KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:01:00 2014 Check: 00 .. Name: bmy_13904T0/1-853 Len: 877 Check: 3832 Weight: 1.00 Name: ENSP00000265071/1-790 Len: 877 Check: 5373 Weight: 1.00 Name: ENSTTRP00000003961/1-784 Len: 877 Check: 9830 Weight: 1.00 Name: BACU015048/1-274 Len: 877 Check: 3633 Weight: 1.00 Name: ENSBTAP00000017274/1-790 Len: 877 Check: 5994 Weight: 1.00 // 1 50 bmy_13904T0/1-853 MNQKCPVDDS TNVQSHSLKS SIMGQKMVPK QLRQLQTQLN TSNSEGQLHC ENSP00000265071/1-790 ---------- MRTYRYFLLL FWVGQP---- ---------- ---------- ENSTTRP00000003961/1-784 ---------- ---MRYDTLL FWV-QP---- ---------- ---------- BACU015048/1-274 ---------- MRTYRYFLLL FWVGQP---- ---------- ---------- ENSBTAP00000017274/1-790 ---------- MRTYRYFLLL FWVGQP---- ---------- ---------- 51 100 bmy_13904T0/1-853 ADNSTAHLNI TYLSFKTIMR QSESLLQFKP SSNFKEGEGA GWGGTEQKTQ ENSP00000265071/1-790 ---------- -YPTLSTPLS KRTS------ ---------- GFPAKKRALE ENSTTRP00000003961/1-784 ---------- -YPTFST-LS KRTS------ ---------- GF-AKKRTLE BACU015048/1-274 ---------- -YPTFSTPLS KRTS------ ---------- GFPAKKRTLE ENSBTAP00000017274/1-790 ---------- -YPTFSTPLS KRTS------ ---------- GFPAKKRTLE 101 150 bmy_13904T0/1-853 HKGNHPLAGN RVVEEKLLLA PGLLQGKKRV DDLFDGTYQG QINPVAKSTF ENSP00000265071/1-790 LSGNSKNELN RSKRSWMWNQ FFLLEEYTGS DYQYVGK--- ---------- ENSTTRP00000003961/1-784 LSGNSKNELN RSIRSWMWNQ FFLLEEYTGS DYQYVGK--- ---------- BACU015048/1-274 LSGNSKNELN RSKRSWMWNQ FFLLEEYTGS DYQYVGK--- ---------- ENSBTAP00000017274/1-790 LSGNSKNELS RSKRSWMWNQ FFLLEEYTGS DYQYVGK--- ---------- 151 200 bmy_13904T0/1-853 AKGNGGVILR HQGLHSDQDR GDGSLKYILS GDGAGDLFII NENTGDIQAT ENSP00000265071/1-790 ---------- ---LHSDQDR GDGSLKYILS GDGAGDLFII NENTGDIQAT ENSTTRP00000003961/1-784 ---------- ---LHSDQDR GDGSLKYILS GDGAGDLFII NENTGDIQAT BACU015048/1-274 ---------- ---LHSDQDR GDGSLKYILS GDGAGDLFII NENTGDIQAT ENSBTAP00000017274/1-790 ---------- ---LHSDQDR GDGSLKYILS GDGAGDLFII NENTGDIQAT 201 250 bmy_13904T0/1-853 KRLDREEKPV YILRAQAINR KTGRPVEPES EFIIKIHDIN DNEPIFTKEV ENSP00000265071/1-790 KRLDREEKPV YILRAQAINR RTGRPVEPES EFIIKIHDIN DNEPIFTKEV ENSTTRP00000003961/1-784 KRLDREEKPV YILRAQAINR KTGRPVEPES EFIIKIHDIN DNEPIFTKEV BACU015048/1-274 KRLDREEKPV YILRAQAINR KTGRPVEPES EFIIKIHDIN DNEPIFTKEV ENSBTAP00000017274/1-790 KRLDREEKPV YILRAQAINR KTGRPVEPES EFIIKIHDIN DNEPIFTKEV 251 300 bmy_13904T0/1-853 YTATVPEMSD VGTFVVQVSA TDADDPTYGN SAKIVYSILQ GQPYFSVESE ENSP00000265071/1-790 YTATVPEMSD VGTFVVQVTA TDADDPTYGN SAKVVYSILQ GQPYFSVESE ENSTTRP00000003961/1-784 YTATVPEMSD VGTFVVQVTA TDADDPTYGN SAKIVYSILQ GQPYFSVESE BACU015048/1-274 YTATVPEMSD VGTFVAQVSA TDADDPTYGN SAKIVYSILQ GQPYFSVESE ENSBTAP00000017274/1-790 YTATVPEMSD VGTFVVQVTA TDADDPTYGN SAKVVYSILQ GQPYFSVESE 301 350 bmy_13904T0/1-853 TGIIKTALLN MDRENREQYQ VVIQAKDMGG QMGGLSGTTT VNITLTDVND ENSP00000265071/1-790 TGIIKTALLN MDRENREQYQ VVIQAKDMGG QMGGLSGTTT VNITLTDVND ENSTTRP00000003961/1-784 TGIIKTALLN MDRENREQYQ VVIQAKDMGG QMGGLSGTTT VNITLTDVND BACU015048/1-274 TGIIKTALLN MDRENREQYQ VVIQAKDMGG QMGGLSGTTT VNITLTDVND ENSBTAP00000017274/1-790 TGIIKTALLN MDRENREQYQ VVIQAKDMGG QMGGLSGTTT VNITLTDVND 351 400 bmy_13904T0/1-853 NPPRFPQSTY QFKTPESSPP GTPIGRIKAS DADLGENADI EYSITEGEGL ENSP00000265071/1-790 NPPRFPQSTY QFKTPESSPP GTPIGRIKAS DADVGENAEI EYSITDGEGL ENSTTRP00000003961/1-784 NPPRFPQSTY QFKTPESSPP GTPIGRIKAS DADLGENAEI EYSITEGEGL BACU015048/1-274 NPPRFPQS-- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 NPPRFPQSTY QFKTPESSPP GTPIGRIKAS DADVGENAEI EYSITEGEGL 401 450 bmy_13904T0/1-853 DMFDVITDQE TQEGIITVKK LLDFEKKKVY TLKVEASNPH IEPRFLYLGP ENSP00000265071/1-790 DMFDVITDQE TQEGIITVKK LLDFEKKKVY TLKVEASNPY VEPRFLYLGP ENSTTRP00000003961/1-784 DMFDVITDQE TQEGIITVKK LLDFEKKKVY SLKVEASNPH IEPRFLYLGP BACU015048/1-274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 DMFDVITDQE TQEGIITVKK LLDFEKKKVY TLKVEASNPH VEPRFLYLGP 451 500 bmy_13904T0/1-853 FKDSATVKIM VEDVDEPPVF SKLAYILQIR EDAQINTTIG SVTAQDPDAA ENSP00000265071/1-790 FKDSATVRIV VEDVDEPPVF SKLAYILQIR EDAQINTTIG SVTAQDPDAA ENSTTRP00000003961/1-784 FKDSATVKIM VEDVDEPPVF SKLAYILQIR EDAQINTTIG SVTAQDPDAA BACU015048/1-274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 FKDSATVRIM VEDVDEPPVF SKLAYILQIR EDAQINTTIG SVTAQDPDAA 501 550 bmy_13904T0/1-853 RNPVKYSVDR HTDMDRIFNI DSGNGSIFTS KLLDRETLLW HNITVIATEI ENSP00000265071/1-790 RNPVKYSVDR HTDMDRIFNI DSGNGSIFTS KLLDRETLLW HNITVIATEI ENSTTRP00000003961/1-784 RNPVKYSVDR HTDMDRIFNI DSGNGSIFTS KLLDRETLLW HNITVIATEI BACU015048/1-274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 RNPVKYSVDR HTDMDRIFNI DSGNGSIFTS KLLDRETLLW HNITVIATEI 551 600 bmy_13904T0/1-853 NNPKQSSRVP LYIKVLD--- ---------- ---------- -LIQTIRAVD ENSP00000265071/1-790 NNPKQSSRVP LYIKVLDVND NAPEFAEFYE