Part of scaffold_984 (Scaffold)

For more information consult the page for scaffold_984 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CTTN ENSTTRG00000004193 (Bottlenosed dolphin)

Gene Details

cortactin

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003948, Bottlenosed dolphin)

Protein Percentage 82.56%
cDNA percentage 87.27%
Ka/Ks Ratio 0.53782 (Ka = 0.127, Ks = 0.2362)

CTTN ENSBTAG00000006071 (Cow)

Gene Details

src substrate cortactin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007976, Cow)

Protein Percentage 93.15%
cDNA percentage 91.2%
Ka/Ks Ratio 0.07178 (Ka = 0.0321, Ks = 0.4475)

CTTN  (Minke Whale)

Gene Details

cortactin

External Links

Gene match (Identifier: BACU003576, Minke Whale)

Protein Percentage 96.95%
cDNA percentage 97.53%
Ka/Ks Ratio 0.27763 (Ka = 0.017, Ks = 0.0612)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1812 bp    Location:69098..36054   Strand:-
>bmy_14355
ATGGAGGGGGAGGGGCCCGGGGCTGCGGGCAGGAAGGCGGAGGAGAGGGACCAGAGGCGGAGGGGTCCGGGGGTTTTGGGGTCCCAGGCAAAGGTGCCTGCGTCAGCCTCTGTAACTGCGGCGCTGCTCTTCCAGATGTGGAAAGCCTCGGCCGGCCACACCGTGTCCATCACCCAGGACGACGCGGGAGCCGACGACTGGGAAACCGACCCTGATTTCGTGAATGATGTAAGTGAAAAAGAGCAGCGATGGGGGGCCAAAACCGTCCAGGGGTCTGGGCACCAGGAACACATCAACATACACAAGCTGAGAGAGAATGTGTTTCAAGAACACCAGACCCTCAAGGAGAAGGAGCTCGAAACGGGACCCAAAGCCTCGCACGGCTACGGAGGGAAGTTTGGTGTGGAGCAGGACAGAATGGACAAATCAGCTGTCGGCCATGAGTATCAGTCGAAGCTTTCCAAGCACTGCTCGCAGGTCGACTCCGTCCGGGGGTTTGGAGGCAAGTTTGGTGTCCAGGTGGACAGAGTTGATCAGTCTGCTGTGGGCTTTGAGTACCAGGGGAAAACTGAGAAACACGCCTCGCAGAAAGACTACTCGAGCGGTTTCGGTGGCAAGTACGGCGTGCAGTCTGACCGCGTGGACAAGAGCGCGGTGGGCTTCGACTACCAGAGCAAGACGGAGAAGCACGAGTCGCAGAGAGATTACTCCAGAGGTTTTGGTGGCAAGTACGGTATCGACAAGGACAAGGTGGATAAGAGCGCGGTCGGCTTTGAGTATCGAGGCAGAACCGAGAAGCACGAGTCCCAGAAAGACTACGTGAAAGGCTTTGGAGGGAAGTTCGGTGTGCAGACAGACAGACAGGACAAGTGTGCCCTTGGCTGGGATCACCAGGAGAAGCTGCATCTGCACGAATCCCAAAAAGCGTGGGCAGGGCCCCGGAGAGACTCCCGGAGCACGGAGCGGCTTTTCCGAATCGGCTCAAATACAGTTGCTCACCTGCTTTCGGGCCTGGGCTGCGTGTTCAGACGCTATTATAAGACTGGTTTCGGAGGCAGATTTGGTGTTCAGTCCGAGAGGCAGGACCCCTGTGCTGTGGGCTTTGATTACAAGGAGAGACTGGCCAAGCACGAGTCCCAGCAAGGCACAGTTGCTCCCCGGCTCCCCCCAGCCCCGCCCAGTGCCGCCACTTCTAGCACAGACTTCAGGGCTCAGCCTCCGAACTACTCCAGAGGCTTCGGTGGGAAATACGGGGTGCAGAAGGACCGGATGGATAAGAACGCTTCCACCTTTGAGGATGTTGCCACGGTGGCCTCCACTTATCAGAAGACTGTCCCTGTCGAAGCAGTGAGCAACAAGACCAGCAACATCAGAGCTAACTTTGAAAACCTGGCGAAGGAGAAGGAGCACGAGGACGGGCGGAAGGCGGAGGCAGAGCGGGCGCAGAGGACGGCAAAGGGGCAGGAGGCGGCGCGGAGGCAGCTGGACGAGCAAGCCCGGGCCCAGAAGCCCACGCCCCCCGCGTCGCCCACGCCCCAGCCGGCCCAGGAGAGGCCGCCTTCGAGCCCCGTCTGCGAGGTTGGTGCTTTTATCCGCTTTGCCCAGGAGGGTCCCTACGATGAATATGAGAACGACCTTGGAATCACAGCCATTGCCCTCTACGACTACCAAGCTGCGGGTGATGATGAGATCTCCTTCGACCCCGACGACATCATCACCAACATCGAGATGATTGACGATGGCTGGTGGCGCGGGCTGTGCAAGGGCAGGTATGGGCTCTTCCCCGCCAACTACGTCGAGCTGCGGCAGTAG

Related Sequences

bmy_14355T0 Protein

Length: 604 aa      View alignments
>bmy_14355T0
MEGEGPGAAGRKAEERDQRRRGPGVLGSQAKVPASASVTAALLFQMWKASAGHTVSITQDDAGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQEHINIHKLRENVFQEHQTLKEKELETGPKASHGYGGKFGVEQDRMDKSAVGHEYQSKLSKHCSQVDSVRGFGGKFGVQVDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQSDRVDKSAVGFDYQSKTEKHESQRDYSRGFGGKYGIDKDKVDKSAVGFEYRGRTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEKLHLHESQKAWAGPRRDSRSTERLFRIGSNTVAHLLSGLGCVFRRYYKTGFGGRFGVQSERQDPCAVGFDYKERLAKHESQQGTVAPRLPPAPPSAATSSTDFRAQPPNYSRGFGGKYGVQKDRMDKNASTFEDVATVASTYQKTVPVEAVSNKTSNIRANFENLAKEKEHEDGRKAEAERAQRTAKGQEAARRQLDEQARAQKPTPPASPTPQPAQERPPSSPVCEVGAFIRFAQEGPYDEYENDLGITAIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRGLCKGRYGLFPANYVELRQ*