KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:58:52 2014 Check: 00 .. Name: ENSTTRP00000011683/1-678 Len: 788 Check: 1895 Weight: 1.00 Name: ENSP00000399982/1-714 Len: 788 Check: 7383 Weight: 1.00 Name: BACU012093/1-660 Len: 788 Check: 2392 Weight: 1.00 Name: bmy_13975T0/1-739 Len: 788 Check: 3904 Weight: 1.00 Name: ENSBTAP00000048341/1-678 Len: 788 Check: 8661 Weight: 1.00 // 1 50 ENSTTRP00000011683/1-678 ---------- ---------- ---------- ---------- ---------- ENSP00000399982/1-714 ---------- ---------- --MTKRRLQT ITACLQLREG SPSLHRGLHP BACU012093/1-660 ---------- ---------- ---------- ---------- ---------- bmy_13975T0/1-739 LIPARGRGSD LLSVSARTCS WRGRGQHGAE RRLSGALAAG LHLSALGHLP ENSBTAP00000048341/1-678 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011683/1-678 ---------M AEEKKLKLSN TVLPSESMKV VAESMGIAQI QEETCQLLTD ENSP00000399982/1-714 SREEKRDSRM AEEKKLKLSN TVLPSESMKV VAESMGIAQI QEETCQLLTD BACU012093/1-660 ---------M AEEKKLKLSN TVLPSESMKV VAESMGIAQI QEETCQLLTD bmy_13975T0/1-739 SGEGRRGSRM AEEKKLKLSN TVLPSESMKV VAESMGIAQI QEETCQLLTD ENSBTAP00000048341/1-678 ---------M AEEKKLKLSN TVLPSESMKV VAESMGIAQI QEETCQLLTD 101 150 ENSTTRP00000011683/1-678 EVSYRIKEIA QDALKFMHMG KRQKLTTSDI DYALKLKNVE PLYGFHAQEF ENSP00000399982/1-714 EVSYRIKEIA QDALKFMHMG KRQKLTTSDI DYALKLKNVE PLYGFHAQEF BACU012093/1-660 EVSYRIKEIA QDALKFMHMG KRQKLTTSDI DYALKLKNVE PLYGFHAQEF bmy_13975T0/1-739 EVSYRIKEIA QDALKFMHMG KRQKLTTSDI DYALKLKNVE PLYGFHAQEF ENSBTAP00000048341/1-678 EVSYRIKEIA QDALKFMHMG KRQKLTTSDI DYALKLKNVE PLYGFHAQEF 151 200 ENSTTRP00000011683/1-678 IPFRFASGGG RELYFYEEKE VDLSDIINTP LPRVPLDVCL KXXXXXXXXX ENSP00000399982/1-714 IPFRFASGGG RELYFYEEKE VDLSDIINTP LPRVPLDVCL KAHWLSIEGC BACU012093/1-660 IPFRFASGGG RELYFYEEKE VDLSDIINTP LPRVPLDVCL KAHWLSIEGC bmy_13975T0/1-739 IPFRFASGGG RELYFYEEKE VDLSDIINTP LPRVPLDVCL KAHWLSIEGC ENSBTAP00000048341/1-678 IPFRFASGGG RELYFYEEKE VDLSDIINTP LPRVPLDVCL KAHWLSIEGC 201 250 ENSTTRP00000011683/1-678 XXXXXXXX-- ---------- ---------- ------XXXX XXXXXXXXXX ENSP00000399982/1-714 QPAIPENP-- ---------- ---------- ------PPAP KEQQKAEATE BACU012093/1-660 QPAIPENP-- ---------- ---------- ------PPAP KEQQKAEATE bmy_13975T0/1-739 QPAIPENPPP