KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:10:16 2014 Check: 00 .. Name: BACU007662/1-1071 Len: 1257 Check: 2753 Weight: 1.00 Name: bmy_14246T0/1-1081 Len: 1257 Check: 6911 Weight: 1.00 Name: ENSP00000441802/1-1255 Len: 1257 Check: 6080 Weight: 1.00 Name: ENSTTRP00000000682/1-1200 Len: 1257 Check: 8389 Weight: 1.00 Name: ENSBTAP00000000069/1-1203 Len: 1257 Check: 4694 Weight: 1.00 // 1 50 BACU007662/1-1071 MLRMRTMGWA RAWCLGCCLL LPLSLSLAAA KQLLRYRLAE EGPADVRIGN bmy_14246T0/1-1081 MLRMRTMGWA RAWCLGCCLL LPLSLSLAAA KQLLRYRLAE EGPADVRIGN ENSP00000441802/1-1255 MLRMRTAGWA RGWCLGCCLL LPLSLSLAAA KQLLRYRLAE EGPADVRIGN ENSTTRP00000000682/1-1200 MLRMRTMGWA RAWCLGCCLL LPLSVSLAAA KQLLRYRLAE EGPADVRIGN ENSBTAP00000000069/1-1203 MLRMRTMGWA RAWCLGCCLL LPLSLSLAAA KQLLRYRLAE EGPADVRIGN 51 100 BACU007662/1-1071 VASDLGIVTG SGEVTFSLES GSEYLKIDNL TGELSTSERR IDREKLPQCQ bmy_14246T0/1-1081 VASDLGIVTG SGEVTFSLES GSEYLKIDNL TGELSTSERR IDREKLPQCQ ENSP00000441802/1-1255 VASDLGIVTG SGEVTFSLES GSEYLKIDNL TGELSTSERR IDREKLPQCQ ENSTTRP00000000682/1-1200 VASDLGIVTG SGEVTFSLES GSEYLKIDNL TGELSTSERR IDREKLPQCQ ENSBTAP00000000069/1-1203 VASDLGIVTG SGEVTFSLES GSEYLKIDNL TGELSTSERR IDREKLPQCQ 101 150 BACU007662/1-1071 MIFDENECFL DFEVSVIGPS QSWVDLFEGR VIVLDINDNT PTFPSPVLTL bmy_14246T0/1-1081 MIFDENECFL DFEVSVIGPS QSWVDLFEGR VIVLDINDNT PTFPSPVLTL ENSP00000441802/1-1255 MIFDENECFL DFEVSVIGPS QSWVDLFEGQ VIVLDINDNT PTFPSPVLTL ENSTTRP00000000682/1-1200 MIFDENECFL DFEVSVIGPS QSWVDLFEGR VIVLDINDNT PTFPSPVLTL ENSBTAP00000000069/1-1203 MIFDENECFL DFEVSVIGPS QSWVDLFEGR VIVLDINDNT PTFPSPVLTL 151 200 BACU007662/1-1071 TVEENRPVGT LYLLPTATDR DFGRNGIERY ELLQEP--GG GGGGG----- bmy_14246T0/1-1081 TVEENRPVGT LYLLPTATDR DFGRNGIERY ELLQEP-GGG GGGGGEGRRA ENSP00000441802/1-1255 TVEENRPVGT LYLLPTATDR DFGRNGIERY ELLQEP--GG GGSGGESRRA ENSTTRP00000000682/1-1200 TVEENRPVGT LYLLPTATDR DFGRNGIERY ELLQEP--GG GSSGGEGRRA ENSBTAP00000000069/1-1203 TVEENRPVGT LYLLPTATDR DFGRNGIERY ELLQEPGGGG GGGGGEGRRA 201 250 BACU007662/1-1071 ---------G GGGE----GG TDGPRRDLPP ----GASSTG GRSSVFELQV bmy_14246T0/1-1081 GPADSAPYPG