Part of scaffold_951 (Scaffold)

For more information consult the page for scaffold_951 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TAF6 ENSTTRG00000012315 (Bottlenosed dolphin)

Gene Details

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011683, Bottlenosed dolphin)

Protein Percentage 90.18%
cDNA percentage 88.91%
Ka/Ks Ratio 0.03379 (Ka = 0.003, Ks = 0.0892)

TAF6 ENSBTAG00000030966 (Cow)

Gene Details

transcription initiation factor TFIID subunit 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000048341, Cow)

Protein Percentage 98.31%
cDNA percentage 93.4%
Ka/Ks Ratio 0.02414 (Ka = 0.0076, Ks = 0.3147)

TAF6  (Minke Whale)

Gene Details

TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa

External Links

Gene match (Identifier: BACU012093, Minke Whale)

Protein Percentage 94.98%
cDNA percentage 95.29%
Ka/Ks Ratio 0.39866 (Ka = 0.0369, Ks = 0.0926)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2220 bp    Location:23732..32102   Strand:+
>bmy_13975
CTTATTCCGGCTCGTGGAAGGGGCAGTGACCTGCTCTCGGTCTCTGCCAGGACCTGTTCCTGGAGGGGGCGGGGCCAACATGGCGCCGAGCGCCGGTTGAGCGGCGCTTTGGCGGCGGGTCTCCATCTCTCCGCCCTGGGGCATCTTCCTTCGGGGGAGGGGAGGAGGGGCTCCAGAATGGCTGAGGAGAAGAAGCTGAAGCTGAGCAACACCGTGCTGCCCTCGGAGTCCATGAAGGTGGTGGCCGAGTCCATGGGCATCGCTCAGATTCAGGAGGAGACCTGCCAGCTGCTGACAGATGAGGTCAGCTACCGCATCAAGGAGATTGCACAGGATGCCTTGAAGTTCATGCACATGGGGAAGCGGCAGAAGCTCACCACCAGTGACATTGACTACGCACTGAAGCTAAAGAACGTCGAGCCACTGTATGGCTTCCACGCTCAGGAGTTCATTCCTTTCCGTTTCGCCTCTGGTGGCGGCCGGGAGCTTTACTTCTACGAGGAGAAGGAGGTTGATCTGAGCGACATCATCAATACCCCTCTGCCCCGGGTGCCCCTGGATGTCTGCCTCAAAGCTCACTGGCTGAGCATTGAAGGCTGCCAGCCAGCTATTCCAGAGAACCCACCCCCAGGTAACCTCCGTGCCCAGCGTCCAGCACCCACCCCTCTCCCTCCTCCTCCCTTTACATCCCCTGCCTTGACTGCTTTCCCACCAGCTCCCAAAGAGCAGCAGAAGGCTGAGGCCACGGAGCCCCTGAAGTCAGCGAAGCCGGGCCAGGAGGAAGACGGCCCCTTGAAAGGCAAAGGTCAGGGGGCCGCTCCAGCTGACAGCAAAGGGAAAGAGAAGAAGGCGCCACCCCTGCTGGAGGGGGCCCCTCTGCGGCTGAAGCCCCGAAGCATCCACGAGCTGTCTGTGGAGCAACAGCTGTACTACAAGGAGATCACAGAAGCCTGTGTGGGCTCGTGTGAGGCCAAGCGAGCGGTGCGCGTGAACGTGGTGCAGAACAACCTGGCCCTGCTCATCTACCTGATGCGCATGGTGAAGGCGCTGATGGACAACCCTACTCTGTATCTAGAGAAATACGTGCACGAGTTGATCCCTGCTGTGATGACCTGCATCGTGAGCAGACAGCTGTGCCTGCGGCCAGACGTGGACAATCACTGGGCACTCCGGGACTTTGCCGCCCGCCTGGTGGCCCAGATCTGCAAGCACTTCAGCACGACCACGAACAACATCCAGTCCCGCATCACCAAGACCTTCACCAAGAGCTGGGTGGACGAGAAGACCCCGTGGACAACGCGCTACGGGTCCATCGCAGGCCTGGCAGAGCTGGGACACGACGTGATTAAGACTCTGATTCTGCCACGGCTACAGCAGGAGGGGGAGCGGATCCGTGGGGTCCTGGATGGCCCCGTGCTGAGCAACATCGACCGCATCGGGGCTGACCACGTGCAGAGCCTCCTCCTGAAACACTGTGCCCCTGTTCTGGCAAAGCTGCGCCCACCGCCTGACAATCAGGATGCCTATCGGGCAGAATTTGGGTCCCTCGGGCCCCTCCTCTGCTCCCACGTTGTCAAGGCCCGGGCCCAGGCTGCTCTGCAGGCTCAGCAGGTCAACAGGACCACTCTGACCATCACTCAGCCCCGGCCCACGCTGACCCTCTCACAGGCCCCCCAGCCTGGCCCTCGGACCCCTGGCTTGCTGAAGGTCCCTGGCTCCATCGCGCTGCCTGTCCAGACACTGGTGTCTGCTCGAGCTGCTGCCCCGCCTCAGCCTTCCCCTCCCCCAACCAAGTTCATCGTCATGTCATCATCCTCCAGCGCCTCATCCACCCAACAGGTCCTGTCCCTCAGCACCTCGGCCCCTGGCTCAGGCTCCACCACTACCTCTCCTGTCACCACCACCGTCCCCAGCGTGCAGCCCATTGTCAAGCTGGTCTCCACCGCCACAAGCGCGCCCCCCAGCACTGCCCCCTCTGGTCCCGGCAGTGTCCAGAAGTACATCGTGGTCTCTCTTCCCCCCACAGGGGAGGGCAAAGGAGGCCCCACCTCCCATCCTTCTCCAGCCCCTCCCCCGACCTCAGCCCCGTCCCCGCTTGGGGTCAGTGCCCTATGTGGGGGGAAACCGGAAACTGGGGAGAGCCCCCCTCCCGCTCCAGGGACTCCGAAGGCTAATGGCTCACAGCCCCCCGGATCTGGCTCTCCTCCGCCTGCGCCTTGA

Related Sequences

bmy_13975T0 Protein

Length: 740 aa      View alignments
>bmy_13975T0
LIPARGRGSDLLSVSARTCSWRGRGQHGAERRLSGALAAGLHLSALGHLPSGEGRRGSRMAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEVSYRIKEIAQDALKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEVDLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPGNLRAQRPAPTPLPPPPFTSPALTAFPPAPKEQQKAEATEPLKSAKPGQEEDGPLKGKGQGAAPADSKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEITEACVGSCEAKRAVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHFSTTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGERIRGVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLCSHVVKARAQAALQAQQVNRTTLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQTLVSARAAAPPQPSPPPTKFIVMSSSSSASSTQQVLSLSTSAPGSGSTTTSPVTTTVPSVQPIVKLVSTATSAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPAPPPTSAPSPLGVSALCGGKPETGESPPPAPGTPKANGSQPPGSGSPPPAP*