Part of scaffold_984 (Scaffold)

For more information consult the page for scaffold_984 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPFIA1 ENSTTRG00000003146 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002949, Bottlenosed dolphin)

Protein Percentage 80.48%
cDNA percentage 80.82%
Ka/Ks Ratio 0.33577 (Ka = 0.087, Ks = 0.259)

PPFIA1 ENSBTAG00000022188 (Cow)

Gene Details

liprin-alpha-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029933, Cow)

Protein Percentage 88.09%
cDNA percentage 84.24%
Ka/Ks Ratio 0.12159 (Ka = 0.0831, Ks = 0.6836)

Genome Location

Sequence Coding sequence

Length: 2844 bp    Location:136011..92066   Strand:-
>bmy_14357
GAGTTTGCAGCACTTACTAAAGAACTAAATGTATGCAGGGAACAGCTCCTTGAAAGAGAAGAAGAAATCGCTGAACTGAAAGCGGAAAGGAACAACACCAGGGTTAGTAGGGGATTCTCCGTGTTAACATTTGCCTCGGGGTCACGACTGGGCCCCGTGTTGCTGTCTTTAAACTCAGAAGATGATCCACTCTGTCTGTCCTTAAACACGTTTCGACATTTTCCCACTGAGCGGACTGCGCTGCTGCTGGAACATCTGGAGTGCCTGGTCTCGCGGCACGAGCGGTCCCTCAGGATGACGGTGGTGAAGCGGCAGGCGCAGTCCCCGGCAGGCGTGTCCAGCGAGGTGGAAGTGCTTAAAGCGCTGAAGTCCTTATTTGAGCACCACAAAGCCCTGGATGAGAAGGTGAGAGAACGGTTACGAGTAGCACTTGAAAGGTGTAGTTTGTTAGAAGAAGAATTAGGTGCCACACATAAAGAGGCCATGGCCCAGAAGGAAGACATGGAAGAGAGAGTCACTACTCTAGAGAAACGCTACCTCGCAGCACAGCGTGAAGCCACCTCTGTGCACGACCTCAACGATAAACTGGAAAATGAAATTGCAAATAAGGAGTCTATGCATCGACAGGTAGTGAAGCTGCAGCAGACCCTGCGGAGAGCGGAGACCCTCCCCGAGGTGGAGGCGGAGCTGGCCCAGCGGGTGGCCGCGCTCTCCAAGGCCGAAGAGAGACACGGCAACATCGAGGAGAGGCTGCGCCAGATGGAGGCACAGTTGGAGGAGAAGCATCAGGAGCTGCAGCGGGCAAGGCAGAGAGAAAAAATGAATGAAGAACACAATAAACGTTTATCAGACACTGTTGACAAGCTTCTTTCAGAATCTAACGAGAGGCTTCAGCTTCATCTTAAAGAGAGAATGGCAGCTCTGGAAGATAAGGTGCAGACACTGAACGAGCAGGACTGGGAGCGCGCCCAGCAAGCCAGCGTGCTGGCCAGCGTGGCCCAGGCCTTCGAGAGCGACGCGGACGCGTCTGACGGCGAGGGCGACAGGGACACCCTCTTCAGCTCGGCCAGCCTGCTGTCGCCCAGCGGGCAGGCCGACGCCCAGACGCTGGCCATGATGCTTCAGGAGCAGCTGGACGCCATCAACAAGGAGATCCGGTTGATACAAGAAGAAAAGGAGAACACGGAGCAGCGGGCGGAGGAGATTGAGAGCAGGGTGGGCAGTGCGAGCTTAGACAGCCTTGGTCGTTTTCGATCAGTGAGCTCCATCCCCCCGTACCCTGCTTCCTCTCGGGCCAGCTCTTCCCCTCCCAGCAGCGGGCGGCCCACCCCTCGAAGGGCCCCGCACAGCCCGGCGAGGGAAGTGGACAGACTAGGCGTCATGACTCTGCTGCCAGCTTCGCGAGAAGAGGTACGAGACGACAAGACGACCATCAAATGTGAGACCTCGCCCCCCTCCTCCCCGCGGTCCCTTCGGCTGGACCGGCTGCACGCAGGGGCGCTGCACACAGCCAGCCACGAGGACATCAGGGACGCACGCAAGACGCTCCGTGGCTCTCGGATGCGTTCTCGTCCTTTCCGAGCTGTGAAGTGTCCCACCCCATCCTTCCGTGCTCCCCGAGTGCCCCCTCTCAGGAGACCCCAGGCAGCACTCGACGGAGGGCACGCGTGGTCCTCTCTCCAGCGCCGCCGCACGGTGACCATCGCTCTCCTGCCCCGGCGGGGAAGGTCACACTCAGGGTGGCGGGAGGAGCCGCCCTTCCCCGGGGGCCTCTGCGCCTGCTGGGCGGCCACCTGGAGGGGCTCGGGGTGCGCGCTGCACTGCGTGGTCTGGAGCCGGGCCCCACCCTCTCGGGAGGAGAGCTCGCATCGGAGCCTCGGCCCCTCGGGGGCAGCTGCCCGTGGAGCGGAGCCCGCGCCTCCTGTGCGCAGCGCGGCCCGTGAGGCGCGAGCCTTGTGGGGGCTGTGCTTGCGCGAGGCCCCCCCGTTAAAGGTCGTTTTCTGTCCCCAAAGCTCGACAGGCTCGCAGGACGGCCCCGCGAGCAACCCCAGCAGTAGCAACAGCAGCCAGGACTCGCTGCACAAAGCCCCCAAGAAGAAGGGCATCAAGTCCTCTATCGGCCGCTTGTTCGGCAAGAAAGAGAAGGGCCGACCTGGAGCCCTTGGCAAGGAATCGCTGGGACAAGCTGTTATTTCAGAGACAGAAAACTCATCTCAAGATGCCTTGGGACTCAGCAAATTGGGAGGACAGGCTGAAAAAAATCGTAAACTTCAAAAAAAGCATGAATTGCTCGAAGAAGCCCGAAGACAAGGCTTACCCTTTGCACAGTGGGATGGGCCGACTGTTGTCGTCTGGCTGGAGCTCTGGGTCGGGATGCCGGCCTGGTACGTGGCTGCTTGCCGAGCCAACGTGAAGAGCGGGGCCATCATGTCCGCCCTGTCGGACACGGAGATCCAGCGCGAGATCGGCATCAGCAACCCTCTGCACCGGCTGAAGCTGAGGCTGGCGATTCAGGAGATCATGTCCCTGACAAGTCCATCAGCCCCTCCTACGTCAAGAACGCAGACACTGGCATACGGGGACATGAACCACGAGTGGATCGGCAACGAGTGGCTGCCCAGCCTGGGCCTCCCRCAGTACCGGAGCTACTTCATGGAGTGCCTCGTGGACGCGCGGATGCTGGACCACTTGACCAAGAAAGACCTTCGCGGGCAGCTGAAAATGGTTGATAGTTTTCACAGAAACAGTTTCCAGTGTGGAATTATGTGCCTGCGAAGGTTAAATTATGACCGGAAAGAACTGGAAAGAAAGAGAGAAGAAAGCCAGAATGAACTAAAAGGCTAG