GGGNGASGGG PGGSKRRLDA PEGGGGTSTG GRSSVFELQV ENSP00000441802/1-1255 GAADSAPYPG GGGNGASGGG SGGSKRRLDA SEGGGGTNPG GRSSVFELQV ENSTTRP00000000682/1-1200 GPADSAPYPG GGGNGASGGG PGGSKRRLDA PEGGGGTSTG GRSSVFELQV ENSBTAP00000000069/1-1203 GPADSAPYPG GGGNGGSGGG PGGSKRRLDA PEAGGGTSPG GRSSVFELQV 251 300 BACU007662/1-1071 ADTPDGEKQP QLIVKGALDR EQRDSYELTL RVRDGGDPPR SSQAILRVLI bmy_14246T0/1-1081 ADTPDGEKQP QLIVKGALDR EQRDSYELTL RVRDGGDPPR SSQAILRVLI ENSP00000441802/1-1255 ADTPDGEKQP QLIVKGALDR EQRDSYELTL RVRDGGDPPR SSQAILRVLI ENSTTRP00000000682/1-1200 ADTPDGEKQP QLIVKG---- ---------- ---------- ---------- ENSBTAP00000000069/1-1203 ADTPDGEKQP QLIVKG---- ---------- ---------- ---------- 301 350 BACU007662/1-1071 TDVNDNSPRF EKSVYEADLA ENSAPGTPIL QLRAADLDVG VNGQIEYVFG bmy_14246T0/1-1081 TDVNDNSPRF EKSVYEADLA ENSAPGTPIL QLRAADLDVG VNGQIEYVFG ENSP00000441802/1-1255 TDVNDNSPRF EKSVYEADLA ENSAPGTPIL QLRAADLDVG VNGQIEYVFG ENSTTRP00000000682/1-1200 ---------- ---VYEADLA ENSAPGTPIL QLRAADLDVG VNGQIEYVFG ENSBTAP00000000069/1-1203 ---------- --SVYEADLA ENSAPGTPIL QLRAADLDVG VNGQIEYVFG 351 400 BACU007662/1-1071 AATESVRRLL RLDETSGWLS VLHRIDREEV NQLRFTVMAR DRGQPPKTDK bmy_14246T0/1-1081 AATESVRRLL RLDETSGWLS VLHRIDREEV NQLRFTVMAR DRGQPPKTDK ENSP00000441802/1-1255 AATESVRRLL RLDETSGWLS VLHRIDREEV NQLRFTVMAR DRGQPPKTDK ENSTTRP00000000682/1-1200 AATESVRRLL RLDETSGWLS VLHRIDREEV NQLRFTVMAR DRGQPPKTDK ENSBTAP00000000069/1-1203 AATESVRRLL RLDETSGWLS VLHRIDREEV NQLRFTVMAR DRGQPPKTDK 401 450 BACU007662/1-1071 ATVVLNIKDE NDNVPSIEIR KIGRIPLKDG VANVAEDVLV DTPIALVQVS bmy_14246T0/1-1081 ATVVLNIKDE NDNVPSIEIR KIGRIPLKDG VANVAEDVLV DTPIALVQVS ENSP00000441802/1-1255 ATVVLNIKDE NDNVPSIEIR KIGRIPLKDG VANVAEDVLV DTPIALVQVS ENSTTRP00000000682/1-1200 ATVVLNIKDE NDNVPSIEIR KIGRIPLKDG VANVAEDVLV DTPIALVQVS ENSBTAP00000000069/1-1203 ATVVLNIKDE NDNVPSIEIR KIGRIPLKDG VANVAEDVLV DTPIALVQVS 451 500 BACU007662/1-1071 DRDQGENGVV TCTVVGDVPF QLKPASDTEG DQNKKKYFLH TSAPLDYETT bmy_14246T0/1-1081 DRDQGENGVV TCTVVGDVPF QLKPASDTEG DQNKKKYFLH TSAPLDYETT ENSP00000441802/1-1255 DRDQGENGVV TCTVVGDVPF QLKPASDTEG DQNKKKYFLH TSTPLDYEAT ENSTTRP00000000682/1-1200 DRDQGENGVV TCTVVGDVPF QLKPASDTEG DQNKKKYFLH TSAPLDYEAT ENSBTAP00000000069/1-1203 DRDQGENGVV TCTVVGDVPF QLKPASDTEG DQNKKKYFLH TSAPLDYETT 501 550 BACU007662/1-1071 REFNVVIVAV DSGSPSLSSN NSLIVKVGDT NDNPPVFGQS VVEVYFPENN bmy_14246T0/1-1081 REFNVVIVAV DSGSPSLSSN NSLIVKVGDT NDNPPVFGQS VVEVYFPENN ENSP00000441802/1-1255 REFNVVIVAV DSGSPSLSSN NSLIVKVGDT NDNPPMFGQS VVEVYFPENN ENSTTRP00000000682/1-1200 REFNVVIVAV DSGSPSLSSN NSLIVKVGDT NDNPPVFGQS VVEVYFPENN ENSBTAP00000000069/1-1203 REFNVVIVAV DSGSPSLSSN NSLIVKVGDT NDNPPVFGQS VVEVYFPENN 551 600 BACU007662/1-1071 IPGERVATVL ATDADSGKNA EIAYSLDSSV MGIFAIDPDS GDILVNTVLD bmy_14246T0/1-1081 IPGERVATVL ATDADSGKNA EIAYSLDSSV MGIFAIDPDS GDILVNTVLD ENSP00000441802/1-1255 IPGERVATVL ATDADSGKNA EIAYSLDSSV MGIFAIDPDS GDILVNTVLD ENSTTRP00000000682/1-1200 IPGERVATVL ATDADSGKNA EIAYSLDSSV MGIFAIDPDS GDVLVNTVLD ENSBTAP00000000069/1-1203 IPGERVATVL ATDADSGKNA EIAYSLDSSV MGIFAIDPDS GDILVNTMLD 601 650 BACU007662/1-1071 REQTDRYEFK VNAKDKGIPV LQGSTTVIVQ VADKNDNDPK FMQDVFTFYV bmy_14246T0/1-1081 REQTDRYEFK VNAKDKGIPV LQGSTTVIVQ VADKNDNDPK FMQDVFTFYV ENSP00000441802/1-1255 REQTDRYEFK VNAKDKGIPV LQGSTTVIVQ VADKNDNDPK FMQDVFTFYV ENSTTRP00000000682/1-1200 REQTDRYEFK VNAKDKGIPV LQGSTTVIVQ VADKNDNDPK FMQDVFTFYV ENSBTAP00000000069/1-1203 REQTDRYEFK VNARDKGVPV LQGSTTVIVQ VADKNDNDPK FMQDVFTFYV 651 700 BACU007662/1-1071 KENLQPNSPV GMVTVMDADK GRNAEMSLYI EENSNIFSIE NDTGTIYSTM bmy_14246T0/1-1081 KENLQPNSPV GMVTVMDADK GRNAEMSLYI EENSNIFSIE NDTGTIYSTM ENSP00000441802/1-1255 KENLQPNSPV GMVTVMDADK GRNAEMSLYI EENNNIFSIE NDTGTIYSTM ENSTTRP00000000682/1-1200 KENLQPNSPV GMVTVMDADK GRNAEMSLYI EENSNIFSIE NDTGTIYSTM ENSBTAP00000000069/1-1203 KENLQPNSPV GMVTVMDADK GRNAEMSLYI EENSNIFSIE NDTGTIYSTM 701 750 BACU007662/1-1071 SFDREHQTTY TFRVKAVDGG DPPRSATATV SLFVMDENDN APTVTLPRNV bmy_14246T0/1-1081 SFDREHQTTY TFRVKAVDGG DPPRSATATV SLFVMDENDN APTVTLPRNV ENSP00000441802/1-1255 SFDREHQTTY TFRVKAVDGG DPPRSATATV SLFVMDENDN APTVTLPKNI ENSTTRP00000000682/1-1200 SFDREHQTTY TFRVKAVDGG DPPRSATATV SLFVMDENDN APTVTLPRNV ENSBTAP00000000069/1-1203 