KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:33:42 2014 Check: 00 .. Name: ENSP00000365745/1-634 Len: 838 Check: 2486 Weight: 1.00 Name: ENSBTAP00000007976/1-538 Len: 838 Check: 5003 Weight: 1.00 Name: ENSTTRP00000003948/1-456 Len: 838 Check: 1591 Weight: 1.00 Name: BACU003576/1-558 Len: 838 Check: 9702 Weight: 1.00 Name: bmy_14355T0/1-603 Len: 838 Check: 1167 Weight: 1.00 // 1 50 ENSP00000365745/1-634 ---------- ---------- ---------- ---------- -----MWKAS ENSBTAP00000007976/1-538 ---------- ---------- ---------- ---------- -----MWKAS ENSTTRP00000003948/1-456 ---------- ---------- ---------- ---------- -----MWKAS BACU003576/1-558 ---------- ---------- ---------- ---------- -----MWKAS bmy_14355T0/1-603 MEGEGPGAAG RKAEERDQRR RGPGVLGSQA KVPASASVTA ALLFQMWKAS 51 100 ENSP00000365745/1-634 AGHAVSIAQD DAGADDWETD PDFVNDVSEK EQRWGAKTVQ GSGHQEHINI ENSBTAP00000007976/1-538 AGHTVSITPD DGGADDWETD PDFVNDVSEK EQRWGAKTVQ GSGHQEHINI ENSTTRP00000003948/1-456 AGHTVSITQD DAGADDWETD PDFVNDVSEK EQRWGAKTVQ GSGHQEHINI BACU003576/1-558 AGHTVSITQD DAGADDWETD PDFVNDVSEK EQRWGAKTVQ GSGHQEHINI bmy_14355T0/1-603 AGHTVSITQD DAGADDWETD PDFVNDVSEK EQRWGAKTVQ GSGHQEHINI 101 150 ENSP00000365745/1-634 HKLRENVFQE HQTLKEKELE TGPKASHGYG GKFGVEQDRM DKSAVGHEYQ ENSBTAP00000007976/1-538 HKLRENVFQE HQTLKEKELE TGPKASHGYG GKFGVEQDRM DKSAVGHEYQ ENSTTRP00000003948/1-456 HKLRENVFQE HQTLKEKELE TGPRASHGYG GKFGVEQDRM DRSAVGHEYQ BACU003576/1-558 HKLRENVFQE HQTLKEKELE TGPKASHGYG GKFGVEQDRM DKSAVGHEYQ bmy_14355T0/1-603 HKLRENVFQE HQTLKEKELE TGPKASHGYG GKFGVEQDRM DKSAVGHEYQ 151 200 ENSP00000365745/1-634 SKLSKHCSQV DSVRGFGGKF GVQMDRVDQS AVGFEYQGKT EKHASQKDYS ENSBTAP00000007976/1-538 SKLSKHCSQV DSVRGFGGKF GVQVDRVDQS AVGFEYQGKT EKHASQKDYS ENSTTRP00000003948/1-456 SKLSKHCSQV DSVRGFGGKF GVQVDRVDQS AVGFEYQGKT EKHASQKDYS BACU003576/1-558 SKLSKHCSQV DSVRGFGGKF GVQVDRVDQS AVGFEYQGKT EKHASQKDYS bmy_14355T0/1-603 SKLSKHCSQV DSVRGFGGKF GVQVDRVDQS AVGFEYQGKT EKHASQKDYS 201 250 ENSP00000365745/1-634 SGFGGKYGVQ ADRVDKSAVG FDYQGKTEKH ESQRDYSKGF GGKYGIDKDK ENSBTAP00000007976/1-538 SGFGGKYGVQ SDRVDKSAVG FDYQGETEKH GSQRDYSRGF GGKYGIDKDK ENSTTRP00000003948/1-456 SGFGGKYGVQ SDRVDKSAVG FDYQSKTEKH ESQRDYSKGF GGKYGIDKDK BACU003576/1-558 SGFGGKYGVQ SDRVDKSAVG FDYQSKTEKH ESQRDYSRGF GGKYGIDKDK bmy_14355T0/1-603 SGFGGKYGVQ SDRVDKSAVG FDYQSKTEKH