GNLRAQRPAP TPLPPPPFTS PALTAFPPAP KEQQKAEATE ENSBTAP00000048341/1-678 QPAIPENP-- ---------- ---------- ------PPAP KEQQKAEATE 251 300 ENSTTRP00000011683/1-678 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXK EKKAPPLLEG APLRLKPRSI ENSP00000399982/1-714 PLKSAKPGQE EDGPLKGKGQ GATTADGKGK EKKAPPLLEG APLRLKPRSI BACU012093/1-660 PLKSAKPGQE EDGPLKGKGQ GATPADGKAR ---------- ---------- bmy_13975T0/1-739 PLKSAKPGQE EDGPLKGKGQ GAAPADSKGK EKKAPPLLEG APLRLKPRSI ENSBTAP00000048341/1-678 PLKSAKPGQE EDGPLKGKGQ GAAPADGKGK EKKAPPLLEG APLRLKPRSI 301 350 ENSTTRP00000011683/1-678 HELSVEQQLY YKEITEACVG SCEAKRAEAL QSIATDPGLY QMLPRFSTFI ENSP00000399982/1-714 HELSVEQQLY YKEITEACVG SCEAKRAEAL QSIATDPGLY QMLPRFSTFI BACU012093/1-660 ---------- WSFV------ -----KWEAL QSIATDPGLY QMLPRFSTFI bmy_13975T0/1-739 HELSVEQQLY YKEITEACVG SCEAKRA--- ---------- ---------- ENSBTAP00000048341/1-678 HELSVEQQLY YKEITEACVG SCEAKRAEAL QSIATDPGLY QMLPRFSTFI 351 400 ENSTTRP00000011683/1-678 SEGVRVNVVQ NNLALLIYLM RMVKALMDNP TLYLEKYVHE LIPAVMTCIV ENSP00000399982/1-714 SEGVRVNVVQ NNLALLIYLM RMVKALMDNP TLYLEKYVHE LIPAVMTCIV BACU012093/1-660 SEGVRVNVVQ NNLALLIYLM RMVKALMDNP TLYLEKYVHE LIPAVMTCIV bmy_13975T0/1-739 ---VRVNVVQ NNLALLIYLM RMVKALMDNP TLYLEKYVHE LIPAVMTCIV ENSBTAP00000048341/1-678 SEGVRVNVVQ NNLALLIYLM RMVKALMDNP TLYLEKYVHE LIPAVMTCIV 401 450 ENSTTRP00000011683/1-678 SRQLCLRPDV DNHCALRDFA ARLVAQICKH FSTTTNNIQS RITKTFTKS- ENSP00000399982/1-714 SRQLCLRPDV DNHWALRDFA ARLVAQICKH FSTTTNNIQS RITKTFTKS- BACU012093/1-660 SRQLCLRPDV DNHWALRDFA ARLVAQICKH FSTTTNNIQS RITKTFTKSW bmy_13975T0/1-739 SRQLCLRPDV DNHWALRDFA ARLVAQICKH FSTTTNNIQS RITKTFTKS- ENSBTAP00000048341/1-678 SRQLCLRPDV DNHWALRDFA ARLVAQICKH FSTTTNNIQS RITKTFTKS- 451 500 ENSTTRP00000011683/1-678 ---------- ---------- --WVDEKTPW TTRYGSIAGL AELGHDVIKT ENSP00000399982/1-714 ---------- ---------- --WVDEKTPW TTRYGSIAGL AELGHDVIKT BACU012093/1-660 VDEKTPWTTR YGSIAGPMKM CSWVDEKTPW TTRYGSIAGL AELGHDVIKT bmy_13975T0/1-739 ---------- ---------- --WVDEKTPW TTRYGSIAGL AELGHDVIKT ENSBTAP00000048341/1-678 ---------- ---------- --WVDEKTPW TTRYGSIAGL AELGHDVIKT 501 550 ENSTTRP00000011683/1-678 LILPRLQQEG ERIRGVLDGP VLSNIDRIGA DHVQSLLLKH CAPVLAKLRP