Sequence detailsbmy_14246 (Coding sequence)

Part of scaffold_986 (SequenceType object (1))

For more information consult the page for scaffold_986 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PCDH7ENSTTRG00000000724 (Bottlenosed dolphin)

Gene Details

protocadherin 7

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000682, Bottlenosed dolphin)

Protein Percentage 97.68%
cDNA percentage 97.35%
Ka/Ks Ratio 0.23975 (Ka = 0.0159, Ks = 0.0663)

PCDH7ENSBTAG00000000061 (Cow)

Gene Details

protocadherin-7 precursor

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000000069, Cow)

Protein Percentage 97.39%
cDNA percentage 94.65%
Ka/Ks Ratio 0.07989 (Ka = 0.0164, Ks = 0.2055)

Additional orthologs identified in other species via the OPTIC pipeline.

Pcdh7 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3246 bp    Location:582427..566196   Strand:-
Raw sequence 
>bmy_14246
ATGCTGAGGATGCGGACCATGGGATGGGCGCGCGCCTGGTGCCTGGGCTGCTGTCTCCTCTTGCCGCTCTCGCTAAGCCTGGCGGCCGCCAAGCAACTCCTCCGGTACCGACTGGCCGAGGAGGGCCCAGCGGACGTCCGCATCGGCAACGTCGCCTCGGACTTGGGCATCGTGACCGGCTCCGGTGAGGTGACTTTCAGCCTCGAGTCGGGYTCGGAGTACCTGAAGATCGACAACCTCACCGGCGAGCTGAGTACCAGCGAGCGGCGCATCGACCGCGAGAAGCTACCCCAGTGTCAGATGATCTTCGACGAAAACGAGTGCTTCCTGGACTTCGAGGTGTCGGTGATCGGGCCCTCGCAGAGCTGGGTGGACCTGTTCGAGGGTCGGGTCATCGTGCTCGACATCAACGACAACACGCCCACCTTCCCGTCGCCCGTGCTCACGCTCACGGTGGAGGAGAACCGGCCAGTGGGCACTCTCTACCTGCTGCCCACTGCCACCGACCGTGATTTCGGCCGCAACGGCATCGAACGCTACGAGCTGCTCCAGGAGCCCGGAGGCGGCGGCGGCGGCGGCGGCGAGGGCCGGCGCGCCGGGCCTGCAGACAGCGCCCCCTACCCCGGGGGCGGCGGGAACGGCGCGAGCGGCGGCGGCCCGGGTGGTTCCAAGAGGCGGCTGGACGCGCCAGAGGGCGGCGGCGGGACCAGCACCGGCGGCCGCAGCAGCGTGTTCGAACTGCAGGTGGCCGACACCCCGGATGGCGAAAAGCAGCCGCAGCTGATCGTGAAGGGGGCGCTGGACCGCGAACAGCGAGACTCCTACGAGTTGACCCTGCGTGTGCGCGACGGTGGCGACCCGCCTCGCTCCTCCCAGGCCATCCTGCGGGTGCTCATCACAGACGTGAACGACAACAGTCCCCGCTTCGAGAAGAGCGTGTACGAGGCTGACCTGGCGGAGAACAGCGCCCCGGGGACTCCCATCCTGCAGCTGCGTGCCGCCGACCTGGACGTGGGGGTCAACGGGCAGATCGAGTACGTGTTCGGGGCGGCTACCGAGTCCGTGCGGCGCCTGCTGCGCCTCGACGAGACGTCCGGCTGGCTCAGTGTCCTGCACCGTATCGACCGCGAGGAAGTGAACCAGCTGCGCTTCACCGTCATGGCCCGCGATCGCGGGCAGCCCCCCAAGACCGACAAGGCCACGGTGGTCCTTAATATCAAGGACGAGAACGACAATGTGCCGTCCATTGAAATCCGCAAGATCGGGCGTATCCCACTAAAGGACGGGGTGGCCAACGTGGCCGAGGACGTTCTGGTCGACACCCCCATCGCCCTGGTACAGGTGTCTGACCGAGACCAAGGCGAGAACGGAGTGGTCACCTGCACCGTGGTGGGCGATGTGCCCTTCCAACTCAAGCCGGCCAGTGACACAGAGGGCGACCAGAACAAGAAGAAGTACTTCCTGCACACCTCGGCCCCTTTGGACTATGAGACCACCCGGGAGTTCAACGTGGTCATAGTGGCGGTGGACTCGGGCAGTCCCAGCCTCTCCAGCAACAACTCCCTGATTGTCAAGGTGGGAGACACCAACGACAACCCGCCCGTCTTCGGCCAGTCGGTGGTGGAGGTATACTTTCCCGAGAACAACATCCCCGGCGAGAGGGTAGCCACGGTGCTGGCGACAGACGCAGACAGCGGGAAAAACGCTGAAATCGCCTACTCGCTGGACTCTTCCGTGATGGGGATCTTTGCCATCGACCCCGATTCTGGGGACATCCTCGTCAATACGGTGCTGGACCGCGAGCAGACTGACAGGTATGAGTTTAAAGTTAACGCCAAAGACAAAGGCATCCCGGTGCTACAGGGCAGCACCACAGTGATTGTGCAGGTGGCTGACAAGAATGACAATGACCCTAAGTTTATGCAGGACGTCTTTACCTTTTATGTGAAAGAAAATTTGCAGCCCAACAGTCCCGTGGGAATGGTCACAGTGATGGATGCTGACAAGGGGCGCAATGCGGAGATGAGTCTGTACATAGAGGAGAACAGTAACATTTTTTCCATTGAAAATGACACGGGGACCATTTACTCCACAATGTCTTTTGACCGGGAACATCAGACCACATACACATTCAGAGTCAAGGCTGTGGATGGGGGAGATCCTCCCAGATCCGCAACAGCCACAGTCTCTCTCTTTGTGATGGATGAGAATGACAATGCCCCCACAGTTACCCTTCCCAGAAATGTTTCCTACACTTTACTGCCACCTTCAAGTAATGTCAGGACAGTAGTAGCTACGGTGTTGGCAAGAGACAGCGATGATGGCATCAATGCAGACCTTAACTACAGCATTGTGGGAGGGAATCCCTTCAAGCTGTTTGAGATTGATTCCACCAGTGGTGTAGTTTCCTTAGTGGGAAAACTCACCCAAAAGCATTATGGCTTGCACAGATTGGTGGTGCAAGTGAATGACAGTGGGCAGCCTTCCCAGTCTACCACGACTCTGGTGCATGTGTTTGTCAATGAAAGTGTTTCTAATGCAACTGTGATTGACTCCCAGATAGCCAGAAGTTTGCACACCCCACTCACCCAGGATATAGCCGGTGACCCAAGCTATGAAATAAGCAAACAGAGACTCAGTATTGTCATTGGGGTGGTTGCTGGAATTATGACGGTGATTCTAATCATCTTAATTGTAGTGATGGCAAGATACTGCCGGTCCAAAAATAAAAATGGCTATGAAGCCGGCAAAAAAGATCACGAAGACTTTTTTACACCCCAACAGCATGACAAATCTAAAAAGCCTAAAAAGGACAAGAGAAACAAAAAATCTAAGCAACCTCTCTACAGCAGCATTGTCACTGTAGAAGCTTCTAAACCAAATGGACAGAGGTATGATAGTGTCAATGAGAAGCTGTCAGACAGCCCAAGCATGGGCCGATACCGATCAGTTAACGGTGGGCCTGGCAGTCCTGACCTGGCCAGGCATTACAAATCTAGTTCCCCATTGCCTACTGTCCAGCTTCACCCCCAATCACCAACTGCAGGAAAAAAACACCAGGCCGTACAAGATCTACCACCAGCTAACACATTTGTGGGAGCAGGAGACAACATTTCAATTGGATCAGATCACTGCTCTGAGTACAGCTGTCAAACCAATAACAAGTACAGCAAACAGATTGGCTCCAAAAGGCAGCCCTTTAGATGTGTTCTTGGCACCGATGAAAAATTGGTACAGTTGCTATAG

Related Sequences

bmy_14246T0 SequenceType object (3)

Length: 1082 aa      View alignments
>bmy_14246T0
MLRMRTMGWARAWCLGCCLLLPLSLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTGSGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPSQSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERYELLQEPGGGGGGGGEGRRAGPADSAPYPGGGGNGASGGGPGGSKRRLDAPEGGGGTSTGGRSSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITDVNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKIGRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQNKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLIVKVGDTNDNPPVFGQSVVEVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGIFAIDPDSGDILVNTVLDREQTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGMVTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDPPRSATATVSLFVMDENDNAPTVTLPRNVSYTLLPPSSNVRTVVATVLARDSDDGINADLNYSIVGGNPFKLFEIDSTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVNESVSNATVIDSQIARSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVVMARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKRNKKSKQPLYSSIVTVEASKPNGQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQIGSKRQPFRCVLGTDEKLVQLL*