAGGCAATGCCATAATGAGGAAATTCTTGGCATCAAAAAAGCACGAAGCTGCAAAAGAAGTATTTGTGAAAATTCCTCAGGATTCAATAGCAGAAATCTATAACCAGTGGGAGGAACAAGGAATGGAGAGCCCACTTCCTGCTGAAGATGATAACGCTATCCGAGAACATTTGTGCATTAGAGCTTACTTGGAAGCCCATGAAACATTTAATGAGTGGTTTAAGCATATGAATTCAGCTCCACAAAAACCTACTTTGACACCTCAAGCAACTTTTACTGAGAAAGTGGCTCATGAACACAAAGAAAAGAAATATGAAATGGATTATGGTATTTGGAAAGGGCATTTGGATGCCCTAACTGCTGATGTGAAGGAGAAAATGTACAATGTCTTGTTGTTTGTTGATGGAGGGTGGATGGTGGATGTTAGAGAGGATGCTGAGGAAGACCATGAAAGAACATATCAAATGGTTTTACTGAGAAAGCTTTGTCTGCCAATGTTGTGTTTTCTGCTTCACACCATATTGCATAGTACCGGTCAGTATCAGGAATGCCTGCAGTTAGCGGATATGGTATCCTCTGAGCGCCACAAGCTGTATCTGGTGTTTTCTAAGGAAGAACTAAGGAAATTGCTACAGAAGTTAAGAGAATCCTCTCTAATGCTCCTAGACCAGGGACTTGATCCATTAGGATATGAAATTCAGTCATAA

Related Sequences

bmy_14380T0 Protein

Length: 885 aa      View alignments
>bmy_14380T0
MDRSDFGEMSSPVIREAEVTRTARKQSAQKRVLIRASQDEIFANTTPRDQVIPRTPSSFRQPLVTPTNRSLLRQPDVFCILGTGGRSPRLTQSSGFLGNLSMVTNLDDSNWAAAFSSQRAGLFTNTEPHSVTEDVTLSAVMLREDDPGEAASMSMFSDFLQSFLRHSSTTVFDLVEEYENICISQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSALEDESMFVITALNASEKAVVEALFQRDSLVRQSQLVVDWLESIAKDEIGDFSDNIEFYAKENTLHTLKQRQLSSYIGSVRPLVTELAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEHVEGNPYRCIWKISCWRMAEDELFNRYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVITLDETEELPREYLEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMEEFSKWLSKSRSNLPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLINEKHTNLIAFYTCHLPQDLAVAQYALFLEGVTEFEQRHHCLELAKEADLDIATITKTVVENIRKKDNGEFSHHDLAPALDTGTTEEDRLKIDVIDWLVFDPSQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDSIAEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLTPQATFTEKVAHEHKEKKYEMDYGIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEEDHERTYQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKLLQKLRESSLMLLDQGLDPLGYEIQS*