ESQRDYSRGF GGKYGIDKDK 251 300 ENSP00000365745/1-634 VDKSAVGFEY QGKTEKHESQ KDYVKGFGGK FGVQTDRQDK CALGWDHQEK ENSBTAP00000007976/1-538 VDKSAVGFEY QGKTEKHESQ KDYVKGFGGK FGVQTDRQDK CALGWDHQEK ENSTTRP00000003948/1-456 VDKSAVGFEY QGKTEKHESQ KDYVKGFGGK FGVQTDRQDK CALGWDHQEK BACU003576/1-558 VDKSAVGFEY RGRTEKHESQ KDYVKGFGGK FGVQTDRQDK CALGWDHQEK bmy_14355T0/1-603 VDKSAVGFEY RGRTEKHESQ KDYVKGFGGK FGVQTDRQDK CALGWDHQEK 301 350 ENSP00000365745/1-634 LQLHESQK-- ---------- ---------- ---------- ---------- ENSBTAP00000007976/1-538 PQLHESQKD- ---------- ---------- ---------- -----YKTGF ENSTTRP00000003948/1-456 LHLHESQK-- ---------- ---------- ---------- ---------- BACU003576/1-558 LHLHESQK-- ---------- ---------- ---------- ---------- bmy_14355T0/1-603 LHLHESQKAW AGPRRDSRST ERLFRIGSNT VAHLLSGLGC VFRRYYKTGF 351 400 ENSP00000365745/1-634 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000007976/1-538 GGRFGVQSER QDSCAVGFDY KEKLAKHGSQ Q--------- ---------- ENSTTRP00000003948/1-456 ---------- ---------- ---------- ---------- ---------- BACU003576/1-558 ---------- ---------- ---------- ---------- ---------- bmy_14355T0/1-603 GGRFGVQSER QDPCAVGFDY KERLAKHESQ QGTVAPRLPP APPSAATSST 401 450 ENSP00000365745/1-634 -------DYS KGFGGKYGVQ KDRMDKNAST FEDVTQVSSA YQKTVPVEAV ENSBTAP00000007976/1-538 -------DYS KGFGGKYGVQ KDRMDKNAST FEDVAAVSSS YQKTVPVEAV ENSTTRP00000003948/1-456 -------DYS RGFGGKYGVQ KDRMDKNAST FEDVATVAPT YQKTVPVEAV BACU003576/1-558 -------DYS RGFGGKYGVQ KDRMDKNAST FEDVATVAST YQKTVPVEAV bmy_14355T0/1-603 DFRAQPPNYS RGFGGKYGVQ KDRMDKNAST FEDVATVAST YQKTVPVEAV 451 500 ENSP00000365745/1-634 TSKTSNIRAN FENLAKEKEQ EDRRKAEAER AQRMAKERQE QEEARRKLEE ENSBTAP00000007976/1-538 NSKTSNIRAN FENLAKEKEQ EDRRKAEAER AQRMAQERQE QEAARRQLDE ENSTTRP00000003948/1-456 SSKTSDIRAN FENLAREKEH EDRRQAEAER AQRMARQQRE QQAARRQLDE BACU003576/1-558 SSKTSNIRAN FENLAKEKEP EDGWKAEAER AQRTAK---G QEAARRQLDE bmy_14355T0/1-603 SNKTSNIRAN FENLAKEKEH EDGRKAEAER AQRTAK---G QEAARRQLDE 501 550 ENSP00000365745/1-634 QARAKTQTPP VSPAPQPTEE RLPSSPVYED AASFKAELSY RGPVSGTEPE ENSBTAP00000007976/1-538 QARAQKPTPP ASPTPQPAQE RPPSSPVYED AAPFRAEPSP SR-----EPE ENSTTRP00000003948/1-456 QARAQKPTPP ASPTPQPAQE RLPSSPVREA AAPFQAEPSH TG-----EPE BACU003576/1-558 QAQAQKPPPP ASPTPPPAQE RPPSSPVCEA AAPLQAEPSY TG-----EPE bmy_14355T0/1-603 QARAQKPTPP