KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:33:41 2014 Check: 00 .. Name: ENSBTAP00000027708/1-502 Len: 508 Check: 189 Weight: 1.00 Name: ENSP00000329093/1-490 Len: 508 Check: 5279 Weight: 1.00 Name: BACU016419/1-500 Len: 508 Check: 3434 Weight: 1.00 Name: ENSTTRP00000006548/1-497 Len: 508 Check: 5666 Weight: 1.00 Name: bmy_14373T0/1-409 Len: 508 Check: 8647 Weight: 1.00 // 1 50 ENSBTAP00000027708/1-502 MQPAMMMFSS KYWARRGLSL DSAVPEEHQL LTSLT----- -LNKTNSGKN ENSP00000329093/1-490 MQPAMMMFSS KYWARRGFSL DSAVPEEHQL LGSST----- -LNKPNSGKN BACU016419/1-500 MQPAMMMFSS KYWARRGLSL DSAVPEEHLL LGSST----- -LTKTNAGKN ENSTTRP00000006548/1-497 MQPAMMMFSS KYWARRGLSL DSAVPEEHQL LGSITVSTFL KLNKTNAGKN bmy_14373T0/1-409 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000027708/1-502 DDKKGNKGSS KNDTATESGK TAVVFSLKNE VGGLVKALKL FQEKHVNMIH ENSP00000329093/1-490 DD-KGNKGSS KREAATESGK TAVVFSLKNE VGGLVKALRL FQEKRVNMVH BACU016419/1-500 DDKKGNKGSS KSDTATESGK MAVVFSLKNE VGGLVKALKL FQEKHVNMVH ENSTTRP00000006548/1-497 DDKKGNKGSS KSDTATESSK MAVVFSLKNE VGGLVKALKL FQEKHVNMVH bmy_14373T0/1-409 ---------- ---------- ---------- ---------- -------MVH 101 150 ENSBTAP00000027708/1-502 IESRKSRRRS SEVEIFVDCE CGKTEFNELI QSLKFQTTIV TLNPPENIWT ENSP00000329093/1-490 IESRKSRRRS SEVEIFVDCE CGKTEFNELI QLLKFQTTIV TLNPPENIWT BACU016419/1-500 IESRKSRRRS SEVEIFVDCE CGKTEFNELI QSLKFQTTIV TLNPPENIWT ENSTTRP00000006548/1-497 IESRKSRRRS SEVEIFVDCE CGKTEFNELI QSLKFQTTIV TLNPPENIWT bmy_14373T0/1-409 IESRKSRRRS SEVEIFVDCE CGKTEFNELI QSLKFQTTIV TLNPPENIWT 151 200 ENSBTAP00000027708/1-502 EEEGKLTCVA KGKELEDVPW FPRKISELDR CSHRVLMYGS ELDADHPGFK ENSP00000329093/1-490 EEE------- ---ELEDVPW FPRKISELDK CSHRVLMYGS ELDADHPGFK BACU016419/1-500 EEEGK-ASFC LSAELEDVPW FPRKISELDK CSHRVLMYGS ELDADHPGFK ENSTTRP00000006548/1-497 EEE------- ---ELEDVPW FPRKISELDK CSHRVLMYGS ELDADHPGFK bmy_14373T0/1-409 EEEGK-ASFC LSAELEDVPW FPRKISELDK CSHRVLMYGS ELDADHPGFK 201 250 ENSBTAP00000027708/1-502 DNVYRQRRKY FVDVAMGYKY GQPIPRVEYT EEETKTWGVV FRELSKLYPT ENSP00000329093/1-490 DNVYRQRRKY FVDVAMGYKY GQPIPRVEYT EEETKTWGVV FRELSKLYPT BACU016419/1-500 DNVYRQRRKY FVDVAMGYKY GQPIPRVEYT EEETKTWGIV FRELSKLYPT ENSTTRP00000006548/1-497 DNVYRQRRKY FVDVAMGYKY