Part of scaffold_931 (Scaffold)

For more information consult the page for scaffold_931 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LRRC52 ENSTTRG00000003660 (Bottlenosed dolphin)

Gene Details

leucine rich repeat containing 52

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003430, Bottlenosed dolphin)

Protein Percentage 83.54%
cDNA percentage 85.19%
Ka/Ks Ratio 0.34983 (Ka = 0.0313, Ks = 0.0894)

LRRC52 ENSBTAG00000001686 (Cow)

Gene Details

leucine-rich repeat-containing protein 52 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002199, Cow)

Protein Percentage 89.39%
cDNA percentage 91.7%
Ka/Ks Ratio 0.18955 (Ka = 0.0501, Ks = 0.2644)

LRRC52  (Minke Whale)

Gene Details

leucine rich repeat containing 52

External Links

Gene match (Identifier: BACU014438, Minke Whale)

Protein Percentage 98.37%
cDNA percentage 98.37%
Ka/Ks Ratio 0.15702 (Ka = 0.0074, Ks = 0.047)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 738 bp    Location:485976..502593   Strand:+
>bmy_13964
ATGAATCTAGGACTCCTCAGTGACCTTGTTTACTTGGACTGTCAGAAGAACCTGATTCAGGAGGTGATGGATTATACCTTCGTCGGGGTCTTCAAACTCATCTACCTCGATCTCAGCCTCAACAATTTAACCTTGATCTCCCCGTACAGTTTCTCCGTGCTCAGCAACCTGGTGCAGCTGAACATCTCCAGCAACCCTCATCTGTTATCACTCAACAAGTACACCTTTGCCAACACCAGCTCTTTGAGGTACCTGGACCTCAGGAATACCGGCTTGCAGACCTTGGACCATGCCGCCTTCCATAACCTCATAACACTCCAGACCCTGTATCTGAGTGGAAACCCCTGGAAATGCAACTGCTCTTTCCTGGACTTCACCATCTACTTAATAGTGTCCCCTCTGAACCATCCAGACGAACAAAATGCCACGTGCCTGGAGCCCACAGAACTGGCAGGGTGGCCCATCACGAAGGTGGGGAACCCGCTCCGGTACATGTGCGTCACGCACCTGGACCGCCAAGACTACATCTTCCTGCTGCTCATCGGCTTCTGCATCTTCTCCGCGGGCACCGTGGCCGCCTGGCTGACGGGCGTGTGCGCCGTGCTCTACCAGAACGCCCGCCGCAGATCGAGCGAGGATGACGCAGAGGACGAGCACGGGCAGAGGGTGGAAGTCAGCAGGAGGATTTTTCAAAGCAGGGTGGACTCTGGCCAGGACGGGTTTCCTCAGTTGATTTAG

Related Sequences

bmy_13964T0 Protein

Length: 246 aa      View alignments
>bmy_13964T0
MNLGLLSDLVYLDCQKNLIQEVMDYTFVGVFKLIYLDLSLNNLTLISPYSFSVLSNLVQLNISSNPHLLSLNKYTFANTSSLRYLDLRNTGLQTLDHAAFHNLITLQTLYLSGNPWKCNCSFLDFTIYLIVSPLNHPDEQNATCLEPTELAGWPITKVGNPLRYMCVTHLDRQDYIFLLLIGFCIFSAGTVAAWLTGVCAVLYQNARRRSSEDDAEDEHGQRVEVSRRIFQSRVDSGQDGFPQLI*