SFDREHQTTY TFRVKAVDGG DPPRSATATV SLFVMDENDN APTVTLPRNI 751 800 BACU007662/1-1071 SYTLLPPSSN VRTVVATVLA RDSDDGINAD LNYSIVGGNP FKLFEIDSTS bmy_14246T0/1-1081 SYTLLPPSSN VRTVVATVLA RDSDDGINAD LNYSIVGGNP FKLFEIDSTS ENSP00000441802/1-1255 SYTLLPPSSN VRTVVATVLA TDSDDGINAD LNYSIVGGNP FKLFEIDPTS ENSTTRP00000000682/1-1200 SYTLLPPSSN VRTVVATVLA TDSDDGINAD LNYSIVGGNP FKLFEIDSTS ENSBTAP00000000069/1-1203 SYTLLPPSSN VRTVVATVLA TDSDDGINAD LNYSIVGGNP FKLFEIDSTS 801 850 BACU007662/1-1071 GVVSLVGKLT QKHYGLHRLV VQVNDSGQPS QSTTTLVHVF VNESVSNATV bmy_14246T0/1-1081 GVVSLVGKLT QKHYGLHRLV VQVNDSGQPS QSTTTLVHVF VNESVSNATV ENSP00000441802/1-1255 GVVSLVGKLT QKHYGLHRLV VQVNDSGQPS QSTTTLVHVF VNESVSNATA ENSTTRP00000000682/1-1200 GVVSLVGKLT QKHYGLHRLV VQVNDSGQPS QSTTTLVHVF VNESVSNATV ENSBTAP00000000069/1-1203 GVVSLVGKLT QKHYGLHRLV VQVNDSGQPS QSTTTLVHVF VNESVSNATV 851 900 BACU007662/1-1071 IDSQIARSLH TPLTQDIAGD PSYEISKQRL SIVIGVVAGI MTVILIILIV bmy_14246T0/1-1081 IDSQIARSLH TPLTQDIAGD PSYEISKQRL SIVIGVVAGI MTVILIILIV ENSP00000441802/1-1255 IDSQIARSLH IPLTQDIAGD PSYEISKQRL SIVIGVVAGI MTVILIILIV ENSTTRP00000000682/1-1200 IDSQIARSLH TPLTQDIAGD PSYEISKQRL SIVIGVVAGI MTVILIILIV ENSBTAP00000000069/1-1203 IDSQIARSLH TPLTQDIAGD PSYEISKQRL SIVIGVVAGI MTVILIILIV 901 950 BACU007662/1-1071 VMARYCRSKN KNGYEAGKKD HEDFFTPQQH DKSKKPKKDK RNKKSKQPLY bmy_14246T0/1-1081 VMARYCRSKN KNGYEAGKKD HEDFFTPQQH DKSKKPKKDK RNKKSKQPLY ENSP00000441802/1-1255 VMARYCRSKN KNGYEAGKKD HEDFFTPQQH DKSKKPKKDK KNKKSKQPLY ENSTTRP00000000682/1-1200 VMARYCRSKN KNGYEAGKKD HEDFFTPQQH DKSKKPKKDK RNKKSKQPLY ENSBTAP00000000069/1-1203 VMARYCRSKN KNGYEAGKKD HEDFFTPQQH DKSKKPKKDK KNKKSKQPLY 951 1000 BACU007662/1-1071 SSIVTVEASK PNGQRYDSVN EKLSDSPSMG RYRSVNGGPG SPDLARHYKS bmy_14246T0/1-1081 SSIVTVEASK PNGQRYDSVN EKLSDSPSMG RYRSVNGGPG SPDLARHYKS ENSP00000441802/1-1255 SSIVTVEASK PNGQRYDSVN EKLSDSPSMG RYRSVNGGPG SPDLARHYKS ENSTTRP00000000682/1-1200 SSIVTVEASK PNGQRYDSVN EKLSDSPSMG RYRSVNGGPG SPDLARHYKS ENSBTAP00000000069/1-1203 SSIVTVEASK PNGQRYDSVN EKLSDSPSMG RYRSVNGGPG SPDLARHYKS 1001 1050 BACU007662/1-1071 SSPLPTVQLH PQSPTAGKKH QAVQDLPPAN