GQPIPRVEYT EEETKTWGVV FRELSKLYPT bmy_14373T0/1-409 DNVYRQRRKY FVDVAMGYKY GQPIPXVEYT EEETKTWGVV FRELSKLYPT 251 300 ENSBTAP00000027708/1-502 HACREYLKNF PLLTKHCGYR EDNVPQLEDV AAFLKERSGF TVRPVAGYLS ENSP00000329093/1-490 HACREYLKNF PLLTKYCGYR EDNVPQLEDV SMFLKERSGF TVRPVAGYLS BACU016419/1-500 HACREYLKNF PLLTKYCGYR EDNVPQLEDV SVFLKERSGF TVRPVAGYLS ENSTTRP00000006548/1-497 HACREYLKNF PLLTKYCGYR EDNVPQLEDV SVFLKERSGF TVRPVAGYLS bmy_14373T0/1-409 HACREYLKNF PLLTKYCGYR EDNVPQLEDV SVFLKERSGF TVRPVAGYLS 301 350 ENSBTAP00000027708/1-502 PRDFLAGLAY RVFHCTQYVR HGSDPLYTPE PDVTLSLLSH VPLIFDDQFP ENSP00000329093/1-490 PRDFLAGLAY RVFHCTQYIR HGSDPLYTPE PDTCHELLGH VPLLADPKF- BACU016419/1-500 PRDFLAGLAY RVFHCTQYIR HGSDPLYTPE PDTCHELLGH VPLLADPKF- ENSTTRP00000006548/1-497 PRDFLAGLAY RVFHCTQYIR HGSDPLYTPE PDTCHELLGH VPLLADPKF- bmy_14373T0/1-409 PRDFLAGLAY RVFHCTQYIR HGSDPLYTPE PDTCHELLGH VPLLADPKF- 351 400 ENSBTAP00000027708/1-502 TSFSNEVGRA VILASWGDKQ ENNQCYFFTI EFGLCKQEGQ LRAYGAGLLS ENSP00000329093/1-490 AQFSQEIGLA SLGASDEDVQ KLATCYFFTI EFGLCKQEGQ LRAYGAGLLS BACU016419/1-500 AQFSQEIGLA SLGASDEDVQ KLATCYFFTI EFGLCKQEGQ LRAYGAGLLS ENSTTRP00000006548/1-497 AQFSQEIGLA SLGASDEDVQ KLATCYFFTI EFGLCKQEGQ LRAYGAGLLS bmy_14373T0/1-409 AQFSQEIGLA SLGASDEDVQ KLATCYFFTI EFGLCKQEGQ LRAYGAGLLS 401 450 ENSBTAP00000027708/1-502 SIGELKHALS DKACVKAFDP KTTCLQECLI TTFQEAYFVS ESFEEAKEKM ENSP00000329093/1-490 SIGELKHALS DKACVKAFDP KTTCLQECLI TTFQEAYFVS ESFEEAKEKM BACU016419/1-500 SIGELKHALS DKACVKAFDP KTTCLQQCLI TTFQEAYFVS ESFEEAKEKM ENSTTRP00000006548/1-497 SIGELKHALS DKACVKAFDP KTTCLQECLI TTFQEAYFVS ESFEEAKEKM bmy_14373T0/1-409 SIGELKHALS DKACVKAFDP KTTCLQECLI TTFQEAYFVS ESFEEAKEKM 451 500 ENSBTAP00000027708/1-502 RDFAKSITRP FSVYFNPYTQ SIEILKDTRS IENVVQDLRS DLNTVCDALN ENSP00000329093/1-490 RDFAKSITRP FSVYFNPYTQ SIEILKDTRS IENVVQDLRS DLNTVCDALN BACU016419/1-500 RDFAKSITRP FSVYFNPYTQ SIEILKDTRS IENVVQDLRS DLNTVCDALN ENSTTRP00000006548/1-497 RDFAKSITRP FSVYFNPYTQ SIEILKDTRS IENVVQDLRS DLNTVCDALN bmy_14373T0/1-409 RDFAKSITRP FSVYFNPYTQ SXEILKDTRS IENVVQDLRS DLNTVCDALN 501 550 ENSBTAP00000027708/1-502 KMNQYLGI ENSP00000329093/1-490 KMNQYLGI BACU016419/1-500 KMNQYLGI ENSTTRP00000006548/1-497 KMNQYLGI bmy_14373T0/1-409 KMNQYLGI