Related Sequences

bmy_14357T0 Protein

Length: 948 aa      View alignments
>bmy_14357T0
EFAALTKELNVCREQLLEREEEIAELKAERNNTRVSRGFSVLTFASGSRLGPVLLSLNSEDDPLCLSLNTFRHFPTERTALLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELGATHKEAMAQKEDMEERVTTLEKRYLAAQREATSVHDLNDKLENEIANKESMHRQVVKLQQTLRRAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKHQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKVQTLNEQDWERAQQASVLASVAQAFESDADASDGEGDRDTLFSSASLLSPSGQADAQTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSASLDSLGRFRSVSSIPPYPASSRASSSPPSSGRPTPRRAPHSPAREVDRLGVMTLLPASREEVRDDKTTIKCETSPPSSPRSLRLDRLHAGALHTASHEDIRDARKTLRGSRMRSRPFRAVKCPTPSFRAPRVPPLRRPQAALDGGHAWSSLQRRRTVTIALLPRRGRSHSGWREEPPFPGGLCACWAATWRGSGCALHCVVWSRAPPSREESSHRSLGPSGAAARGAEPAPPVRSAAREARALWGLCLREAPPLKVVFCPQSSTGSQDGPASNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGALGKESLGQAVISETENSSQDALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTQTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQNELKG*