KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:16:56 2014 Check: 00 .. Name: ENSP00000294818/1-313 Len: 320 Check: 4986 Weight: 1.00 Name: ENSTTRP00000003430/1-313 Len: 320 Check: 9812 Weight: 1.00 Name: ENSBTAP00000002199/1-320 Len: 320 Check: 2194 Weight: 1.00 Name: bmy_13964T0/1-245 Len: 320 Check: 3319 Weight: 1.00 Name: BACU014438/1-298 Len: 320 Check: 6599 Weight: 1.00 // 1 50 ENSP00000294818/1-313 MSLASGPGPG WLLFSFGMGL VSGSKCPNNC LCQAQEVICT GKQLTEYPLD ENSTTRP00000003430/1-313 MSRASGPGPG WLLFSFGMGL VSGSRCPNNC QCQAQEVICT GVQLTEYPSD ENSBTAP00000002199/1-320 MSLASDPRPG WLLFSFGMVL VSGSKCPNNC QCQDQEVICT GIQLTEYPSD bmy_13964T0/1-245 ---------- ---------- ---------- ---------- ---------- BACU014438/1-298 ---------- -------MGL VSGSRCPNNC QCQAQEVICS GVQLTEYPSD 51 100 ENSP00000294818/1-313 IPLNTRRLFL NENRITSLPA MHLGLLSDLV YLDCQNNRIR EVMDYTFIGV ENSTTRP00000003430/1-313 IPLNTRRLYL NENSIRFLPA MNLGLLSDLV YLDCQKNLIQ EVMDYTFVGV ENSBTAP00000002199/1-320 IPLNTRRLYL NDNKIRFLPA MNLGLLSDLV YLDCQKNRIQ EVMDYTFVGV bmy_13964T0/1-245 ---------- ---------- MNLGLLSDLV YLDCQKNLIQ EVMDYTFVGV BACU014438/1-298 IPLNTRRLYL NDNSIRFLPA MNLGLLSDLV YLDCQKNLIQ EVMDYTFVGV 101 150 ENSP00000294818/1-313 FKLIYLDLSS NNLTSISPFT FSVLSNLVQL NIANNPHLLS LHKFTFANTT ENSTTRP00000003430/1-313 FKLIYLDLSF NNLTLISPYS FSMLSNLVQL NISSNPHLLS LNKYTFANTS ENSBTAP00000002199/1-320 FRLIYLDLSF NNLTFISPYS FSMLSNLLQL NISNNPHLLS LNKYTFANTS bmy_13964T0/1-245 FKLIYLDLSL NNLTLISPYS FSVLSNLVQL NISSNPHLLS LNKYTFANTS BACU014438/1-298 FKLIYLDLSF NNLTLISPYS FSVLSNLVQL NISSNPHLLS LNKYTFANTS 151 200 ENSP00000294818/1-313 SLRYLDLRNT GLQTLDSAAL YHLTTLETLF LSGNPWKCNC SFLDFAIFLI ENSTTRP00000003430/1-313 SLRYLDLRNT GLQTLDPAAF HNLITLQTLY LSGNPWKCNC SFLDFTIYLI ENSBTAP00000002199/1-320 SLRYLDLRNT GLQTLDEAAF QNLITLQTLY LSGNPWKCNC FFLDFTIYLI bmy_13964T0/1-245 SLRYLDLRNT GLQTLDHAAF HNLITLQTLY LSGNPWKCNC SFLDFTIYLI BACU014438/1-298 SLRYLDLRNT GLQTLDHAAF HNLITLQTLY LSGNPWKCNC SFLDFTVYLI 201 250 ENSP00000294818/1-313 VFHMDPSDDL NATCVEPTEL TGWPITRVGN PLRYMCITHL DHKDYIFLLL ENSTTRP00000003430/1-313 MSPVNHPDE- NATCLEPTKL AV-PITKVGE PXXXXXXXXX XXXXXXXXXX ENSBTAP00000002199/1-320 VSHLNYPDEQ NATCVEPTEL AGWPITKVGN PLRYMCITNL DLQDYIFLLL bmy_13964T0/1-245 VSPLNHPDEQ NATCLEPTEL AGWPITKVGN PLRYMCVTHL DRQDYIFLLL BACU014438/1-298 VSPLNHPDEQ NATCLEPTEL AGWPITKVGN PLRYMCVTHL DRQDYIFLLL 251 300 ENSP00000294818/1-313 IGFCIFAAGT VAAWLTGVCA VLYQNTRHKS SE------ED EDEAGTRVEV ENSTTRP00000003430/1-313 XXXXXXXXGT VDAWLTGVCA VLYQNARRRS SED-----EA EDELGQRVEA ENSBTAP00000002199/1-320 ISFCIFCAGT VAAWLTGVCA VLYQNACRKS SEDEVEEEEA ENEDEQRVEV bmy_13964T0/1-245 IGFCIFSAGT VAAWLTGVCA VLYQNARRRS SED-----DA EDEHGQRVEV BACU014438/1-298 IGFCIFSAGT VAAWLTGVCA VLYQNARRRS SED-----EA EDEHGQRVEV 301 350 ENSP00000294818/1-313 SRRIFQTQTS SVQE-FPQLI ENSTTRP00000003430/1-313 SRRIFQSRVE SGQDGFPQLI ENSBTAP00000002199/1-320 SRRIFHSRVD SGHDGFPQLI bmy_13964T0/1-245 SRRIFQSRVD SGQDGFPQLI BACU014438/1-298 SRRIFQSRVD SSQDGFPQLI