Part of scaffold_127 (Scaffold)

For more information consult the page for scaffold_127 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CELF1 ENSTTRG00000014157 (Bottlenosed dolphin)

Gene Details

CUGBP, Elav-like family member 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013426, Bottlenosed dolphin)

Protein Percentage 99.04%
cDNA percentage 98.88%
Ka/Ks Ratio 0.36637 (Ka = 0.0081, Ks = 0.0221)

CUGBP1 ENSBTAG00000002520 (Cow)

Gene Details

CUGBP Elav-like family member 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003274, Cow)

Protein Percentage 98.07%
cDNA percentage 93.9%
Ka/Ks Ratio 0.05746 (Ka = 0.0128, Ks = 0.2224)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2223 bp    Location:1703884..1639595   Strand:-
>bmy_04133
ATGCTCTTCATGTGGATTGCCAATTACCGGGGGATGTCCACTGACATGCTCAAATCTCTGGAAAAATTCAAACGTATCAGTGTGCTTAAAATACAGCACCTTGAAGAGTACAGTGGTAGAGTACAACAGCTGGCATACAGGGGCACGTTCGCATCTTTGAAAGTTCGCAACTTGAAGGTTCGGATAAGATTGTTTCCTGAAGTCCAATTCGTGCATCTGAATTGTTTTGCTATGAAGAGTGTCCTTTCCCATAGAACCTTTAAGCTCATTGTTCCCTGTGGAATGCTCAGAAAATATGGCAGCAAATATGAAGAGGAATGTGCCCAGCTGATCTTTGTCATGAAGCTTTTCATGTCCATTCGTTCTAATACTCTTGCAGACTTCTTTACTGAACTAATTTGGGTTATAGATTGTGATGCTTTAAAAAGCTGCCTAATTATGAGTAGGTTCATTTACACAGAAGTGAGTTTTGGATTCAAAACCAACATTATTTTGGTCCATTTCTTGGATGTCATTGTTGCTCAATATGCCAGTCATTTAATGTCCCTTCATTTTAGAGAAAGCATTTTGCTGGGGTGCAACCTAGGAGAGGATGCCAAACTGAGTGAAGACAATAGTCCAGAGAGGGAGGTGGAAAGCTACAGTTCCCTGTATTGTGAACTGAGCTTGAGTGAAGTGAAGTCTTTGAGAAAGGTCAAACTACTGAAAAAACAGTGTTCCTTAGTAGTTTCAGGCTTTGGGGGTCCTCAAAAACTGATTCTCAGGGAGGAGTTTGGAAGATGTGAAACAAGCTTGTGTTTCTTCTGCTCTGAAGCTAAAGCTGTGTGTATTTGTGGATCAGACAAGTGCAGCAAGTTAATAACATTGGCTTCTGAAGGGGAGAGTGAGGTGATGGCTGCGTTTAAGTTGGATTTCCTTCCAGAAATGATGGTGGATCATTGCTCTTTGAATTCCAGTCCCGTCTCAAAGAAAATGAACGGCACCCTGGACCACCCAGACCAACCGGATCTTGATGCTATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCAGAGAAGGATTTGAGGGAACTGTTTGAACAGTATGGTGCTGTCTACGAAATCAACGTCCTAAGGGATAGGAGCCAAAACCCTCCTCAGAGCAAAGGGTGCTGTTTTGTTACATTTTACACCCGAAAAGCTGCATTAGAAGCTCAGAATGCTCTTCACAACATGAAGGTCCTCCCAGGGATGCATCATCCTATACAGATGAAACCTGCCGACAGTGAGAAGAACAATGCAGTGGAAGACAGGAAGCTGTTTATTGGTATGATTTCCAAGAAGTGCACTGAAAATGACATCCGAGTCATGTTCTCTTCATTCGGACAGATCGAAGAATGCCGGATATTGAGGGGACCTGATGGCCTGAGCCGAGTCCTTGGAGAGGGCTGCTCTTCCCCCATGGTGGTAAAATTTGCTGATACACAGAAGGACAAAGAGCAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGAAACCTTGCTGGTCTAAATACTCTTGGACCCCAGTATTTAGCACTTTATTTGCAGCTCCTTCAGCAGACTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTTAAATGCAATGCAGTTACAGAATTTGGCTGCACTAGCTGCTGCAGCTAGTGCAGCTCAGAACACACCAAGTGGTACCAATGCTCTCACTACATCCAGCAGTCCCCTCAGCGTACTCACCAGTTCAGCAGGGTCCTCACCCAGCTCCAGCAGCAGCAGCTCTGTCAATCCCATCGCCTCCCTTGGAGCCCTACAGACACTAGCTGGAGCAACAGCAGGCCTCAACGTCAGCTCTTTGGCAGGGATGGCTGCTTTAAATGGTGGGCTGGGCAGCAGTGGCCTTTCTAATGGCACTGGGAGCACCATGGAGGCCCTCACGCAGGCCTACTCGGGGATCCAGCAATATGCTGCAGCGGCGCTCCCCACTCTGTACAACCAGAACTTGTTGACACAGCAGAGTATTGGTGCTGCTGGAAGCCAGAAGGAAGGTTTTGTAAGTTACGACAATCCTGTTTCGGCTCAAGCTGCCATCCAGTCCATGAACGGCTTTCAGATTGGCATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAAGAATGACAGCAAGCCCTACTGA

Related Sequences

bmy_04133T0 Protein

Length: 741 aa      View alignments
>bmy_04133T0
MLFMWIANYRGMSTDMLKSLEKFKRISVLKIQHLEEYSGRVQQLAYRGTFASLKVRNLKVRIRLFPEVQFVHLNCFAMKSVLSHRTFKLIVPCGMLRKYGSKYEEECAQLIFVMKLFMSIRSNTLADFFTELIWVIDCDALKSCLIMSRFIYTEVSFGFKTNIILVHFLDVIVAQYASHLMSLHFRESILLGCNLGEDAKLSEDNSPEREVESYSSLYCELSLSEVKSLRKVKLLKKQCSLVVSGFGGPQKLILREEFGRCETSLCFFCSEAKAVCICGSDKCSKLITLASEGESEVMAAFKLDFLPEMMVDHCSLNSSPVSKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQMKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRVLGEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASVWGNLAGLNTLGPQYLALYLQLLQQTASSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSAGSSPSSSSSSSVNPIASLGALQTLAGATAGLNVSSLAGMAALNGGLGSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAGSQKEGFVSYDNPVSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY*