KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:42 2014 Check: 00 .. Name: BACU004234/1-278 Len: 609 Check: 2274 Weight: 1.00 Name: ENSP00000356849/1-609 Len: 609 Check: 8117 Weight: 1.00 Name: ENSBTAP00000046628/1-609 Len: 609 Check: 8178 Weight: 1.00 Name: bmy_14260T0/1-608 Len: 609 Check: 7624 Weight: 1.00 Name: ENSTTRP00000014952/1-609 Len: 609 Check: 9948 Weight: 1.00 // 1 50 BACU004234/1-278 MESTAYPLNM TLKEEEEEEE IQSRELEDGP TDMQKVRICS EGGWVPALFD ENSP00000356849/1-609 MESTAYPLNL SLKEEEEEEE IQSRELEDGP ADMQKVRICS EGGWVPALFD ENSBTAP00000046628/1-609 MASTACPLNL TLKEEEEEEE IQSRELEDGP TDMQKVRICS EGGWVPALFD bmy_14260T0/1-608 MESTAYPLNL TLKEEEEEEE IQSRELEDGP TDMQKVRICS EGGWVPALFD ENSTTRP00000014952/1-609 MESTAYPLNL TLKEEEEEEE IQSRELEDGP TDMQKVRICS EGGWVPALFD 51 100 BACU004234/1-278 EVAIYFSDEE WEVLTEQQKA LYREVMRMNY ETVLSLEMES TAYPLNMTLK ENSP00000356849/1-609 EVAIYFSDEE WEVLTEQQKA LYREVMRMNY ETVLSLEFPF PKPDMITRLE ENSBTAP00000046628/1-609 EVAIYFSDEE WEVLTEQQKA LYREVMRMNY ETVLSLEFPF PKPDMITRLE bmy_14260T0/1-608 EVAIYFSDEE WEVLTEQQKA LYREVMRMNY ETVLSLEFPF PKPDMITRLE ENSTTRP00000014952/1-609 EVAIYFSDEE WDVLTEQQKA LYREVMRMNY ETVLSLEFPF PKPDMITRLE 101 150 BACU004234/1-278 EEEEEEEIQS RELEDGPTDM QKVRICSEGG WV-------- ---PALFDEV ENSP00000356849/1-609 GEEESQNSDE WQLQGGTSAE NEESDVKPPD WPNPMNATSQ FPQPQHFDSF ENSBTAP00000046628/1-609 REEESQNSDE WQLQGGTFAE KEESDMKPPD WAGPMNVASQ FPQAQHLDGF bmy_14260T0/1-608 REEESQNSDE WQFQGGTFAE NEESDVKPPD WVGPMNTASQ FPQPQHLDSY ENSTTRP00000014952/1-609 REEESQNSDE WQFQGGTFAE NEESDVKPPD WVGPMNTASQ FPQPQHLDGY 151 200 BACU004234/1-278 AIYFSDE--- --EWE----- ---------- ---------- ---------- ENSP00000356849/1-609 GLRLPRDITE LPEWSEGYPF YMAMGFPGYD LSADDIAGKF QFSRGMRRSY ENSBTAP00000046628/1-609 GLRLPRDITE LPEWGEGYPF YMAMGFPGYD LSADDLAGKF QFSRGMRRSY bmy_14260T0/1-608 GLRLPRDITE LPEWGEGYPF YMAMGFPGYD LSADDLAGKF QFSRGMRRSY ENSTTRP00000014952/1-609 GLRLPRDITE LPEWGEGYPF YMAVGFPGYD LSADDLAGKF QFSRGMRRSY 201 250 BACU004234/1-278 ---------- ---------- ---------- ---------- ---------- ENSP00000356849/1-609 DAGFKLMVVE YAESTNNCQA AKQFGVLEKN VRDWRKVKPQ LQNAHAMRRA ENSBTAP00000046628/1-609 DAGFKLMVVE YAESTNNCQA AKQFGVLEKN VRDWRKVKPQ LQNAHAMRRA bmy_14260T0/1-608 DAGFKLMVVE YAESTNNCQA AKQFGVLEKN VRDWRKVKPQ LQNAHAMRRA ENSTTRP00000014952/1-609 DAGFKLMVVE YAESTNNCQA AKQFGVLEKN VRDWRKVKPQ LQNAHAMRRA 251 300 BACU004234/1-278 ---------V LTEQQKALY- ---------- -REVMRMN-- ---------- ENSP00000356849/1-609 FRGPKNGRFA LVDQRVAEYV RYMQAKGDPI TREAMQLKAL EIAQEMNIPE ENSBTAP00000046628/1-609 FRGPKNGRFA LVDQRVAEYV RYMQAKGDPI TREAMQLKAL EIAQEMNIPE bmy_14260T0/1-608 FRGPKNGRFA LVDQRVAEYV