Sequence detailsbmy_03464 (Coding sequence)

Part of scaffold_99 (SequenceType object (1))

For more information consult the page for scaffold_99 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMARCA5ENSTTRG00000002915 (Bottlenosed dolphin)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000002735, Bottlenosed dolphin)

Protein Percentage 88.43%
cDNA percentage 88.02%
Ka/Ks Ratio 0.06955 (Ka = 0.0036, Ks = 0.0512)

BT.103096ENSBTAG00000003399 (Cow)

Gene Details

SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004408, Cow)

Protein Percentage 98.76%
cDNA percentage 95.57%
Ka/Ks Ratio 0.0306 (Ka = 0.0056, Ks = 0.1831)

SMARCA5 (Minke Whale)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5

External Links

Gene match (Identifier: BACU013548, Minke Whale)

Protein Percentage 99.9%
cDNA percentage 99.43%
Ka/Ks Ratio 0.02676 (Ka = 0.0005, Ks = 0.0179)

Additional orthologs identified in other species via the OPTIC pipeline.

SMARCA5 (Human)   Smarca5 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3141 bp    Location:362072..406811   Strand:+
Raw sequence 
>bmy_03464
ATGTCGTCCGCGGCCGACCCTCCGCCACCCCCGCCTCCCGAGAGCGCGCCTTCCAAGCCCGCAACCTCGGCCGCCGGCAGCGGGAACAACAACAGCAACAAAGGCGGCCCCGAGGGCGTCGCAGCCCAGGCGGCTGCCTCTGCGGCCAGCGCCGCCGCCGCGGACTCCGAGATGGAGGAAGTATTTGATGATGCGTCTCCTGGAAAGCAAAAAGAAATCCAAGAACCAGATCCTACCTATGAAGAAAAAATGCAAACTGACCGGGCAAATAGATTTGAGTATTTATTAAAGCAGACAGAGCTGTTTGCACATTTCATTCAGCCTGCTGCTCAGAAGACTCCAACCTCACCTTTGAAGATGAAACCAGGGCGCCCACGAATAAAAAAGGATGAGAAACAGAACTTGCTGTCAGTTGGCGACTATCGGCACCGAAGAACAGAGCAAGAGGAGGATGAAGAGTTATTAACAGAAAGCTCCAAAGCAACCAATGTTTGCACTCGATTTGAAGACTCTCCATCATATGTAAAATGGGGTAAACTGAGAGATTATCAGGTCCGAGGATTAAATTGGCTCATTTCTTTGTATGAGAACGGCATCAATGGTATCCTAGCAGATGAAATGGGCCTGGGAAAGACTCTTCAAACAATTTCTCTTCTTGGGTACATGAAACACTATAGAAACATTCCTGGTCCTCATATGGTTTTGGTTCCTAAGTCTACATTACACAACTGGATGAGTGAATTCAAGAGATGGGTACCAACACTTAGATCTGTTTGTTTAATAGGAGATAAAGAACAAAGAGCTGCTTTTGTCAGAGACGTTTTATTACCAGGAGAATGGGATGTATGTGTAACATCTTATGAAATGCTTATTAAAGAGAAGTCTGTTTTCAAAAAATTTAATTGGAGGTACTTAGTTATAGATGAAGCTCACAGGATCAAAAATGAAAAATCTAAGTTGTCAGAGATAGTGAGGGAATTCAAGACTACAAATCGACTATTATTAACTGGAACACCTCTTCAAAACAACTTGCATGAGCTTTGGTCACTTCTTAATTTTTTGTTGCCAGATGTCTTTAATTCAGCTGATGACTTTGATTCCTGGTTTGATACAAACAATTGCCTTGGGGATCAAAAGCTAGTTGAGAGGCTTCATATGGTTTTGCGTCCATTCCTCCTTCGTCGAATTAAGGCTGATGTTGAAAAGAGTTTGCCTCCAAAGAAGGAAGTAAAAATCTACGTGGGTCTCAGCAAAATGCAAAGGGAATGGTATACTCGGATATTAATGAAGGATATAGATATACTAAACTCTGCAGGGAAGATGGACAAAATGAGGCTACTGAACATCCTGATGCAGTTGAGGAAATGCTGTAATCACCCATATCTCTTTGATGGAGCTGAACCTGGTCCACCTTATACAACGGACATGCATCTGGTTACCAACAGTGGCAAAATGGTGGTGTTAGACAAACTGCTCCCTAAATTAAAAGAACAAGGTTCACGAGTACTAATCTTCAGTCAGATGACGAGGGTACTGGATATTTTGGAAGATTATTGCATGTGGAGAAATTATGAGTACTGTAGATTGGATGGGCAGACACCCCATGATGAGAGACAAGAGTCCATCAATGCATACAATGAACCAAACAGCACAAAGTTTGTTTTCATGTTAAGCACACGTGCTGGTGGTCTTGGCATCAATCTTGCTACCGCTGATGTAGTAATTTTGTATGACTCAGATTGGAATCCCCAAGATCGAGCCCATAGAATTGGACAAACCAAGACAGTCAGAGTGTTCCGCTTCATAACGGATAACACTGTAGAAGAAAGAATAGTGGAGCGTGCTGAGATGAAACTCAGACTGGATTCAATAGTTATCCAGCAAGGAAGACTTGTGGATCAGAATCTGAACAAAATTGGGAAAGATGAAATGCTTCAAATGATAAGGCATGGGGCAACACATGTATTTGCTTCAAAGGAAAGCGAGATTACTGATGAGGATATTGATGGTATTTTGGAAAGAGGTGCAAAGAAGACTGCAGAGATGAATGAAAAGCTCTCCAAGATGGGTGAAAGCTCACTTAGAAACTTCACAATGGATACAGAGTCGAGTGTTTATAACTTTGAAGGAGAAGATTATAGAGAAAAACAAAAGATTGCATTCACAGAGTGGATTGAACCACCTAAACGAGAAAGAAAAGCCAACTATGCTGTTGATGCTTATTTCAGGGAAGCTCTTCGTGTCAGTGAACCTAAAGCACCCAAGGCTCCTCGACCTCCAAAACAACCTAATGTTCAGGATTTCCAGTTCTTTCCTCCACGTCTATTTGAATTATTGGAAAAAGAAATTCTATATTACAGAAAAACGATTGGGTACAAGGTGCCTCGAAATCCTGACCTACCAAATGCAGCACAGGCACAAAAAGAAGAACAGCTTAAAATTGATGAAGCTGAACCCCTTAATGATGAAGAGTTAGAGGAAAAAGAGAAGCTTCTAACACAGGGATTTACCAATTGGAATAAGAGAGATTTTAACCAGTTTATCAAAGCCAATGAGAAGTGGGGTCGTGATGATATTGAAAATATAGCAAGAGAAGTAGAAGGAAAAACTCCAGAAGAAGTCATTGAATACTCAGCTGTGTTCTGGGAAAGATGCAATGAGCTGCAGGACATAGAGAAGATTATGGCTCAGATTGAAAGGGGAGAGGCAAGAATTCAAAGAAGAATTAGTATCAAAAAAGCACTTGACACGAAGATTGGACGGTACAAAGCACCTTTTCATCAGCTGAGAATATCTTATGGTACTAACAAAGGAAAAAACTACACTGAAGAAGAGGATCGTTTTCTGATCTGTATGCTTCACAAGCTTGGATTTGACAAAGAAAATGTTTATGATGAATTGCGACAGTGTATTCGCAACTCTCCTCAGTTCAGATTTGACTGGTTTCTAAAGTCCAGAACTGCAATGGAGCTCCAGAGGAGGTGTAACACTTTAATTACCTTGATTGAAAGAGAAAACATGGAACTAGAAGAAAAGGAGAAGGCAGAGAAAAAGAAAAGAGGACCAAAACCTTCAACCCAGAAACGTAAAATGGATGGAGCACCTGATGGCCGAGGAAGAAAAAAGAAACTGAAACTATGA

Related Sequences

bmy_03464T0 SequenceType object (3)

Length: 1047 aa      View alignments
>bmy_03464T0
MSSAADPPPPPPPESAPSKPATSAAGSGNNNSNKGGPEGVAAQAAASAASAAAADSEMEEVFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQDRAHRIGQTKTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGATHVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRKTIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL*