KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:17:49 2014 Check: 00 .. Name: ENSP00000223073/1-759 Len: 794 Check: 6174 Weight: 1.00 Name: ENSBTAP00000022610/1-756 Len: 794 Check: 226 Weight: 1.00 Name: ENSTTRP00000012957/1-757 Len: 794 Check: 9506 Weight: 1.00 Name: bmy_14111T0/1-783 Len: 794 Check: 7720 Weight: 1.00 Name: BACU006820/1-759 Len: 794 Check: 4872 Weight: 1.00 // 1 50 ENSP00000223073/1-759 MAGLTLFVGR LPPSARSEQL EELFSQVGPV KQCFVVTEKG SKACRGFGYV ENSBTAP00000022610/1-756 MAGLTLFVGR LPPSARSEQL EELFSQVGPV KQCFVVTEKG SKACRGFGYV ENSTTRP00000012957/1-757 MAGLTLFVGR LPPSARSEQL EELFSQVGPV KQCFVVTEKG SKACRGFGYV bmy_14111T0/1-783 MAGLTLFVGR LPPSARSEQL EELFSQVGPV KQCFVVTEKG SKACRGFGYV BACU006820/1-759 MAGLTLFVGR LPPSARSEQL EELFSQVGPV KQCFVVTEKG SKACRGFGYV 51 100 ENSP00000223073/1-759 TFSMLEDVQR ALKEITTFEG CKINVTVAKK KLRNKTKEKG KNENSECPKK ENSBTAP00000022610/1-756 TFSMVEDVQR ALKEITTFEG CKINVTIAKK KLRNKSKEKG KTENSESPEK ENSTTRP00000012957/1-757 TFSMLEDVQR ALK-ITTFEG CKITVTVAKK KLRNKSKEKG KTENSKSPKK bmy_14111T0/1-783 TFSMLEDVQR ALKEITTFEG CKITVTVAKK KLRNKSKEKG KTENSESPKK BACU006820/1-759 TFSMLEDVQR ALKEITTFEG CKITVTVAKK KLRNKSKEKG KTENSESPKK 101 150 ENSP00000223073/1-759 EPKAKKAKVA DKKARLIIRN LSFKCSEDDL KTVFAQFGAV LEVNIPRKPD ENSBTAP00000022610/1-756 ELKPKKAKVA DKKARLIIRN LSFKCSEDDL KTVFSQFGTI LEVNIPRKPD ENSTTRP00000012957/1-757 ELQPKKAKVA DKKARLIIRN LSFKCSEDDL KTVFAQFGAV LEVNIPRKPD bmy_14111T0/1-783 ELQPKKAKVA DKKARLIIRN LSFKCSEDDL KTVFAQFGAV LEVNIPRKPG BACU006820/1-759 ELQPKKAKVA DKKARLIIRN LSFKCSEDDL KTVFAQFGAV LEVNIPRKPD 151 200 ENSP00000223073/1-759 -------GKM RGFGFVQFKN LLEAGKALKG MNMKEIKGRT VAVDWAVAKD ENSBTAP00000022610/1-756 -------GKM RGFAFVQFKN LLEAGKALKG MNMKEIKGRT VAVDWAVAKD ENSTTRP00000012957/1-757 -------GKM RGFAFVQFKN LLEAGKALKS MNMKEIKGRT VAVDWAVAKD bmy_14111T0/1-783 TGKPLFYGKM RGFAFVQFKN LLEAGKALKS MNMKEIKGRT VAVDWAVAKD BACU006820/1-759 -------GKM RGFAFVQFKN LLEAGKALKS MNMKEIKGRT VAVDWAVAKD 201 250 ENSP00000223073/1-759 KYKDTQSVSA I---GEEKSH ESKHQESVKK KGREEEDMEE EENDDDDDDD ENSBTAP00000022610/1-756 KYKSTQSASI PDYEGEEKRP EPEHQELDQE NGREEEDMEE GENESDYDDD ENSTTRP00000012957/1-757 KYKNTQSASV A---GEKKRP EPKCQELGQE NGREEEDMEE EENDGGYDDE