RYMQAKGDPI TREAMQLKAL EIAQEMNIPE ENSTTRP00000014952/1-609 FRGPKNGRFA LVDQRVAEYV RYMQAKGDPI TREAMQLKAL EIAQEMNIPE 301 350 BACU004234/1-278 ---------- ------YETV LSLEFPFPK- -PDMITR--- --------LE ENSP00000356849/1-609 KGFKASLGWC RRMMRRYDLS LRHKVPVPQH LPEDLTEKLV TYQRSVLALR ENSBTAP00000046628/1-609 KGFKASLGWC RRMMRRYDLS LRHKVPVPQQ LPEDLTEKLV TYQRSVLALR bmy_14260T0/1-608 KGFKASLGWC RRMMRRYDLS LRHKVPVPQQ LPEDLTEKLV TYQRSVLALR ENSTTRP00000014952/1-609 KGFKASLGWC RRMMRRYDLS LRHKVPVPQQ LPEDLTEKLV TYQRSVLALR 351 400 BACU004234/1-278 REEESQ---- -NSDEWQF-- ---------- QG-------- ---------- ENSP00000356849/1-609 RAHDYEVAQM GNADETPICL EVPSRVTVDN QGEKPVLVKT PGREKLKITA ENSBTAP00000046628/1-609 RAHDYQVAQM GNADETPICL EVPSRVTVDN QGEKPVLVKT PGREKLKITA bmy_14260T0/1-608 RAHDYQVAQM GNADETPICL EVPSRVTVDN QGEKPVLVKT PGREKLKITA ENSTTRP00000014952/1-609 RAHDYQVAQM GNADETPICL EVPSRVTVDN QGEKPVLVKT PGREKLKITA 401 450 BACU004234/1-278 ---------- --------GT FA-------- ---------- -ANEL---YL ENSP00000356849/1-609 MLGVLADGRK LPPYIILRGT YIPPGKFPSG MEIRCHRYGW MTEDLMQDWL ENSBTAP00000046628/1-609 MLGVLADGRK LPPYIILRGT YIPPGKFPSG MEIRCHRYGW MTEDLMQDWL bmy_14260T0/1-608 MLGVLADGRK LPPYIILRGT YIPPGKFPSG MEIRCHRYGW MTEDLMQDWL ENSTTRP00000014952/1-609 MLGVLADGRK LPPYIILRGT YIPPGKFLSG MEIRCHRYGW MTEDLMQDWL 451 500 BACU004234/1-278 EQLRRKILKK IPHSVDTQGA AG-RGHGAQN ---------- -----SPGLD ENSP00000356849/1-609 EVVWRRRTGA VPKQRGMLIL NGFRGHATDS VKNSMESMNT DMVIIPGGLT ENSBTAP00000046628/1-609 EVVWRRRTGA VPKQRGLLIL NGFRGHATDS VKSSMESMNT DMVIIPGGLT bmy_14260T0/1-608 EVVWRRRTGA VPKQRGMLIL NGFRGHATDS VKSSMESMNT DMVIIPGGLT ENSTTRP00000014952/1-609 EVVWRRRTGA VPKQRGMLIL NGFRGHATDS VKSSMESMNT DMVIIPGGLT 501 550 BACU004234/1-278 SSLSILSWDA AHPRPTSMRC QKS------- ---------- ---LGPF--- ENSP00000356849/1-609 SQLQVLDVVV YKPLNDSVRA QYSNWLLAGN LALSPTGNAK KPPLGLFLEW ENSBTAP00000046628/1-609 SQLQVLDVVV YKPLNDSVRA QYSNWLLAGN LALSPTGNAK KPPLGLFLEW bmy_14260T0/1-608 SQLQVLDVVV YKPLNDSVRA QYSNWLLAGN LALSPTGNAK KPPLGLFLEW ENSTTRP00000014952/1-609 SQLQVLDVVV YKPLNDSVRA QYSNWLLAGN LALSPTGNAK KPPLGLFLEW 551 600 BACU004234/1-278 -------TSS ET-------- ---------- ---------- ---------- ENSP00000356849/1-609 VMVAWNSISS ESIVQGFKKC HISSNLEEED DVLWEIESEL PGGGEPPKDC ENSBTAP00000046628/1-609 VMVAWNNISS ESIVQGFKKC HISSNLEDED DVLWEIESEL PGGGEPPKEC bmy_14260T0/1-608 VMVAWNSISS ESIVQGFKKC HISSNLEDED DVLWEIESEL P-GGEPPKEC ENSTTRP00000014952/1-609 VMVAWNSISS ESIVQGFKKC HISSNLEDED DVLWEIESEL PGGGEPPKEC 601 650 BACU004234/1-278 --------- ENSP00000356849/1-609 DTESMAESN ENSBTAP00000046628/1-609 DTESLTESH bmy_14260T0/1-608 DTESLTESN ENSTTRP00000014952/1-609 DTESLTESN