Part of scaffold_971 (Scaffold)

For more information consult the page for scaffold_971 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

POU2F1 ENSTTRG00000008532 (Bottlenosed dolphin)

Gene Details

POU class 2 homeobox 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008087, Bottlenosed dolphin)

Protein Percentage 70.6%
cDNA percentage 73.64%
Ka/Ks Ratio 0.75633 (Ka = 0.1286, Ks = 0.1701)

BT.39352 ENSBTAG00000024534 (Cow)

Gene Details

POU domain, class 2, transcription factor 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000034020, Cow)

Protein Percentage 85.98%
cDNA percentage 86.46%
Ka/Ks Ratio 0.37913 (Ka = 0.1082, Ks = 0.2853)

POU2F1  (Minke Whale)

Gene Details

POU class 2 homeobox 1

External Links

Gene match (Identifier: BACU004241, Minke Whale)

Protein Percentage 84.3%
cDNA percentage 87.74%
Ka/Ks Ratio 0.85084 (Ka = 0.1305, Ks = 0.1533)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1527 bp    Location:189462..132861   Strand:-
>bmy_14252
ATGAACAATCCGTCAGAAACCAGTAAACCATCTATGGAGAGTGGAGATGGCAACACAGTTATGCCCAATGGTTGCCCGACTTTCTGTGAACTTCATTTGGAATTTGTGCTACTTATCAAGTTATATTATTTTGCTTGCTTTCTAGGCACACAAACCAATGGTCTGGACTTTCAGAAGCAGCCTGTGCCTGTTGGAGGAGCAATCTCAACAGCCCAGGCCCAGGCTTTCCTTGGACATCTCCATCAGCTGACTTTGACGCCAGCCCAGCAACAGTTATTACTACAGCAGGCACAGGCACAGGCACAGCTGCTGGCTGCTGCAGTGCAACAGCATTCCGCCAGCCAACAGCACAGTGCTGCTGGGGCCACCATCTCAGCCTCCGCCGCCACGCCCATGACTCAGATCCCCCTGTCTCAGCCCATCCAGATCGCACAGGGCAAAGTATCCAGAGATAATAAAAGTTTATTTAAGAGGCATAGACAGTTCTACCAAGGAGGAAAAAAGGATCTGCAACAACTGCAACAACTTCAGCAGCAGAATCTCAACCTGCAACAGTTTGTGTTGGTACATCCAACCACCAACCTGCAACCAGCGCAGTTTATCATCTCACAGACGCCCCAGGGCCAGCAGGGTCTCCTGCAAGCGCAAAATCTTTTAACGCAACTACCTCAGCAAAGCCAAGCCAACCTCCTACAGTCGCAGCCAAGCATCACCCTCACCTCCCAGCCAGCCACCCCAACACGCACAATAGCAGCAACCCCAATTCAGACACTTCCACAGAGCCAGTCAACGCCAAAGCGAATTGATACTCCCAGCTTGGAGGAGCCCAGTGACCTTGAGGAGCTTGAGCAATTTGCCAAGACCTTCAAACAAAGACGAATCAAACTTGGATTCACTCAGGGCGATGTTGGGCTCGCTATGGGTAAACTGTATGGAAATGACTTCAGCCAAACTACCATCTCTCGTTTTGAAGCCTTGAACCTCAGCTTTAAGAACATGTGCAAGTTAAAGCCACTTTTGGAGAAGTGGCTAAATGATGCAGAGAACCTCTCATCTGATTCGGCTCTCTCCAGCCCAAGTGCCCTGAATTCTCCAGGGATGGGAATTGAGGGCTTGAACCGTAGGAGGAAGAAACGCACCAGCATAGAGACCAACATCCGTGTGGCCTTAGAGAAGAGTTTCTTGGAGAATCAAAAGCCTACCTCGGAAGAGATCACCATGATTGCTGATCAACTTAATATGGAAAAGGAGGTGATACGTGTTTGGTTTTGTAACCGCCGCCAGAAAGAAAAAAGAATCAACCCACCGAGCAGTGGTGGGACCAGCAGCTCACCTATCAAAGCAATTTTCCCCAGCCCGACCTCACTGGTGGCAACCACGCCAAGCCTTGTGACAAGCAGCGCAGCAACTACCCTCACAGTCAATCCAGTCCTTCCTTTAACCAGTGCTGCGGTAACTAATCTCTCTGTTACAGGTAAGCAGCAGCCAGGCCGTGCAGCTGTTAGGCAAATGATAGGCCCATGCTAA

Related Sequences

bmy_14252T0 Protein

Length: 509 aa      View alignments
>bmy_14252T0
MNNPSETSKPSMESGDGNTVMPNGCPTFCELHLEFVLLIKLYYFACFLGTQTNGLDFQKQPVPVGGAISTAQAQAFLGHLHQLTLTPAQQQLLLQQAQAQAQLLAAAVQQHSASQQHSAAGATISASAATPMTQIPLSQPIQIAQGKVSRDNKSLFKRHRQFYQGGKKDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSALSSPSALNSPGMGIEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPSPTSLVATTPSLVTSSAATTLTVNPVLPLTSAAVTNLSVTGKQQPGRAAVRQMIGPC*