Part of scaffold_975 (Scaffold)

For more information consult the page for scaffold_975 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPH2 ENSTTRG00000006925 (Bottlenosed dolphin)

Gene Details

tryptophan hydroxylase 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006548, Bottlenosed dolphin)

Protein Percentage 99.5%
cDNA percentage 98.17%
Ka/Ks Ratio 0.001 (Ka = 0.0001, Ks = 0.0618)

TPH2 ENSBTAG00000020792 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000027708, Cow)

Protein Percentage 90.46%
cDNA percentage 86.72%
Ka/Ks Ratio 0.14305 (Ka = 0.0666, Ks = 0.4656)

TPH2  (Minke Whale)

Gene Details

tryptophan hydroxylase 2

External Links

Gene match (Identifier: BACU016419, Minke Whale)

Protein Percentage 99.02%
cDNA percentage 99.02%
Ka/Ks Ratio 0.12377 (Ka = 0.0025, Ks = 0.0201)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1230 bp    Location:619802..537475   Strand:-
>bmy_14373
ATGGTTCATATCGAGTCCAGGAAATCCCGGCGAAGAAGTTCAGAAGTTGAAATCTTTGTGGACTGTGAGTGTGGCAAAACGGAATTCAATGAGCTCATTCAGTCGCTGAAATTTCAAACCACGATCGTGACGCTGAATCCGCCAGAGAACATTTGGACAGAGGAAGAAGGCAAGGCCAGTTTCTGCTTGTCGGCAGAGCTAGAGGATGTGCCCTGGTTTCCCCGGAAGATCTCTGAGTTAGACAAATGTTCTCACAGAGTTCTCATGTATGGTTCTGAGCTGGATGCCGATCACCCAGGATTTAAAGACAATGTCTATCGACAGAGAAGGAAGTATTTTGTGGATGTAGCCATGGGTTATAAATATGGTCAGCCCATCCCCARAGTGGAGTACACAGAGGAAGAAACTAAAACTTGGGGCGTTGTGTTCCGAGAGCTCTCCAAACTCTATCCTACTCATGCTTGCCGGGAGTATTTGAAAAACTTCCCTCTGCTGACTAAATACTGTGGCTACAGGGAGGACAACGTGCCCCAACTTGAAGACGTCTCGGTTTTCCTGAAAGAAAGGTCTGGCTTCACCGTGAGACCAGTGGCTGGATACCTGAGTCCTCGAGACTTTCTGGCAGGACTGGCCTACAGAGTGTTCCACTGTACTCAATACATCCGCCATGGCTCGGACCCCCTCTACACCCCGGAACCAGACACATGTCACGAACTCCTGGGACATGTCCCTCTACTTGCAGATCCTAAGTTTGCTCAGTTTTCACAAGAAATAGGCCTGGCATCTCTGGGAGCATCAGATGAAGACGTTCAGAAACTAGCCACATGCTATTTCTTCACTATTGAGTTTGGCCTTTGCAAGCAAGAAGGGCAACTGCGAGCCTATGGAGCTGGACTGCTTTCCTCCATTGGAGAATTAAAGCATGCTCTTTCTGACAAGGCATGTGTGAAAGCCTTTGACCCAAAGACAACTTGCTTACAGGAATGCCTTATCACCACCTTCCAGGAAGCCTACTTTGTTTCAGAAAGTTTTGAAGAAGCCAAAGAAAAGATGAGGGACTTTGCAAAGTCAATTACCCGTCCCTTCTCCGTCTACTTCAATCCCTACACACAGAGTAYTGAAATTCTGAAAGACACCAGGAGCATTGAAAACGTGGTGCAGGACCTCCGCAGCGATTTGAACACCGTGTGTGATGCCTTGAACAAAATGAACCAATATCTGGGAATTTGA

Related Sequences

bmy_14373T0 Protein

Length: 410 aa      View alignments
>bmy_14373T0
MVHIESRKSRRRSSEVEIFVDCECGKTEFNELIQSLKFQTTIVTLNPPENIWTEEEGKASFCLSAELEDVPWFPRKISELDKCSHRVLMYGSELDADHPGFKDNVYRQRRKYFVDVAMGYKYGQPIPXVEYTEEETKTWGVVFRELSKLYPTHACREYLKNFPLLTKYCGYREDNVPQLEDVSVFLKERSGFTVRPVAGYLSPRDFLAGLAYRVFHCTQYIRHGSDPLYTPEPDTCHELLGHVPLLADPKFAQFSQEIGLASLGASDEDVQKLATCYFFTIEFGLCKQEGQLRAYGAGLLSSIGELKHALSDKACVKAFDPKTTCLQECLITTFQEAYFVSESFEEAKEKMRDFAKSITRPFSVYFNPYTQSXEILKDTRSIENVVQDLRSDLNTVCDALNKMNQYLGI*