KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:52 2014 Check: 00 .. Name: BACU012109/1-259 Len: 426 Check: 2435 Weight: 1.00 Name: bmy_13993T0/1-369 Len: 426 Check: 4711 Weight: 1.00 Name: ENSTTRP00000002821/1-269 Len: 426 Check: 2596 Weight: 1.00 Name: ENSP00000292476/1-269 Len: 426 Check: 9445 Weight: 1.00 Name: ENSBTAP00000002701/1-243 Len: 426 Check: 7324 Weight: 1.00 // 1 50 BACU012109/1-259 ---------- ---------- ---------- ---------- ---------- bmy_13993T0/1-369 GPCAAGPTAG RGVRAAGDLS GSRAGVAAAA TATMQEIIAS VDHIKFDLEI ENSTTRP00000002821/1-269 ---------- ---------- ---------- ---MQEIIAS VDHIKFDLEI ENSP00000292476/1-269 ---------- ---------- ---------- ---MQEIIAS VDHIKFDLEI ENSBTAP00000002701/1-243 ---------- ---------- ---------- ---MQEIIAS VDHIKFDLEI 51 100 BACU012109/1-259 --------MP SPCRPRDRLV SLVFCFLLFF V--------- --------FV bmy_13993T0/1-369 AVEQQLGAQP LPFPGMDKSG AAVCEFFLKA ACGKGGMCPF RHISGEKTVV ENSTTRP00000002821/1-269 AVEQQLGAQP LPFPGMDKSG AAVCEFFLKA ACGKGGMCPF RHISGEKTVV ENSP00000292476/1-269 AVEQQLGAQP LPFPGMDKSG AAVCEFFLKA ACGKGGMCPF RHISGEKTVV ENSBTAP00000002701/1-243 AVEQQLGAQP LPFPGMDKSG AAVCEFFLKA ACGKGGMCPF RHISGEKTVV 101 150 BACU012109/1-259 CLH---GVFR AAAPATVTRR FFSTYSPEPG HHGSPSSCRS RSC------- bmy_13993T0/1-369 CKHWLRGLCK KGDQCEFLHE YDMTKMPECY FYSKFGECSN KECPFLHIDP ENSTTRP00000002821/1-269 CKHWLRGLCK KGDQCEFLHE YDMTKMPECY FYSKFGECSN KECPFLHIDP ENSP00000292476/1-269 CKHWLRGLCK KGDQCEFLHE YDMTKMPECY FYSKFGECSN KECPFLHIDP ENSBTAP00000002701/1-243 CKHWLRGLCK KGDQCEFLHE YDMTKMPECY FYSKFGECSN KECPFLHIDP 151 200 BACU012109/1-259 ---------- ---------- ---------- ---------- -GRSPALFFP bmy_13993T0/1-369 ESKIKDCPWY DRGFCKHGPL CRHRHTRRVI CVNYLVGFCP EGPSCKFMHP ENSTTRP00000002821/1-269 ESKIKDCPWY DRGFCKHGPL CRHRHTRRVI CVNYLVGFCP EGPSCKFMHP ENSP00000292476/1-269 ESKIKDCPWY DRGFCKHGPL CRHRHTRRVI CVNYLVGFCP EGPSCKFMHP ENSBTAP00000002701/1-243 ESKIKDCPWY DRGFCKHGPL CRHRHTRRVI CVNYLVGFCP EGPSCKFMHP 201 250 BACU012109/1-259 ---VPIGSLR ARVFRSKTVL YNSFQQSNNP PLQRSSSLIQ LTSQNSSPN- bmy_13993T0/1-369 RFELPMGTTE QPPLPQQTQ- -PPAKVPCPG PVVLPGLAAP WPRNAQCPRL ENSTTRP00000002821/1-269 RFELPMGTTE QPPLPQQTQ- -PPAKXXXXX XXXXXXXXXX XXXXXXXXX- ENSP00000292476/1-269 RFELPMGTTE QPPLPQQTQ- -PPAKQSNNP PLQRSSSLIQ LTSQNSSPN- ENSBTAP00000002701/1-243 RFELPMGTTE QPPLPQQTQ- -PPTK----- ---------- ---------- 251 300 BACU012109/1-259 ---------- ---QQRAPQV IGVMQSQNSS AG-------- ---------N bmy_13993T0/1-369 SAGPAGDPAG DRGRRRERRR VTLVPAETPG SGAVCTFSGL EGCLLEPDAH ENSTTRP00000002821/1-269 ---------- ---XXXXXXX XXXXXXXXXX XX-------- ---------X ENSP00000292476/1-269 ---------- ---QQRTPQV IGVMQSQNSS AG-------- ---------N ENSBTAP00000002701/1-243 ---------- -----RTPQV IGVMQSQNSS AG-------- ---------S 301 350 BACU012109/1-259 RGPRPLEQVT CYKPVWRERT LRQQMHQRA- ------PGLS QWTVTAAAAA bmy_13993T0/1-369 RASLPFLPGE C-RAAWAPHI CRSCLRFRPF PLQTGLPAGR EWKCGSLVLW ENSTTRP00000002821/1-269 XXXXXXXXXX X--------- ---------- ---------- -XXCGEK--- ENSP00000292476/1-269 RGPRPLEQVT C--------- ---------- ---------- -YKCGEK--- ENSBTAP00000002701/1-243 RGPRPLEQVT C--------- ---------- ---------- -YKCGEK--- 351 400 BACU012109/1-259 QSSPRRPVTG DPLGHPGECA FTCSMLVELW LELAGRHIGF YSEGLRLSVS bmy_13993T0/1-369 PVPDCR---- ------GDAG NRGSR----- -----HQLAP VS-------- ENSTTRP00000002821/1-269 ---------- ------GHYA NRCTK----- -----GHLAF LSGQ------ ENSP00000292476/1-269 ---------- ------GHYA NRCTK----- -----GHLAF LSGQ------ ENSBTAP00000002701/1-243 ---------- ------GHYA NRCTK----- -----GHLAF LSGQ------ 401 450 BACU012109/1-259 LSFCCNLFLK GDMCSSSVPQ VGIMFV bmy_13993T0/1-369 ---------- ---------- ------ ENSTTRP00000002821/1-269 ---------- ---------- ------ ENSP00000292476/1-269 ---------- ---------- ------ ENSBTAP00000002701/1-243 ---------- ---------- ------