Part of scaffold_935 (Scaffold)

For more information consult the page for scaffold_935 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBM28 ENSTTRG00000013647 (Bottlenosed dolphin)

Gene Details

RNA binding motif protein 28

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012957, Bottlenosed dolphin)

Protein Percentage 92.56%
cDNA percentage 94.2%
Ka/Ks Ratio 0.59219 (Ka = 0.0188, Ks = 0.0317)

RBM28 ENSBTAG00000017001 (Cow)

Gene Details

RNA-binding protein 28

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022610, Cow)

Protein Percentage 90.25%
cDNA percentage 92.75%
Ka/Ks Ratio 0.34921 (Ka = 0.0503, Ks = 0.1439)

RBM28  (Minke Whale)

Gene Details

RNA binding motif protein 28

External Links

Gene match (Identifier: BACU006820, Minke Whale)

Protein Percentage 97.49%
cDNA percentage 98.63%
Ka/Ks Ratio 0.89526 (Ka = 0.012, Ks = 0.0134)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2352 bp    Location:479723..448741   Strand:-
>bmy_14111
ATGGCCGGGCTGACCCTGTTTGTGGGCCGCCTCCCGCCCTCGGCCCGCAGCGAGCAGCTGGAGGAGCTGTTCAGTCAGGTGGGGCCGGTGAAGCAGTGCTTCGTGGTGACTGAGAAAGGGAGTAAGGCATGTCGAGGCTTCGGCTATGTCACTTTTTCTATGCTGGAAGATGTTCAGAGGGCCCTCAAGGAGATTACCACCTTCGAAGGCTGCAAGATCACCGTGACTGTTGCCAAGAAAAAACTGAGAAATAAGTCCAAGGAAAAGGGGAAAACTGAAAATTCAGAGTCCCCAAAGAAGGAGCTGCAGCCTAAAAAAGCCAAAGTGGCAGATAAGAAAGCCAGATTAATTATTCGGAACCTGAGCTTTAAGTGTTCAGAAGATGACTTGAAGACAGTATTTGCTCAGTTTGGAGCTGTCCTGGAAGTAAACATCCCTAGGAAACCRGGTACTGGCAAACCTTTATTTTATGGAAAGATGCGTGGTTTTGCTTTTGTTCAGTTCAAAAACCTCCTAGAAGCAGGAAAGGCTCTCAAAAGCATGAACATGAAAGAGATAAAAGGGCGGACAGTGGCTGTGGATTGGGCTGTGGCAAAGGATAAATATAAAAATACACAGTCTGCCTCTGTCGCAGGTGAGGAGAAGAGGCCTGAACCTAAATGTCAGGAATTAGGTCAAGAGAATGGCAGGGAAGAAGAGGATGTGGAGGAGGAGGAGAATGATGGTGATTATGATGATGAGGAAGATGATGAAGAAGAAGATGAGGAGGAGGAGGAGAATAAAGAATCAAAGCTGACCAAGTCTGTGCAAATTCAGAAGAGAGCAGTCAAGAGGGCCGCACCTGCAGAAAGCAGTGAAGAGGAGCATTCTGATGACAACAGCGACCTGGAGGAAAGAGACAGTACTGATGGTGGAGAGGACCTGGCTCAGAGTGATACCAACACTGAAGAGCAAGAGGAGGAAGTCTCGAAAAAGAAGAAGAAGAGGAAATTACCCTCTGATGTGAATGAAGGGAAAACTGTCTTTATCAGAAACCTGTCCTTCAACTCAGAGGAAGAAGACCTTGGAGAGCTCMTCCAGCAGTTTGGAGATCTTAAATATGTCCGCATTGTCTTGCATCCAGACACAGAGCATTCTAAAGGTTGTGCATTTGCCCAGTTCATGACTCAAGAAGCGGCTCAGAAATGCCTCGAAGCTGCCTCTCCAGATACCGAGAGTGGTGGGCTTAAACTGGATGGCCGGCAGCTTAAGGTTGACTTGGCAGTGACCCGTGATGAGGCTGCAAAGCTCCGGACAAAGAAGGTGAAGAAGCCGACTGGGACCCGGAACCTCTATCTGGCCCGAGAAGGCTTGATTCGTGCTGGGACGAAGGCTGCAGAGGGTGTGAGTGCTGCTGATATGGCCAAAAGAGAACGATTTGAGCTGCTGAAGCATCAGAAACTCAAGGACCAGAATATCTTTGTCTCCCAGACCAGGCTGTGCCTGCACAATCTCCCAAAGGCCGTGGATGACAAACGGCTCAGAAAGCTGCTGCTGAATGCCACTGGAGGGGAGAAGGGGGTGCGCATCAAGGAGGTGTATTCTAATAAAACAGACATTCATAAGTGCTATCCCAATAAAACTCTTGTGATGTGTCGGGTAATGCGAGGCCTTAAAGGAGCTCATGGGAAAATTAACGGTCAGTCCTTGGGCTATGCCTTTGCAGARTTCCAGGAGCACGAGCATGCCCTGGCAGCCCTACGCCACATCAACAACAATCCAGAAATCTTTGGGCCTCAGAAGAGACCAATAGTGGAGTTCTCTTTGGAAGATCGAAGGAAACTTAAAATAAAGGAACTGAGGATCCAGCGCAGCCTGCAAAAAGTGAAATCCAAGTCGGCAACTGCTGAGCAGCCCCAGCAAGAACAACCAGAGCTTAGAAAAAAACAGCAACAGAAAACAGCTCAGAACCACATGCATCAAGAAAGCAAGGCCCCCGTGGAGCAAGAGGAGAAGGCAGGGTCTGTCCCGTGGACGGGCTTCCAGACCAAGGCCGAAGTGGAGCGCGTGGAGCTGTCTGATGGGAAGAAGAGAAGAAAGGTCCTGGTGCTCCCCTCACACCGAGGCCCCAAAATCAGGTTACGGGACAAAGGCAAAATGAAGCCTCTCCCTCCCAAGAAGCCAAACCCCCAGATAAACCACTGGAAGCAAGAGAAGCAGAAATTATCTTCCAAGCAGGTACCTAGGAAGAAAGCTAAGGGAAACAAGACAGAAATTCGCTTCAACCAGCTGGTCGAACAATATAAGCAGAAGTTATTGGGACCTTCTAAAGGAGCTCCTCTTGCAAAGAGGAGCAAATGGTTTGACAGTTGA

Related Sequences

bmy_14111T0 Protein

Length: 784 aa      View alignments
>bmy_14111T0
MAGLTLFVGRLPPSARSEQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALKEITTFEGCKITVTVAKKKLRNKSKEKGKTENSESPKKELQPKKAKVADKKARLIIRNLSFKCSEDDLKTVFAQFGAVLEVNIPRKPGTGKPLFYGKMRGFAFVQFKNLLEAGKALKSMNMKEIKGRTVAVDWAVAKDKYKNTQSASVAGEEKRPEPKCQELGQENGREEEDVEEEENDGDYDDEEDDEEEDEEEEENKESKLTKSVQIQKRAVKRAAPAESSEEEHSDDNSDLEERDSTDGGEDLAQSDTNTEEQEEEVSKKKKKRKLPSDVNEGKTVFIRNLSFNSEEEDLGELJQQFGDLKYVRIVLHPDTEHSKGCAFAQFMTQEAAQKCLEAASPDTESGGLKLDGRQLKVDLAVTRDEAAKLRTKKVKKPTGTRNLYLAREGLIRAGTKAAEGVSAADMAKRERFELLKHQKLKDQNIFVSQTRLCLHNLPKAVDDKRLRKLLLNATGGEKGVRIKEVYSNKTDIHKCYPNKTLVMCRVMRGLKGAHGKINGQSLGYAFAEFQEHEHALAALRHINNNPEIFGPQKRPIVEFSLEDRRKLKIKELRIQRSLQKVKSKSATAEQPQQEQPELRKKQQQKTAQNHMHQESKAPVEQEEKAGSVPWTGFQTKAEVERVELSDGKKRRKVLVLPSHRGPKIRLRDKGKMKPLPPKKPNPQINHWKQEKQKLSSKQVPRKKAKGNKTEIRFNQLVEQYKQKLLGPSKGAPLAKRSKWFDS*