Part of scaffold_971 (Scaffold)

For more information consult the page for scaffold_971 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POGK ENSTTRG00000015778 (Bottlenosed dolphin)

Gene Details

pogo transposable element with KRAB domain

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014952, Bottlenosed dolphin)

Protein Percentage 99.34%
cDNA percentage 97.97%
Ka/Ks Ratio 0.0316 (Ka = 0.0028, Ks = 0.0901)

POGK ENSBTAG00000010775 (Cow)

Gene Details

pogo transposable element with KRAB domain

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000046628, Cow)

Protein Percentage 97.86%
cDNA percentage 93.91%
Ka/Ks Ratio 0.033 (Ka = 0.01, Ks = 0.3034)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1827 bp    Location:700792..685165   Strand:-
>bmy_14260
ATGGAGTCCACAGCCTACCCTCTCAATTTGACCCTGAAAGAAGAGGAGGAAGAAGAAGAGATTCAGAGCCGGGAACTGGAGGATGGCCCCACAGATATGCAGAAAGTCCGAATCTGCTCAGAGGGCGGATGGGTGCCAGCCCTATTCGATGAGGTGGCCATATATTTTTCCGATGAGGAGTGGGAAGTTTTGACGGAGCAACAAAAGGCCCTCTACCGGGAGGTCATGAGGATGAATTATGAAACTGTCCTGTCCCTGGAATTCCCATTCCCTAAGCCCGACATGATCACTCGGTTGGAAAGGGAGGAGGAGTCTCAGAATTCTGACGAGTGGCAGTTCCAGGGAGGAACCTTTGCAGAAAATGAAGAATCTGACGTGAAGCCCCCAGATTGGGTGGGCCCGATGAACACGGCCTCCCAGTTTCCCCAGCCTCAGCACCTGGACAGCTATGGCCTCCGTCTGCCTCGGGACATCACAGAGCTGCCCGAGTGGGGCGAGGGGTACCCCTTCTACATGGCCATGGGCTTCCCCGGGTATGACCTCTCAGCAGACGACCTGGCCGGGAAGTTTCAGTTCAGCCGGGGCATGCGCCGCAGTTACGACGCAGGGTTCAAGTTAATGGTGGTGGAGTACGCCGAGAGCACCAACAACTGCCAGGCGGCCAAGCAGTTCGGGGTGCTGGAAAAAAACGTCCGCGACTGGCGCAAAGTGAAGCCGCAGCTGCAGAACGCCCACGCCATGCGGCGTGCCTTCCGGGGCCCCAAAAACGGGCGCTTCGCCCTGGTGGACCAGCGCGTGGCCGAGTACGTTCGATACATGCAGGCCAAAGGGGACCCCATCACCAGGGAGGCCATGCAGCTGAAAGCTCTGGAGATCGCCCAGGAGATGAACATTCCGGAGAAAGGGTTCAAGGCCAGCTTGGGCTGGTGTCGAAGAATGATGCGAAGGTATGACTTGTCTCTGCGGCATAAGGTGCCGGTGCCCCAGCAGCTGCCGGAAGACCTGACCGAGAAGCTGGTCACCTACCAGCGGAGCGTCCTGGCTCTGCGCAGGGCACACGACTACCAGGTGGCTCAGATGGGAAATGCTGATGAGACGCCCATTTGCTTAGAGGTACCCTCGAGGGTGACTGTGGACAACCAGGGTGAAAAGCCCGTCTTGGTCAAGACGCCAGGCAGGGAGAAACTGAAAATCACAGCCATGCTTGGTGTCTTGGCAGATGGGAGGAAGTTACCTCCGTACATCATTCTGAGGGGCACATACATCCCCCCCGGGAAGTTCCCCAGTGGCATGGAAATCCGTTGTCATCGGTACGGATGGATGACGGAGGACTTGATGCAGGACTGGTTGGAAGTGGTGTGGAGGCGGAGAACCGGTGCAGTGCCCAAGCAGCGAGGGATGCTGATCCTGAACGGCTTCCGGGGCCACGCCACTGATTCGGTGAAGAGCTCCATGGAAAGCATGAACACCGATATGGTCATCATCCCGGGGGGCCTGACCTCGCAGCTGCAGGTGTTGGATGTGGTGGTCTACAAACCCCTGAATGACAGTGTCCGGGCCCAGTACTCCAACTGGCTCCTGGCGGGGAACCTGGCACTGAGCCCCACGGGGAATGCCAAGAAGCCGCCCCTTGGCCTCTTTCTGGAGTGGGTCATGGTGGCGTGGAATAGCATCTCAAGCGAATCCATCGTCCAGGGGTTCAAGAAGTGCCACATCTCCAGCAACTTGGAGGACGAGGATGACGTCCTGTGGGAAATCGAGAGCGAGCTGCCAGGAGGGGAACCGCCCAAAGAGTGTGACACTGAGAGCCTGACAGAGAGCAACTGA

Related Sequences

bmy_14260T0 Protein

Length: 609 aa      View alignments
>bmy_14260T0
MESTAYPLNLTLKEEEEEEEIQSRELEDGPTDMQKVRICSEGGWVPALFDEVAIYFSDEEWEVLTEQQKALYREVMRMNYETVLSLEFPFPKPDMITRLEREEESQNSDEWQFQGGTFAENEESDVKPPDWVGPMNTASQFPQPQHLDSYGLRLPRDITELPEWGEGYPFYMAMGFPGYDLSADDLAGKFQFSRGMRRSYDAGFKLMVVEYAESTNNCQAAKQFGVLEKNVRDWRKVKPQLQNAHAMRRAFRGPKNGRFALVDQRVAEYVRYMQAKGDPITREAMQLKALEIAQEMNIPEKGFKASLGWCRRMMRRYDLSLRHKVPVPQQLPEDLTEKLVTYQRSVLALRRAHDYQVAQMGNADETPICLEVPSRVTVDNQGEKPVLVKTPGREKLKITAMLGVLADGRKLPPYIILRGTYIPPGKFPSGMEIRCHRYGWMTEDLMQDWLEVVWRRRTGAVPKQRGMLILNGFRGHATDSVKSSMESMNTDMVIIPGGLTSQLQVLDVVVYKPLNDSVRAQYSNWLLAGNLALSPTGNAKKPPLGLFLEWVMVAWNSISSESIVQGFKKCHISSNLEDEDDVLWEIESELPGGEPPKECDTESLTESN*