Part of scaffold_949 (Scaffold)

For more information consult the page for scaffold_949 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PKD2L1 ENSTTRG00000011895 (Bottlenosed dolphin)

Gene Details

polycystic kidney disease 2-like 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011285, Bottlenosed dolphin)

Protein Percentage 84.86%
cDNA percentage 88.58%
Ka/Ks Ratio 0.50453 (Ka = 0.0619, Ks = 0.1227)

PKD2L1 ENSBTAG00000010742 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014222, Cow)

Protein Percentage 88.54%
cDNA percentage 92.62%
Ka/Ks Ratio 0.4227 (Ka = 0.0614, Ks = 0.1452)

PKD2L1  (Minke Whale)

Gene Details

polycystic kidney disease 2-like 1

External Links

Gene match (Identifier: BACU012401, Minke Whale)

Protein Percentage 74.46%
cDNA percentage 80.76%
Ka/Ks Ratio 0.59894 (Ka = 0.2056, Ks = 0.3433)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1992 bp    Location:110102..118875   Strand:+
>bmy_14125
ATGACAAGCTCCAGCGCCTATTACTACACCAAAGTGATGTCTGAGCTCTTCTTACATACCCCATCAGACACTGGAGTCCCCTTCCAGGCCATCAGCAGCATGGCGGACTTCTGGGATTTTGCCCAGGGCCCACTACTGGACAGTTTGTATTGGACCAAATGGTACAACAACCAGAGCCTGGGCCGCGGCTCCCACTCCTTCATCTACTATGAGAACCTGCTGCTGGGGGCTCCAAGGCTGCAGCAGCTGAGGGACTTCCGCGAGGACATTCTGAGCTGCTACGACGTCTACTCCCCAGACAAGGAAGAGCAACTCCCCTTTGGGCTCCTCAATGGCACAGCATGGACCTACCACTCGCAGGATGAGCTGGGGGGCTCCTCTCACTGGGGCCGGCTCACAAGCTACAGCGGAGGTGGCTACTACCTGGACCTTCCAGGATCTCGACAGGCCAGTGCAGAGGCACTCAGGGACCTTCAGGAGGGCCTGTGGCTGGACAGGGGCAGTCGGGTGGTCTTCATTGACTTCTCAGTCTACAATGCCAACATTAATCCTTTCTGTGTTCTGAGACGGGTGGTGGAGTTTCCAGCTACAGGAGGTGCCATCCCATCCTGGCAAATCCGCACAGTTAAGCTGATCCGCTATGTCAGCAACTGGGACTTCTTTATCATTGGCTGTGAGATCATCTTCTGCATCTTCATCTTCTACTACGTAATGGAGAAGATCCTGGAGCTCCACATCCACCGGCTTCGTTACCTCAGCAGCATCTGGAACATTCTGGACCTGGTGGTCATCTTGCTCTCCATTGTGGATGTAGGCTTCCACATATTCCAAACCCTCGAGGTGAATCGGCTGATGGGGAAGCTTCTGCAGCAGCCAAACACGTATGCTGACTTTGAGTTCCTCGCCTTCTGGCAGACACAGTACAACAACATGAACACCGTCAACCTCTTCTTTGCCTGGATCAAGATATTCAAGTACATCAGCTTCAATAAGACCATGACCCAGCTCTCCTCCAGGCTGGCCCGCTGTGCCAAGGACATCCTGGGCTTCGCCGTCATGTTCTTCATCGAGTTTTTCGCCTACGCCCAGCTGGGCTACCTGCTTTTTGGGACCCAATTCCAGATCATCCTTGGGGATTTTGACTACAATGCTATCAACAATGCCAACCGCATCCTGGGACCAGCCTACTTTGTCACCTATGTCTTCTTCGTCTTCTTTGTGCTCCTGAATATGTTTCTGGCCATCATCAATGACACATACTCAGAGGTCAAGGAGGAGTTGGCTGGACAGATGGATGAGCTACAGCTTTCGGACCTCCTGAAACAGGGCTACAACAAGACCCTACTGAGGCTGCATCTGAGGAAGGAGCAGGTTTCGGACGTGCAGAAGGTCCTGCAGGGTGGGGAGCAGGAGATCCAGTTCGAGGATTTCACCAACACCTTGAAGGAGCTGGGGCACACAGAGCATGAGATCACTGAGCTCACGGCTGCCTTCACCAGGTTTGGCCAAGATGGGACTCACATCCTGGATGAGAAGGAGCGGGAACAAATGCGACAGGACCTGGAGGAGGAAAGGGTGGCCCTCAACGCTGAGACTGAGAACCTGCGCCGGTCCACTGTGAGTAGCCCACCAGGCGAGTCGAGTCCAGAGGCTGCCGAAGCAGGTGGCTGGGTTTCAGAAGAAGAATTCTACATGCTCACAAGGAGAGTTTTGCAGCTGGAGACTGTCCTGGAAGGAGTCATGACCCAGGTTGATGCCGTGGGCTCAAAGCTGACGATGCTGGAGAAGAAAGGGCAGCTGGCTCCCTCTCCAGGCATGGGGGAACAAGGCATTTGGGAGCACCTGCAGGCAGCCCCAGCTGTGACTCCAGCCCCCTGGGGACTCCAGGGCGGGCAGGAGAGTGGTGGGGGAGGGGTCCTAAAGCATCAGACAGCAGGCTCCTCTGTCACCACCTCCCCAGAAGCCCCCTCAGCACACACCCTCCACTTCTAG

Related Sequences

bmy_14125T0 Protein

Length: 664 aa      View alignments
>bmy_14125T0
MTSSSAYYYTKVMSELFLHTPSDTGVPFQAISSMADFWDFAQGPLLDSLYWTKWYNNQSLGRGSHSFIYYENLLLGAPRLQQLRDFREDILSCYDVYSPDKEEQLPFGLLNGTAWTYHSQDELGGSSHWGRLTSYSGGGYYLDLPGSRQASAEALRDLQEGLWLDRGSRVVFIDFSVYNANINPFCVLRRVVEFPATGGAIPSWQIRTVKLIRYVSNWDFFIIGCEIIFCIFIFYYVMEKILELHIHRLRYLSSIWNILDLVVILLSIVDVGFHIFQTLEVNRLMGKLLQQPNTYADFEFLAFWQTQYNNMNTVNLFFAWIKIFKYISFNKTMTQLSSRLARCAKDILGFAVMFFIEFFAYAQLGYLLFGTQFQIILGDFDYNAINNANRILGPAYFVTYVFFVFFVLLNMFLAIINDTYSEVKEELAGQMDELQLSDLLKQGYNKTLLRLHLRKEQVSDVQKVLQGGEQEIQFEDFTNTLKELGHTEHEITELTAAFTRFGQDGTHILDEKEREQMRQDLEEERVALNAETENLRRSTVSSPPGESSPEAAEAGGWVSEEEFYMLTRRVLQLETVLEGVMTQVDAVGSKLTMLEKKGQLAPSPGMGEQGIWEHLQAAPAVTPAPWGLQGGQESGGGGVLKHQTAGSSVTTSPEAPSAHTLHF*