bmy_14111T0/1-783 KYKNTQSASV A---GEEKRP EPKCQELGQE NGREEEDVEE EENDGDYDDE BACU006820/1-759 KYKNTQSASV A---GEEKRP EPKCQELGQQ NGREEEDVEE EENDGAYDDE 251 300 ENSP00000223073/1-759 DEEDGVFDDE DEEEENIESK VTKPVQIQKR AVKRPAPAKS SD--HSEEDS ENSBTAP00000022610/1-756 ---------- EEEEEDKESK LPKSVQIHKR AVKRPAPAES SDEEHSDDDS ENSTTRP00000012957/1-757 EDD----EEE EEDEENRESK LTKPVXXXXX XXXXXXXXXX XX--XXXXXX bmy_14111T0/1-783 EDDE---EED EEEEENKESK LTKSVQIQKR AVKRAAPAES SEEEHSDDNS BACU006820/1-759 EDDE---EED EEEEENKESK LTKPVHIQKR AVKRAAPAES SEEEHSDDNS 301 350 ENSP00000223073/1-759 DLEESDSIDD GEELAQSDTS TEEQEDKAVQ VS---NKKKR KLPSDVNEGK ENSBTAP00000022610/1-756 DLEERDSIDG GEDLAQSDTS SEEQEEEDIE VS-KKKRKKR KLPSDVNEGK ENSTTRP00000012957/1-757 XXXXRDRIDG GEGLGQSDTN TEEQEEEDIQ VS-KKKKKKR KLPSDVNEGK bmy_14111T0/1-783 DLEERDSTDG GEDLAQSDTN TEEQEEE--- VS--KKKKKR KLPSDVNEGK BACU006820/1-759 DLEESDSIDG GEDLAQSDTN TEEQEEE--- VSKKKKKKKR KLPSDVNEGK 351 400 ENSP00000223073/1-759 TVFIRNLSFD SEEEELGELL QQFGELKYVR IVLHPDTEHS KGCAFAQFMT ENSBTAP00000022610/1-756 TVFIRNLSFD SEEEDLGELL QQFGDLKYVR IVLHPDTEHS KGCAFAQFMT ENSTTRP00000012957/1-757 TVFIRNLSFD SEEEDLGELL QQFGDLKYVR IVLHPDTEHS KGCAFAQFMT bmy_14111T0/1-783 TVFIRNLSFN SEEEDLGELX QQFGDLKYVR IVLHPDTEHS KGCAFAQFMT BACU006820/1-759 TVFIRNLSFD SEEEDLGELL QQFGDLKYVR IVLHPDTEHS KGCAFAQFMT 401 450 ENSP00000223073/1-759 QEAAQKCLLA ASPENEAGGL KLDGRQLKVD LAVTRDEAAK LQTTKVKKPT ENSBTAP00000022610/1-756 QEAAQKCLEA ASPEAEGGGL KLDGRQLKVD LAVTRDEAAK LRTKKVKKPT ENSTTRP00000012957/1-757 QEAAQKCLEA ASPETESGGL KLDGRQLKVD LAVTRDEAAK LRTKKVKKPT bmy_14111T0/1-783 QEAAQKCLEA ASPDTESGGL KLDGRQLKVD LAVTRDEAAK LRTKKVKKPT BACU006820/1-759 QEAAQKCLEA ASPDTESGGL KLDGRQLKVD LAVTRDEAAK LRTKKVKKPT 451 500 ENSP00000223073/1-759 GTRNLYLARE GLIRAGTKAA EGVSAADMAK RERFELLKHQ KLKDQNIFVS ENSBTAP00000022610/1-756 GTRNLYLARE GLIRAGTKAA EGVSAADMAK RERFELLKHQ KLKDQNIFVS ENSTTRP00000012957/1-757 GTRNLYLARE GLIRAGTKAA EGVSAADMAK RERFELLKHQ KLKDQNIFVS bmy_14111T0/1-783 GTRNLYLARE GLIRAGTKAA EGVSAADMAK RERFELLKHQ KLKDQNIFVS BACU006820/1-759 GTRNLYLARE GLIRAGTKAA EGVSAADMAK RERFELLKHQ KLKDQNIFVS 501 550 ENSP00000223073/1-759 RTRLCLHNLP KAVDDKQLRK LLLSATSGEK GVRIKE---- ---------- ENSBTAP00000022610/1-756 