TFVCEKAKAD QLIQTLHAVD ENSTTRP00000003961/1-784 NNPKQSSRVP LYIKVLDVND NPPEFAEFYE TFVCEKAKAD QLIQTLRAVD BACU015048/1-274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 NNPKQSSRVP LYIKVLDVND NPPEFAEFYE TFVCEKAKAD QLIQTLRAID 601 650 bmy_13904T0/1-853 KDDPYSGHQF SFSLAPEAAS GSNFTIQDNK DNTAGILTRK NGYNRHEMST ENSP00000265071/1-790 KDDPYSGHQF SFSLAPEAAS GSNFTIQDNK DNTAGILTRK NGYNRHEMST ENSTTRP00000003961/1-784 KDDPYSGHQF SFSLAPEAAS GSNFTIQDNK DNTAGILTRK NGYNRHEMST BACU015048/1-274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 KDDPYSGHQF SFSLAPEAAS GSNFTIQDNK DNTAGIFTRK NGYNRHEMST 651 700 bmy_13904T0/1-853 YLLPVVISDN DYPVQSSTGT VTVRVCACDH QGNMQSCHAE ALVHPTGLST ENSP00000265071/1-790 YLLPVVISDN DYPVQSSTGT VTVRVCACDH HGNMQSCHAE ALIHPTGLST ENSTTRP00000003961/1-784 YLLPVVISDN DYPVQSSTGT VTVRVCACDH QGNMQSCHAE ALVHPTGLST BACU015048/1-274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 YLLPVVISDN DYPVQSSTGT VTVRVCACDH QGNMQSCHAE ALVHPTGLST 701 750 bmy_13904T0/1-853 GALVAILLCI VTLLVTVVLF AALRRQRKKE PLIISKEDIR DNIVSYNDEG ENSP00000265071/1-790 GALVAILLCI VILLVTVVLF AALRRQRKKE PLIISKEDIR DNIVSYNDEG ENSTTRP00000003961/1-784 GALVAILLCI VTLLVTVVLF AALRRQRKKE PLIISKEDIR DNIVSYNDEG BACU015048/1-274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 GALIAILLCI VTLLVTVVLF AALRRQRKKE PLIISKEDIR DNIVSYNDEG 751 800 bmy_13904T0/1-853 GGEEDTQAFD IGTLRNPEAI EDSKLRRDIV PEALFLPRRT PAACDNTDVR ENSP00000265071/1-790 GGEEDTQAFD IGTLRNPEAI EDNKLRRDIV PEALFLPRRT PTARDNTDVR ENSTTRP00000003961/1-784 GGEEDTQAFD IGTLRNPEAI EDSKLRRDIV PEALFLPRRT PAACDNTDVR BACU015048/1-274 ---------- ---------- ------RNI- ---------- ---------- ENSBTAP00000017274/1-790 GGEEDTQAFD IGTLRNPEAI EDSKLRRDIV PEALFLPRRT PAARDNTDVR 801 850 bmy_13904T0/1-853 DFINQRLKEN DTDPTAPPYD SLATFAYEGT GSVADSLSSL ESVTTDGDQD ENSP00000265071/1-790 DFINQRLKEN DTDPTAPPYD SLATYAYEGT GSVADSLSSL ESVTTDADQD ENSTTRP00000003961/1-784 DFINQRLKEN DTDPTAPPYD SLATFAYEGT GSVADSLSSL ESVTTDGDQD BACU015048/1-274 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000017274/1-790 DFINQRLKEN DTDPTAPPYD SLATYAYEGA GSVADSLSSL ESVTTDGDQD 851 900 bmy_13904T0/1-853 YDYLSDWGPR FKKLADMYGG VGSDKDS ENSP00000265071/1-790 YDYLSDWGPR FKKLADMYGG VDSDKDS ENSTTRP00000003961/1-784 YEYLSDWGPR FKKLADMYGG VDSDKDS BACU015048/1-274 ---------- ---------- ------- ENSBTAP00000017274/1-790 YDYLSDWGPR FKKLADMYGG VDSDKDS