ENSP00000399982/1-714 LILPRLQQEG ERIRSVLDGP VLSNIDRIGA DHVQSLLLKH CAPVLAKLRP BACU012093/1-660 LILPRLQQEG ERIRGVLDGP VLSNIDRIGA DHVQSLLLKH CAPVLAKLRP bmy_13975T0/1-739 LILPRLQQEG ERIRGVLDGP VLSNIDRIGA DHVQSLLLKH CAPVLAKLRP ENSBTAP00000048341/1-678 LILPRLQQEG ERIRGVLDGP VLSNIDRIGA DHVQSLLLKH CAPVLAKLRP 551 600 ENSTTRP00000011683/1-678 PPDNQDAYRA EFGSLGPLLC SHVVKARAQA ALQAQQVNRT TLTITQPRPT ENSP00000399982/1-714 PPDNQDAYRA EFGSLGPLLC SQVVKARAQA ALQAQQVNRT TLTITQPRPT BACU012093/1-660 PPDNQDAYRA EFGSLGPLLC SHVVKARAQA ALQAQQVNRT TLTITQPRPT bmy_13975T0/1-739 PPDNQDAYRA EFGSLGPLLC SHVVKARAQA ALQAQQVNRT TLTITQPRPT ENSBTAP00000048341/1-678 PPDNQDAYRA EFGSLGPLLC SHVVKARAQA ALQAQQVNRT TLTITQPRPT 601 650 ENSTTRP00000011683/1-678 LTLSQAPQPG PRTPGLLKVP GSIALPVQTL VSARAAAPPQ PSPPPTKFIV ENSP00000399982/1-714 LTLSQAPQPG PRTPGLLKVP GSIALPVQTL VSARAAAPPQ PSPPPTKFIV BACU012093/1-660 LTLSQAPQPG PRTPGLLKVP GSIALPVQTL VSARAAAPPQ PSPPPTKFIV bmy_13975T0/1-739 LTLSQAPQPG PRTPGLLKVP GSIALPVQTL VSARAAAPPQ PSPPPTKFIV ENSBTAP00000048341/1-678 LTLSQAPQPG PRTPGLLKVP GSIALPVQTL VSTRAAAPPQ PSPPPTKFIV 651 700 ENSTTRP00000011683/1-678 MSSSSSASST QQVLSLSTSA PGSGSTTTSP VTTTVPSVQP IVKLVSTATS ENSP00000399982/1-714 MSSSSSAPST QQVLSLSTSA PGSGSTTTSP VTTTVPSVQP IVKLVSTATT BACU012093/1-660 MSSSSSASST QQVLSLSTSA PGSGSTTTSP VTTTVPSVQP IVKLVSTATS bmy_13975T0/1-739 MSSSSSASST QQVLSLSTSA PGSGSTTTSP VTTTVPSVQP IVKLVSTATS ENSBTAP00000048341/1-678 MSSSSSASST QQVLSLSTSA PGSGSTTTSP VTTTVPSVQP IVKLVSTATT 701 750 ENSTTRP00000011683/1-678 APPSTAPSGP GSVQKYIVVS LPPTGEGKGG PTSHPSPAPP PTSAPSPLGV ENSP00000399982/1-714 APPSTAPSGP GSVQKYIVVS LPPTGEGKGG PTSHPSPVPP PASSPSPLSG BACU012093/1-660 APPSTAPSGP GSVQKYIVVS LPPTGEGKGG PTSHPSPAPP PTSAPSPLGV bmy_13975T0/1-739 APPSTAPSGP GSVQKYIVVS LPPTGEGKGG PTSHPSPAPP PTSAPSPLGV ENSBTAP00000048341/1-678 APPSTAPAGP GSVQKYIVVS LPPTGEGKGG PASHPSPVPT PTSAPSPLGG 751 800 ENSTTRP00000011683/1-678 SALCGGKPEA GESPPPAPGT PKANGSQPPG CGSPPPAP ENSP00000399982/1-714 SALCGGKQEA GDSPPPAPGT PKANGSQ-PN SGSPQPAP BACU012093/1-660 SALCGGKPET GESPPPAPGT PKANGSQPPG SGSPPPAP bmy_13975T0/1-739 SALCGGKPET GESPPPAPGT PKANGSQPPG SGSPPPAP ENSBTAP00000048341/1-678 SALCGGKPEA GESPPPAPGT PKANGSQPPG TGSPPPAP