RTRLCLHNLP KAVDDKQLRK LLLNSTRGEK AVRIKE---- ---------- ENSTTRP00000012957/1-757 RTRLCLHNLP KAVDDKQLRK LLLNATRGEK GVRIKE---- ---------- bmy_14111T0/1-783 QTRLCLHNLP KAVDDKRLRK LLLNATGGEK GVRIKEVYSN KTDIHKCYPN BACU006820/1-759 RTRLCLHNLP KAVDDKRLRK LLLNATGGEK GVRIKE---- ---------- 551 600 ENSP00000223073/1-759 -----CRVMR DLKGVHGNMK GQSLGYAFAE FQEHEHALKA LRLINNNPEI ENSBTAP00000022610/1-756 -----CRVMR DLKGAYGKIK GQSLGYAFAE FQEHEHALAA LRHINNNPEI ENSTTRP00000012957/1-757 -----CRVMR GLKGAHGKIN GQSLGYAFAE FQEHEHALAA LRHINNNPEI bmy_14111T0/1-783 KTLVMCRVMR GLKGAHGKIN GQSLGYAFAE FQEHEHALAA LRHINNNPEI BACU006820/1-759 -----CRVMR GLKGAHGKIN GQSLGYAFAE FQEHEHALAA LRHINNNPEI 601 650 ENSP00000223073/1-759 FGPLKRPIVE FSLEDRRKLK MKELRIQRSL QKMRSKPATG E-PQKGQPEP ENSBTAP00000022610/1-756 FGPQKRPIVE FSLEDRRKLK VKELRIQRSQ QKVKSKPGTG E-PQQVPPEP ENSTTRP00000012957/1-757 FGPQKRPIVE FSLEDRRKLK IKELRIQRSL QKVKSMSATG EQPQQEPPEL bmy_14111T0/1-783 FGPQKRPIVE FSLEDRRKLK IKELRIQRSL QKVKSKSATA EQPQQEQPEL BACU006820/1-759 FGPQKRPIVE FSLEDRRKLK IKELRIQRSL QKVKPRSATG EQPQQEQPEL 651 700 ENSP00000223073/1-759 AKDQQQKAAQ HHTEEQSKVP PEQKRKAGST SWTGFQTKAE VEQVELPDGK ENSBTAP00000022610/1-756 GKKQQQKAAQ NHMQEQSQAS VRQKGTADSV SWAGFQTKAE VEHVELPDGK ENSTTRP00000012957/1-757 GKKQQQKTAQ SHMPQQSKAP VEQKEKAGSV SWTGFQTKAE VEHVELSDGK bmy_14111T0/1-783 RKKQQQKTAQ NHMHQESKAP VEQEEKAGSV PWTGFQTKAE VERVELSDGK BACU006820/1-759 GKKQQQKTAQ NHMHQQSKAP TEQEEKAGSV SWTGFQTKAE VEHVELSDGK 701 750 ENSP00000223073/1-759 KRRKVLALPS HRGPKIRLRD KGKVKPVHPK KPKPQINQWK QEKQQLSSEQ ENSBTAP00000022610/1-756 KRRKVLALPS HRGPKIRLRD KGKMKPLPPK KPKPQTNHQK QEKQKLSSKQ ENSTTRP00000012957/1-757 KRRKVLVLPS HRGPKIRLRD KGKMKPLPPK KPTPQINHWK QEKQKLSSKQ bmy_14111T0/1-783 KRRKVLVLPS HRGPKIRLRD KGKMKPLPPK KPNPQINHWK QEKQKLSSKQ BACU006820/1-759 KRRKVLVLPS HRGPKIRLRD KGKMKPLPPK KANPQINHWK QEKQKLSSKQ 751 800 ENSP00000223073/1-759 VSRKKAKGNK TETRFNQLVE QYKQKLLGPS KGAPLAKRSK WFDS ENSBTAP00000022610/1-756 VPRKKAKGNK TEVRFNQLVE QYKQKLLGLS KGVPLAKRSK WFDS ENSTTRP00000012957/1-757 VPRKKAKGNK TEIRFNQLVE QYKQKLLGPS KGAPLAKRSK WFDS bmy_14111T0/1-783 VPRKKAKGNK TEIRFNQLVE QYKQKLLGPS KGAPLAKRSK WFDS BACU006820/1-759 VPRKKAKGNK TEIRFNQLVE QYKQKLLGPS KGAPLAKRSK WFDS