Sequence details bmy_07660 (Coding sequence)

Part of scaffold_321 (Scaffold)

For more information consult the page for scaffold_321 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS16 ENSTTRG00000003465 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 16 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003250, Bottlenosed dolphin)

Protein Percentage 93.94%
cDNA percentage 94.1%
Ka/Ks Ratio 0.28865 (Ka = 0.0192, Ks = 0.0667)

VPS16 ENSBTAG00000001320 (Cow)

Gene Details

vacuolar protein sorting-associated protein 16 homolog

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001744, Cow)

Protein Percentage 96.9%
cDNA percentage 93.17%
Ka/Ks Ratio 0.07804 (Ka = 0.0198, Ks = 0.2534)

Additional orthologs identified in other species via the OPTIC pipeline.

VPS16 (Human)   Vps16 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2793 bp    Location:364292..372204   Strand:+
Raw sequence 
>bmy_07660
ATGGAGGCATTAGGGGCTCCTCTGGGGCTCAGCCCATCTGGATGCAGGGTCATGACGAGTCTAATCTCTGTTTGTCACTGTGTGGGCAGGAAATATGAGCTGTATAGCATGGACTGGGACCTGAAGGAGGAACTGAGGGACTGCCTGGTGGCCGCCGCGCCCTATGGGGGCCCCATTGCGCTGCTGAGGAACCCCGGGCGGAAGGAGAAGCCTGCCTGCGCACGGCCGGTTCTCGAGATCTACTCGGCTTCTGGTGTGCCTCTGGCCAGTCTGCTGTGGAAGAGTGGGCCCATGGTGTCCCTGGGCTGGTCAGCTGAGGAGGAGCTGCTCTGTGTGCAGGAAGACGGGGTCGTGCTGGTTTATGGGCTTCATGGTGACTTCCGGAGACACTTCAGCATGGGCAACGAGGTGCTCCAGAACCGGGTTCTAGATGCCCGGATCTTCCATACTGAGTTTGGTTCTGGGGTGGCCATCCTCACAGGGGCCCACCGCTTCACCCTCAGTGCCAATGTGGGCGACCTCAAACTCCGCCGGATGCCAGAGGTGCCAGGTCTGCAGAGTGCACCCTCATGCTGGACCACAGTGTGCCAGGACCGAGTGGCACACATTCTTCTGGCTGTAGGACCTGATCTTTACCTCCTGGATCACGCAGCCTGCTCTTCAGTGATACCCCCTGGCCTAGCCCCAGGAGTGAGCAGCTTCCTGCAGATGGCTGTCTCCTTCACCTACAGACACCTGGCGCTCTTCACAGACACAGGGTACATCTGGATGGGGACAGCGTCTCTCAAGGAGAAGCTGTGTGAGTTCAACTGCAACATCCGGGCTCCCCCGAAGCAGATGGTCTGGTGCAGCCGTCCTCGCAGCAAGGAGAGGGCCATTGTGGTAGCCTGGGAGAGGCGGCTAATGGTGGTGGGTGACGCACCTGAGGGCATCCAGTATCCTTGGAGGGCTGCTGGGGGTGAGGAGGGGGAAGGAGGGTCGCCTGCCCTGCCCCATCTCTGGGTGCTCTTAGGAACCTTGACCAAGCTCAGGTTCGTGCTGGATGAGGACTCCTACCTGGTGCCTGAGCTGGATGGGGTCCGCATCTTCTCCCGCAGTACCCATGAGTTCTTGCACGAGGTTCCAGTGGCCAGCGAGGAGATCTTTAAAATTGCCTCAATGGCCCCTGGAGCACTACTGTTGGAGGCCCAGAAGGAATATGAGAAAGAGAGCCAGAAGGCGGATGAGTACCTGCGGGAGATCCAGGAGCTGGGGCAGCTGCCCCAGGCCGTGCAGCAGTGCATCGAGGCAGCGGGACATGAGCACTGGCCAGACATGCAGAAGAGTCTGCTCAGGGCGGCCTCCTTTGGAAAGTGTTTCCTGGACAGATTTCCACCCGACAGCTTTGTGCGCATGTGTCAGGACCTTCGTGTACTCAATGCCATTCGGGACTATCACATCGGGATTCCCCTCACCTATAGCCAGTATCCCCAAGACTTATCTCCCAGCTGGATCCTTAACCAAATAAAATACAGATACAAGCAGCTCACCATCCAGGTGCTGCTGGACAGGCTTGTGTTGCGGAGGCTTTACCCCCTGGCCATTCAGATATGTGAGTACCTGCGGCTTCCTGAAGTGCAGGGCGTCAGCAGAATCCTGGCCCACTGGGCCTGCTACAAGGTACAACAGAAGGACGTGTCTGACGAGGATGTTGCTCGAGCCATTAACCAGAAGCTGGGGGACACACCTGGTGTCTCTTACTCTGACATTGCTGCACGAGCCTATGGCTGTGGCCGCACGGAGCTGGCCATCAAGCTGCTGGAATATGAGCCACGCTCTGGGGAACAGGTTCCCCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTAAGCAAGGCCATCGAGAGTGGGGATACTGACCTGGGTGAGCAGGGTTTGGGTGAGGACAAGGCTGGGGACCCTGGGCTGAGCAAGGGGCTGGGCTGGACCTGCATCCCACCTTATTGTCCCATAGTGTTCACGGTGCTGCTGCACCTGAAGAATGAGCTGAACCGAGGAGACTTTTTCATGACGCTTCGGAACCAGCCCATGGCCTTAAGTTTGTACCGACAGTTCTGTAAGCATCAAGAGCTAGAGACGCTGAAGGACCTTTACAATCAGGATGACAACCACCAGGAGCTGGGCAGCTTCCACATCCGAGCCAGCTACGCTGCAGAGGAGCGTATTGAGGGGCGAGTTGCAGCTCTGCAGACGGCAGCCGACGCATTCTCCAAGGCCAAGAATGAGTTTGCAGCCAAGGCCACAGAGGATCAAATGCGGCTCCTACGGCTGCAGCGACGCCTAGAAGATGAGCTGGGGGGCCGGTTCTTAGACCTGTCTCTACACGACACGGTCACCACCCTCATCCTCAGTGGCCAAAACAAGCGCGCAGAGCAGCTGGCACGTGACTTCCGCATCCCTGACAAGAGGCTCTGGTGGCTGAAGCTGACCGCCCTGGCAGATCTGGAAGACTGGGAGGAGCTAGAGAAGTTTTCTAAGAGCAAGAAATCACCCATCGGCTACCTGCCCTTTGTGGAAATCTGCATGAAGCAACACAACAAATATGAAGCCAAAAAGTATGCTTCCCGCGTGGGTCCCGAGCAGAAGGTCAAGGCCTTGCTTCTCGTTGGGGACGTGGCTCAGGCTGCAGACGTTGCCATCGAGCACCGGAATGAGGCAGAGATGAGCCTCGTATTTTCCCACTGCACCGGAGCCACAGATGGGCCCACGGCTGACAAGATTCAGCGGGCCCGGGCTCAAGCCCAGAAGAAGTGA