TFVGAGDNIS IGSDHCSEYS bmy_14246T0/1-1081 SSPLPTVQLH PQSPTAGKKH QAVQDLPPAN TFVGAGDNIS IGSDHCSEYS ENSP00000441802/1-1255 SSPLPTVQLH PQSPTAGKKH QAVQDLPPAN TFVGAGDNIS IGSDHCSEYS ENSTTRP00000000682/1-1200 SSPLPTVQLH PQSPTAGKKH QAVQDLPPAN TFVGAGDNIS IGSDHCSEYS ENSBTAP00000000069/1-1203 SSPLPTVQLH PQSPTAGKKH QAVQDLPPAN TFVGAGDNIS IGSDHCSEYS 1051 1100 BACU007662/1-1071 CQTNNKYSKQ --VRCIPNIF KYLRQSIFCK V--------- ---------- bmy_14246T0/1-1081 CQTNNKYSKQ ---------I GSKRQPFRCV L--------- ---------- ENSP00000441802/1-1255 CQTNNKYSKQ PFRRVTFSVV SQPQDPHQGS LQSCYDSGLE ESETPSSKSS ENSTTRP00000000682/1-1200 CQTNNKYSKQ PFRRVTFSVV SQPQDPHQGS LQSCYDSGLE ESETPSSKSS ENSBTAP00000000069/1-1203 CQTNNKYSKQ PFRRVTFSVV SQPQDPHQGS LQSCYDSGLE ESETPSSKSS 1101 1150 BACU007662/1-1071 ---------- ---------- ---------- ---------- ---------- bmy_14246T0/1-1081 ---------- ---------- ---------- ---------- ---------- ENSP00000441802/1-1255 SGPRLGALPL PEDNYERTTP DGSVGEAEHM ENDSRPLPDV ALTGKCTREC ENSTTRP00000000682/1-1200 SGPRLGALPL PEDNYERTTP DGSV------ --DSRPLPDV ALTGKCTREC ENSBTAP00000000069/1-1203 SGPRLGALPL PEDNYERTTP DGSV------ --DSRPLPDV ALTGKCTREC 1151 1200 BACU007662/1-1071 ---------- ---------- -----LSSLL ---------- ---------- bmy_14246T0/1-1081 ---------- ---------- ---------- -----GTDEK LV-------- ENSP00000441802/1-1255 DEYGHSDSCW MPVRTSPERK KSQPKLSTFM PVDERGSQEK LANGEAAIMG ENSTTRP00000000682/1-1200 DEYGHSDSCW MPVRTSPERK KSQPKLSTFM PVDERGSQEK LANGEAAIMG ENSBTAP00000000069/1-1203 DEYGHSDSCW MPVRTSPERK KSQPKLSTFM PVDERGSQEK LANGEAAIMG 1201 1250 BACU007662/1-1071 ----KLLVKI LIAGI----- ---------- ---------- ---------- bmy_14246T0/1-1081 ----QLL--- ---------- ---------- ---------- ---------- ENSP00000441802/1-1255 DRNRNLLNKK LTSSYETFSA ASFSKNEEAN PEDIPLTKTG EYKPSPVNTL ENSTTRP00000000682/1-1200 DRNRNLLNKR LTSSYETFSA ASFSKNEEAN TEDIPLTKTG EYKPSPVNTL ENSBTAP00000000069/1-1203 DRNRNLLNKK LTSSYETFSA ASFSKNEDAN TEDIPLTKTG EYKPSPVNTL 1251 1300 BACU007662/1-1071 ------- bmy_14246T0/1-1081 ------- ENSP00000441802/1-1255 TRREVYL ENSTTRP00000000682/1-1200 TRREVYL ENSBTAP00000000069/1-1203 TRREVYL