Part of scaffold_952 (Scaffold)

For more information consult the page for scaffold_952 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP44 ENSTTRG00000004399 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 44

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004140, Bottlenosed dolphin)

Protein Percentage 98.73%
cDNA percentage 99.2%
Ka/Ks Ratio 0.50062 (Ka = 0.006, Ks = 0.0119)

BT.36835 ENSBTAG00000019946 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase 44

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026571, Cow)

Protein Percentage 94.63%
cDNA percentage 94.82%
Ka/Ks Ratio 0.17253 (Ka = 0.0255, Ks = 0.1479)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2133 bp    Location:368405..355372   Strand:-
>bmy_13861
ATGCTAACAATGGATAAGTGCAAACACATTGGGCAGTTGCGGCTTGCTCAAGACCATTCCATCCTCAACCCTCAGAAATGGCATTGTGTGGACTGCAATACAACTGAGTCTATTTGGGCTTGCCTTAGCTGTTCCCATGTGGCCTGTGGAAGATATATTGAAGAACATGCACTCAAGCACTTTCAAGAAAGCAGTCATCCTGTTGCATTGGAGGTGAACGAGATGTATGTTTTTTGTTACCTTTGTGATGATTATGTTCTTAATGATAATGCAATTGGAGACCTGAAGTTACTACGAAGTACATTAAGTGCAATCAAAAGTCAAAATTATCACTGCACCACTCGTAGTGGAAGGGTTTTACGGTCTATGGGTACAAGTGATGATTCTTATTTCTTACATGATGGCACCCAATCTCTGCTTCAAAATGAAGATCAAATGTATACTGCTCTTTGGCACAGGAGAAGGATACTAATGGGTAAAATCTTTCGAACTTGGTTTGAACAGTTACCCACTGGAAGAAAAAGGCAAGAACAATTTCAGGAAAAAATAGCAAAAAGAGAAGTGAAGAAAAGACGGCAAGAACTAGAGTATCAAGTTAAAGCAGAATTGGAAAGTATGCCTCCAAGAAAGAGTTTACGTTTGCAAGGTCTAGCTGAGTCCACCACAGTAGAAATAGCTCCTGTTCAAGTACCACTGCAAGCCTCAGCATCACCAGCAAAAGATAAAGTAGTATCTACCTCAGAAGATGTAAGACTAAAAGAAGCCAGTGACTCCTCTGTTAAACGAAGGCCAATAGTAACTCCTGGTGTAACAGGATTGAGAAATTTGGGAAATACTTGCTATATGAATTCTGTTCTTCAAGTGTTAAGTCATTTACTTATTTTTCGACAATGTTTTTTAAAACTTGATCTGAACCAATGGCTAGCTGTGACAGCTAGTGATAAAACAAGATCATCTTATAAGCATCCTCCAATCACAGATACAGTATATCAAATGAATGAATGCCAAGAAAAAGAAACATGCTCTGTTCGCTCCAGACATCCAAGTTTATCATCAGGACTAAGCGGTGGAGCATCAAAGAGTAGAAAGATGGAACTTATTCAGCCAAGGGAGCCAAGTTCACAATACATTTCTCTCTGTCATGAATTGCATACTTTGTTCCAAGTCATGTGGTCTGGAAAGTGGGCCTTGGTCTCACCATTTGCTATGCTACACTCAGTATGGAGACTAATTCCTGCTTTTCGTGGTTATGCCCAACAAGATGCTCAGGAATTTCTTTGTGAGCTTTTGGATAAAATACAACATGAACTAGAGACAACTGGTACCAGGTTACCAGCTCTTATCCCCACTTCTCAAAGGAAACTTATCAAGCAGGTTCTGAATGTTGTAAATAACATCTTTCATGGACAACTTCTTAGTCAGGTTACATGTCTTGCATGTGACAACAAATCAAACACCATAGAACCTTTCTGGGACTTGTCACTGGAATTTCCAGAAAGATACCAATGCAGTGGAAAAGATATTGCTTCCCAGCCATGTCTGGTTACTGAAATGTTGGCCAAATTCACAGAAACYGAAGCTTTAGAAGGAAAAATCTACGTATGTGACCAGTGTAATTCAAAGCGTAGAAGGTTTTCCTCAAAACCAGTTGTACTCACAGAAGCCCAGAAACAGCTTATGATTTGCCACCTACCTCAGGTTCTCAGACTACATCTCAAACGATTCAGGTGGTCAGGACGTAATAACCGAGAGAAGATTGGTGTTCATGTTGGCTTTGAAGAAATCTTAAACATGGAGCCCTATTGCTGCAGGGAATCCCTGAAATCCCTCAGACCAGAATGTTTTATCTATGATTTATCTGCTGTAGTAATGCACCACGGGAAAGGATTTGGCTCAGGACACTACACTGCCTACTGTTATAATTCCGAAGGAGGGTTCTGGGTACACTGCAATGATTCCAAGCTAAGCATGTGCACTATGGATGAAGTATGCAAGGCCCAAGCTTATATCTTGTTTTATACCCAGCGAGTTACTGAGAATGGACATTCTAAACTCTTGCCTCCAGAACTCCTGTCTGGTAGCCAGCATCCCAGTGAAGAAGCTGATGCCTCTTGTAATGAAATCCTTAGCTGA

Related Sequences

bmy_13861T0 Protein

Length: 711 aa      View alignments
>bmy_13861T0
MLTMDKCKHIGQLRLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSHPVALEVNEMYVFCYLCDDYVLNDNAIGDLKLLRSTLSAIKSQNYHCTTRSGRVLRSMGTSDDSYFLHDGTQSLLQNEDQMYTALWHRRRILMGKIFRTWFEQLPTGRKRQEQFQEKIAKREVKKRRQELEYQVKAELESMPPRKSLRLQGLAESTTVEIAPVQVPLQASASPAKDKVVSTSEDVRLKEASDSSVKRRPIVTPGVTGLRNLGNTCYMNSVLQVLSHLLIFRQCFLKLDLNQWLAVTASDKTRSSYKHPPITDTVYQMNECQEKETCSVRSRHPSLSSGLSGGASKSRKMELIQPREPSSQYISLCHELHTLFQVMWSGKWALVSPFAMLHSVWRLIPAFRGYAQQDAQEFLCELLDKIQHELETTGTRLPALIPTSQRKLIKQVLNVVNNIFHGQLLSQVTCLACDNKSNTIEPFWDLSLEFPERYQCSGKDIASQPCLVTEMLAKFTETEALEGKIYVCDQCNSKRRRFSSKPVVLTEAQKQLMICHLPQVLRLHLKRFRWSGRNNREKIGVHVGFEEILNMEPYCCRESLKSLRPECFIYDLSAVVMHHGKGFGSGHYTAYCYNSEGGFWVHCNDSKLSMCTMDEVCKAQAYILFYTQRVTENGHSKLLPPELLSGSQHPSEEADASCNEILS*