Related Sequences

bmy_07660T0 Protein

Length: 931 aa      View alignments
>bmy_07660T0
MEALGAPLGLSPSGCRVMTSLISVCHCVGRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPGRKEKPACARPVLEIYSASGVPLASLLWKSGPMVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFSMGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCWTTVCQDRVAHILLAVGPDLYLLDHAACSSVIPPGLAPGVSSFLQMAVSFTYRHLALFTDTGYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAIVVAWERRLMVVGDAPEGIQYPWRAAGGEEGEGGSPALPHLWVLLGTLTKLRFVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKESQKADEYLREIQELGQLPQAVQQCIEAAGHEHWPDMQKSLLRAASFGKCFLDRFPPDSFVRMCQDLRVLNAIRDYHIGIPLTYSQYPQDLSPSWILNQIKYRYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQGVSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLEYEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLGEQGLGEDKAGDPGLSKGLGWTCIPPYCPIVFTVLLHLKNELNRGDFFMTLRNQPMALSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFSKAKNEFAAKATEDQMRLLRLQRRLEDELGGRFLDLSLHDTVTTLILSGQNKRAEQLARDFRIPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVGPEQKVKALLLVGDVAQAADVAIEHRNEAEMSLVFSHCTGATDGPTADKIQRARAQAQKK*