Part of scaffold_917 (Scaffold)

For more information consult the page for scaffold_917 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CDH6 ENSTTRG00000004202 (Bottlenosed dolphin)

Gene Details

cadherin 6, type 2, K-cadherin (fetal kidney)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003961, Bottlenosed dolphin)

Protein Percentage 91.97%
cDNA percentage 92.81%
Ka/Ks Ratio 0.46668 (Ka = 0.0615, Ks = 0.1317)

CDH6 ENSBTAG00000012992 (Cow)

Gene Details

Cadherin-6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017274, Cow)

Protein Percentage 89.82%
cDNA percentage 89.03%
Ka/Ks Ratio 0.25982 (Ka = 0.074, Ks = 0.2849)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2562 bp    Location:546197..590279   Strand:+
>bmy_13904
ATGAACCAAAAGTGCCCAGTTGATGATTCCACTAATGTTCAGTCTCATTCTCTGAAGTCAAGTATTATGGGCCAGAAGATGGTGCCAAAGCAGCTAAGGCAGCTGCAAACACAACTCAACACCAGCAATTCAGAGGGCCAACTACACTGTGCAGATAATTCAACTGCTCATCTAAACATCACTTACTTGAGTTTTAAAACGATAATGAGACAGTCAGAATCTTTACTGCAATTCAAACCATCGAGTAACTTCAAAGAAGGGGAGGGTGCTGGATGGGGAGGGACAGAACAGAAAACACAACACAAGGGAAATCATCCCCTGGCAGGCAATCGTGTGGTGGAGGAGAAGCTCCTTTTAGCTCCTGGGCTTCTCCAGGGCAAGAAAAGGGTGGATGATCTCTTTGATGGTACCTACCAAGGACAAATCAACCCTGTGGCTAAGTCCACATTTGCCAAGGGCAATGGAGGAGTGATACTCAGACATCAGGGGTTACATTCAGACCAGGATAGAGGAGATGGATCACTTAAATATATCCTTTCAGGAGATGGAGCAGGAGATCTCTTCATTATCAATGAAAACACAGGGGATATACAGGCCACCAAGAGGCTGGACAGGGAAGAAAAACCTGTTTACATCCTTCGAGCTCAGGCCATAAACAGAAAAACAGGGAGACCCGTGGAGCCCGAGTCTGAATTCATCATCAAGATCCATGACATCAATGACAATGAACCAATATTCACCAAGGAGGTTTACACAGCCACTGTTCCCGAAATGTCTGATGTCGGCACATTTGTTGTCCAAGTCAGTGCAACTGATGCTGATGATCCAACGTACGGAAACAGTGCCAAAATTGTCTATAGCATCCTACAGGGGCAGCCCTATTTTTCAGTTGAATCAGAAACAGGTATCATCAAGACAGCCTTGCTCAACATGGATCGTGAAAACAGGGAGCAGTACCAAGTGGTGATTCAAGCCAAGGATATGGGTGGCCAGATGGGGGGATTGTCTGGGACCACCACAGTGAACATCACGCTGACGGATGTCAATGACAACCCTCCCCGGTTTCCCCAGAGTACATACCAATTTAAAACCCCTGAATCATCTCCGCCGGGTACACCAATTGGCAGGATCAAAGCCAGCGATGCCGACCTGGGAGAAAATGCTGACATTGAGTACAGCATTACAGAGGGAGAGGGGCTGGACATGTTTGATGTCATCACCGATCAGGAAACCCAGGAAGGGATTATAACTGTCAAAAAGCTCTTGGACTTTGAAAAGAAGAAAGTGTACACCCTCAAAGTGGAAGCTTCCAACCCTCACATTGAACCCCGCTTTCTCTACCTGGGTCCATTCAAAGATTCAGCCACAGTTAAAATTATGGTGGAAGATGTAGACGAGCCCCCTGTCTTCAGCAAACTGGCCTACATCCTACAAATAAGAGAAGATGCTCAGATAAATACGACAATAGGCTCAGTCACAGCCCAAGATCCAGATGCTGCCCGGAATCCTGTCAAGTATTCTGTTGATCGACACACAGATATGGACAGAATATTCAACATCGATTCTGGAAATGGTTCAATTTTTACATCGAAACTTCTTGACCGAGAAACATTGCTGTGGCACAACATTACAGTGATAGCAACAGAGATCAATAATCCAAAGCAAAGCAGCCGAGTACCACTGTATATTAAAGTTCTAGATTTGATTCAGACCATACGAGCCGTTGACAAGGATGACCCTTACAGCGGGCACCAATTCTCGTTCTCTTTGGCCCCAGAAGCAGCCAGTGGCTCAAACTTTACCATTCAAGACAACAAAGACAACACAGCGGGAATCTTAACTCGGAAAAATGGCTATAATAGACACGAGATGAGCACCTATCTCCTGCCTGTGGTCATATCAGACAATGACTACCCAGTCCAAAGCAGCACTGGGACAGTGACTGTCCGGGTCTGTGCGTGTGACCACCAAGGGAACATGCAGTCCTGCCACGCGGAGGCCCTCGTCCACCCCACGGGGCTGAGCACGGGGGCTTTGGTTGCCATCCTGCTGTGCATCGTGACCCTACTAGTGACAGTGGTGTTGTTTGCAGCTCTCAGGCGACAGCGGAAAAAAGAACCTTTGATCATTTCCAAAGAGGACATCAGAGACAACATTGTCAGTTACAACGACGAAGGTGGGGGAGAGGAGGACACCCAGGCCTTTGATATCGGCACCCTAAGGAATCCCGAAGCCATAGAGGACAGCAAATTACGCAGGGACATTGTGCCCGAAGCCCTTTTTCTACCCCGACGGACTCCAGCAGCTTGTGATAACACCGACGTCCGAGATTTCATTAACCAAAGGTTAAAGGAAAATGACACGGACCCCACTGCCCCGCCCTACGACTCCTTGGCCACCTTCGCCTATGAGGGTACCGGCTCGGTGGCCGATTCCCTGAGCTCGCTGGAGTCGGTGACCACGGATGGAGACCAGGACTACGATTACCTTAGTGACTGGGGGCCTCGGTTCAAAAAGCTCGCAGATATGTACGGAGGGGTGGGCAGTGACAAGGACTCCTGA

Related Sequences

bmy_13904T0 Protein

Length: 854 aa      View alignments
>bmy_13904T0
MNQKCPVDDSTNVQSHSLKSSIMGQKMVPKQLRQLQTQLNTSNSEGQLHCADNSTAHLNITYLSFKTIMRQSESLLQFKPSSNFKEGEGAGWGGTEQKTQHKGNHPLAGNRVVEEKLLLAPGLLQGKKRVDDLFDGTYQGQINPVAKSTFAKGNGGVILRHQGLHSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAINRKTGRPVEPESEFIIKIHDINDNEPIFTKEVYTATVPEMSDVGTFVVQVSATDADDPTYGNSAKIVYSILQGQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQSTYQFKTPESSPPGTPIGRIKASDADLGENADIEYSITEGEGLDMFDVITDQETQEGIITVKKLLDFEKKKVYTLKVEASNPHIEPRFLYLGPFKDSATVKIMVEDVDEPPVFSKLAYILQIREDAQINTTIGSVTAQDPDAARNPVKYSVDRHTDMDRIFNIDSGNGSIFTSKLLDRETLLWHNITVIATEINNPKQSSRVPLYIKVLDLIQTIRAVDKDDPYSGHQFSFSLAPEAASGSNFTIQDNKDNTAGILTRKNGYNRHEMSTYLLPVVISDNDYPVQSSTGTVTVRVCACDHQGNMQSCHAEALVHPTGLSTGALVAILLCIVTLLVTVVLFAALRRQRKKEPLIISKEDIRDNIVSYNDEGGGEEDTQAFDIGTLRNPEAIEDSKLRRDIVPEALFLPRRTPAACDNTDVRDFINQRLKENDTDPTAPPYDSLATFAYEGTGSVADSLSSLESVTTDGDQDYDYLSDWGPRFKKLADMYGGVGSDKDS*