ASPTPQPAQE RPPSSPVCEV GAFIRF---- ---------- 551 600 ENSP00000365745/1-634 PVYSMEAADY REASSQQGLA YATEAVYESA EAPGHYPAED STYDEYENDL ENSBTAP00000007976/1-538 LGYSVETTEY PE-------A YVSEGVYEST EAPGHYRAEE GTYDEYENDL ENSTTRP00000003948/1-456 PVYSTEATEY RE-------A YDPEAVYEST EAPGHYQAEE GTYGEYENDL BACU003576/1-558 PVYSTEATEY QE-------A YAPEAVYEST EAPGHYQAEE GPYDEYENDL bmy_14355T0/1-603 ---------- ---------- ---------- -------AQE GPYDEYENDL 601 650 ENSP00000365745/1-634 GITAVALYDY QAA------- ---------- ---------- ---------- ENSBTAP00000007976/1-538 GITAIALYDY QAA------- ---------- ---------- ---------- ENSTTRP00000003948/1-456 GITAIALYDY QA-------- ---------- ---------- ---------- BACU003576/1-558 GITAIALYDY QAAGDDEISF DPDDIITNIE MIDAAEPCTP RRTLHPQDPA bmy_14355T0/1-603 GITAIALYDY QAA------- ---------- ---------- ---------- 651 700 ENSP00000365745/1-634 ---------- ---------- ---GDDEISF DPDDIITNIE MIDDGWWRGV ENSBTAP00000007976/1-538 ---------- ---------- ---GDDEISF DPDDIITNIE MIDDGWWRGL ENSTTRP00000003948/1-456 ---------- ---------- ---------- ---------- ---------- BACU003576/1-558 PPGPCTPRTL HPPQNPALPW SLTGDDEISF DPDDIITNIE MIDDGWWRGL bmy_14355T0/1-603 ---------- ---------- ---GDDEISF DPDDIITNIE MIDDGWWRGL 701 750 ENSP00000365745/1-634 CKGRFRELAF SCVRVALVPI KCSRDLPGQA RGLRSALWRV GRKDCPRRGA ENSBTAP00000007976/1-538 CKGRY----- ---------- ---------- ---------- ---------- ENSTTRP00000003948/1-456 ---------- ---------- ---------- ---------- ---------- BACU003576/1-558 CKGRY----- ---------- ---------- ---------- ---------- bmy_14355T0/1-603 CKGRY----- ---------- ---------- ---------- ---------- 751 800 ENSP00000365745/1-634 SSRVSLLGRR GLGLMEVNPE LSHPEHRSCH VRWEICLCHT VTARRIRKLI ENSBTAP00000007976/1-538 ---------- --GLFPAN-- ---------- ---------- ---------- ENSTTRP00000003948/1-456 ---------- ---------- ---------- ---------- ---------- BACU003576/1-558 ---------- --GLFPAN-- ---------- ---------- ---------- bmy_14355T0/1-603 ---------- --GLFPAN-- ---------- ---------- ---------- 801 850 ENSP00000365745/1-634 SFLRSREAGP VPSCSQVGGV SFQKVTWKCL GTWVPECP ENSBTAP00000007976/1-538 -YVELRQ--- ---------- ---------- -------- ENSTTRP00000003948/1-456 ---------- ---------- ---------- -------- BACU003576/1-558 -YVELRQ--- ---------- ---------- -------- bmy_14355T0/1-603 -YVELRQ--- ---------- ---------- --------