Part of scaffold_977 (Scaffold)

For more information consult the page for scaffold_977 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SPG7 ENSTTRG00000004355 (Bottlenosed dolphin)

Gene Details

spastic paraplegia 7 (pure and complicated autosomal recessive)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004108, Bottlenosed dolphin)

Protein Percentage 88.92%
cDNA percentage 89.09%
Ka/Ks Ratio 0.22321 (Ka = 0.0363, Ks = 0.1624)

SPG7 ENSBTAG00000012041 (Cow)

Gene Details

paraplegin

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000032431, Cow)

Protein Percentage 87.03%
cDNA percentage 87.47%
Ka/Ks Ratio 0.17951 (Ka = 0.0758, Ks = 0.4225)

SPG7  (Minke Whale)

Gene Details

spastic paraplegia 7 (pure and complicated autosomal recessive)

External Links

Gene match (Identifier: BACU004273, Minke Whale)

Protein Percentage 87.04%
cDNA percentage 89.49%
Ka/Ks Ratio 0.43759 (Ka = 0.0921, Ks = 0.2104)

Genome Location

Sequence Coding sequence

Length: 1971 bp    Location:390920..360754   Strand:-
>bmy_14302
ATGGCGGCTGCGTGCCTGCTGCTGCGCGCTCTCCGCCTGGGTCCCGGGCCAGGGCCAGGGCCTGGGCGGCTGCGGGGCCCCTACTCTGGCTGGAGCCCAGGCAGCTCCGCCAAGACCGGGTGGAGGTGGCCGTATGTTGTCCACAGGCCTCTGATGGGTGTCGTCGGGCCTGGAGGCCGAGTCCTGCAGAGTTTCCAGTTGCGACTGCTCACCCCTACGTTTGAAGGAATCAGCAGATTGTTGGTGAAACAGCATCTCGTCCAGAATCCAGTCGGACTCTGGAAACTTCTAGGTGTGTATCTTTTGAAGACAGAGGTGACAGGCAGAGCCTATGGCATTTCCCTGCCGTTGTCCACACACTGTGGCTGGGGCACCGTTCTCTGTCCTCAGGGTCAGCGGTCTGGCCTGTTCATCACTCGCGGTCCCTCTGCTTTCTGCCCCCAGCGGCTGGCCTTGATGTACCGAATGCAGGTGGCAAATATCGACAAATTTGAAGAGAAGCTTCGAGCAGCTGAGGATGAGCTGAATATCGAAGGCAAGGACAGAATTCCGGTTTCCTATAAGCGGACGGGATTCTTTGGAAACGCCCTCTACGCCCTGGGGATGACAGCCGTGGGCCTGGCCATCCTGTGGTATGTTTTCCGTCTGGCTGGAATGACAGGACGGGAAGGCGGATTCAGTGCTTTTAATCAGCTTAAAATGGCTCGCTTCACGATTGTGGATGGCAAGACGGGGAAAGGAGTCAGCTTCAAAGATGTGGCAGGAATGCATGAGGCCAAGCTGGAGGTCAAGGAGTTTGTGGATTATCTGAAGAGCCCAGAGCGCTTCCTCCAGCTCGGAGCCAAGGTCCCGAAGGGCGCGCTGCTGCTCGGCCCCCCCGGCTGCGGGAAGACGCTGCTGGCCAAGGCGGTGGCCACAGAGGCCCAGGTGCCCTTCCTGGCGATGGCTGGCTCGGAGTTCGTAGAGGTCATTGGAGGCCTCGGCGCGGCCCGCGTGCGGAGCCTCTTCAAGGAAGCCCGCGCCCGGGCCCCCTGCATTGTGTACATCGACGAGATCGACGCCGTGGGCAAGAGGCGCTCCACCACCGTGTCCGGCTTCTCCAACACGGAGGAGGAGCAGACGCTCAACCAGCTGCTCGTGGAGATGGACGGAATGGGCACCACCGACCATGTCATCGTCCTTGCGGCCACCAACCGAGCTGACATTTTGGACAACGCTTTGCTGAGGCCAGGCCGACTGGACCGACACGTGTTCATCGACCTTCCCACACTGCAGGTGTCCATCGCGCCGCGGACCAACGCAGCCCTGGGCTTCACTCAGATTCTCCCGAGAGACCAGCACCTCTTCACCAGGGAGCAGCTGTTTGAGCGGATGTGCATGGCCCTGGGCGGCCGCGCGTCCGAGTCCATCTCCTTCAACAGGGTCACTTCCGGGGCGCAGGACGACCTGAGGAAGGTCACGCGCATCGCCTACTCCATGGTGAAGCAGTTCGGGATGGCGCCCAGCATCGGGCCTATCTCCTTCCCTGAGGCCCAGGATGGCGTCCCAGGCATCGGACGGCGTCCCTTCAGCCAGGGCCTCCAGCAGATGATGGACCATGAAGCGAGGCTGCTGGTGGCCGCGGCCTACAGGCACACCGAGAAGGTGCTTCGGGACAACCTGGACAAGCTGCAGGCGCTGGCGAACGCCCTGCTGGAAAAGGAAGTGATAAACTACGAGGACATCGAGGCCCTCATTGGCCCGCCCCCCCATGGGCCCAAGAAGAGGATTGCGCCGCAGAGGTGGAGCGACGCCCAGAGGGAGAAGGCGGAGGCGGAGGAGGCGGAGGCGGGGGAGGCGGAGGCGGAGGCGGCCGGCAGCAGCCCCTGCAGGGGGAGGAGCCGTCCTGGCCCTGGTAGCTGGACCACCTTGCTGGCCGCTGGAGCCGGTCCCTCCTCTCAGCCCTCGCTGGTCTCAGCTCAAGGCCCCTGA

Related Sequences

bmy_14302T0 Protein

Length: 657 aa      View alignments
>bmy_14302T0
MAAACLLLRALRLGPGPGPGPGRLRGPYSGWSPGSSAKTGWRWPYVVHRPLMGVVGPGGRVLQSFQLRLLTPTFEGISRLLVKQHLVQNPVGLWKLLGVYLLKTEVTGRAYGISLPLSTHCGWGTVLCPQGQRSGLFITRGPSAFCPQRLALMYRMQVANIDKFEEKLRAAEDELNIEGKDRIPVSYKRTGFFGNALYALGMTAVGLAILWYVFRLAGMTGREGGFSAFNQLKMARFTIVDGKTGKGVSFKDVAGMHEAKLEVKEFVDYLKSPERFLQLGAKVPKGALLLGPPGCGKTLLAKAVATEAQVPFLAMAGSEFVEVIGGLGAARVRSLFKEARARAPCIVYIDEIDAVGKRRSTTVSGFSNTEEEQTLNQLLVEMDGMGTTDHVIVLAATNRADILDNALLRPGRLDRHVFIDLPTLQVSIAPRTNAALGFTQILPRDQHLFTREQLFERMCMALGGRASESISFNRVTSGAQDDLRKVTRIAYSMVKQFGMAPSIGPISFPEAQDGVPGIGRRPFSQGLQQMMDHEARLLVAAAYRHTEKVLRDNLDKLQALANALLEKEVINYEDIEALIGPPPHGPKKRIAPQRWSDAQREKAEAEEAEAGEAEAEAAGSSPCRGRSRPGPGSWTTLLAAGAGPSSQPSLVSAQGP*