Part of scaffold_951 (Scaffold)

For more information consult the page for scaffold_951 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPSF4 ENSTTRG00000003007 (Bottlenosed dolphin)

Gene Details

cleavage and polyadenylation specific factor 4, 30kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002821, Bottlenosed dolphin)

Protein Percentage 72.86%
cDNA percentage 72.86%
Ka/Ks Ratio 0.20644 (Ka = 0.0523, Ks = 0.2534)

CPSF4 ENSBTAG00000002090 (Cow)

Gene Details

Cleavage and polyadenylation specificity factor subunit 4

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002701, Cow)

Protein Percentage 83.95%
cDNA percentage 82.85%
Ka/Ks Ratio 0.16335 (Ka = 0.1249, Ks = 0.7649)

CPSF4  (Minke Whale)

Gene Details

cleavage and polyadenylation specific factor 4, 30kDa

External Links

Gene match (Identifier: BACU012109, Minke Whale)

Protein Percentage 18.53%
cDNA percentage 34.49%
Ka/Ks Ratio 0.25409 (Ka = 1.378, Ks = 5.4234)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1110 bp    Location:581026..558014   Strand:-
>bmy_13993
GGACCGTGTGCGGCGGGGCCGACAGCGGGTAGAGGTGTGAGGGCGGCAGGGGACCTGAGCGGGAGCCGGGCCGGGGTGGCCGCCGCCGCCACCGCCACCATGCAGGAAATCATCGCCAGCGTGGACCACATCAAGTTCGACTTGGAGATCGCGGTGGAGCAGCAGCTTGGGGCGCAGCCGCTGCCCTTCCCCGGCATGGACAAGTCGGGGGCTGCTGTCTGCGAATTCTTTTTGAAAGCTGCCTGTGGCAAAGGGGGCATGTGCCCGTTCCGCCACATCAGCGGCGAGAAGACGGTTGTGTGCAAACACTGGCTGCGGGGGCTGTGCAAGAAGGGGGACCAGTGCGAGTTCCTGCACGAGTACGACATGACCAAGATGCCCGAGTGCTACTTCTACTCGAAGTTCGGGGAGTGCAGCAACAAGGAGTGCCCCTTCCTGCACATCGACCCCGAGTCCAAGATCAAGGACTGTCCTTGGTACGACCGTGGCTTCTGCAAGCATGGCCCCCTGTGCAGGCACCGGCACACGCGGAGGGTCATCTGTGTGAATTACCTCGTGGGATTCTGCCCGGAGGGGCCCTCGTGTAAATTCATGCACCCTAGATTTGAACTGCCGATGGGAACCACCGAGCAGCCCCCACTGCCGCAGCAGACGCAGCCTCCCGCAAAGGTACCGTGCCCCGGGCCCGTGGTGCTGCCGGGCCTGGCCGCGCCCTGGCCGCGGAACGCTCAGTGCCCCCGCCTCAGTGCGGGGCCTGCCGGAGACCCGGCTGGAGATCGTGGGAGGAGGCGGGAGAGGAGGAGAGTCACCCTGGTTCCTGCTGAAACTCCAGGGAGCGGAGCAGTGTGCACCTTCTCTGGGCTGGAGGGCTGTCTGCTGGAGCCAGACGCCCACCGGGCTTCTCTTCCCTTCTTGCCTGGCGAGTGCAGGGCGGCGTGGGCGCCACACATCTGCCGTTCTTGCTTGCGGTTCAGACCCTTCCCTCTACAAACGGGACTCCCAGCGGGGCGGGAGTGGAAGTGTGGCTCACTGGTTCTCTGGCCAGTGCCCGACTGCAGGGGGGATGCTGGGAACAGAGGGTCGAGGCATCAGCTGGCTCCAGTCTCCTAA

Related Sequences

bmy_13993T0 Protein

Length: 370 aa      View alignments
>bmy_13993T0
GPCAAGPTAGRGVRAAGDLSGSRAGVAAAATATMQEIIASVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPSCKFMHPRFELPMGTTEQPPLPQQTQPPAKVPCPGPVVLPGLAAPWPRNAQCPRLSAGPAGDPAGDRGRRRERRRVTLVPAETPGSGAVCTFSGLEGCLLEPDAHRASLPFLPGECRAAWAPHICRSCLRFRPFPLQTGLPAGREWKCGSLVLWPVPDCRGDAGNRGSRHQLAPVS*