KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:23:56 2014 Check: 00 .. Name: ENSTTRP00000002735/1-983 Len: 1052 Check: 1660 Weight: 1.00 Name: ENSP00000283131/1-1052 Len: 1052 Check: 1572 Weight: 1.00 Name: ENSBTAP00000004408/1-1052 Len: 1052 Check: 5331 Weight: 1.00 Name: bmy_03464T0/1-1046 Len: 1052 Check: 4908 Weight: 1.00 Name: BACU013548/1-1008 Len: 1052 Check: 1881 Weight: 1.00 // 1 50 ENSTTRP00000002735/1-983 ---------- ---------- ---------- ---------- ---------- ENSP00000283131/1-1052 MSSAAEPPPP PPPESAPSKP AASIASGGSN SSNKGGPEGV AAQAVASAAS ENSBTAP00000004408/1-1052 MSSAADPPPP PPPESAPSKP AALAAGSGSN SSNKGGPEGV AAQGAPSVGN bmy_03464T0/1-1046 MSSAADPPPP PPPESAPSKP ATSAAGSGNN NSNKGGPEGV AAQAAASAAS BACU013548/1-1008 MSSAADPPPP PPPESAPSKP ATSAAGSGNN NSNKGGPEGV AAQAAASAAS 51 100 ENSTTRP00000002735/1-983 ---------E VFDDASPGKQ KEIQEPDPTY EEKMQTDRAN RFEYLLKQTE ENSP00000283131/1-1052 AGPADAEMEE IFDDASPGKQ KEIQEPDPTY EEKMQTDRAN RFEYLLKQTE ENSBTAP00000004408/1-1052 AGPTDSEMEE VFDNASPGKQ KEIQEPDPTY EEKMQTDRAN RFEYLLKQTE bmy_03464T0/1-1046 AAAADSEMEE VFDDASPGKQ KEIQEPDPTY EEKMQTDRAN RFEYLLKQTE BACU013548/1-1008 AAAVDSEMEE VFDDASPGKQ KEIQEPDPTY EEKMQTDRAN RFEYLLKQTE 101 150 ENSTTRP00000002735/1-983 LFAHFIQPAA QKTPTSPLKM KPGRPRIKKD EKQNLLSVGD YRHRRTEQEE ENSP00000283131/1-1052 LFAHFIQPAA QKTPTSPLKM KPGRPRIKKD EKQNLLSVGD YRHRRTEQEE ENSBTAP00000004408/1-1052 LFAHFIQPAA QKTPTSPLKM KPGRPRIKKD EKQNLLSVGD YRHRRTEQEE bmy_03464T0/1-1046 LFAHFIQPAA QKTPTSPLKM KPGRPRIKKD EKQNLLSVGD YRHRRTEQEE BACU013548/1-1008 LFAHFIQPAA QKTPTSPLKM KPGRPRIKKD EKQNLLSVGD YRHRRTEQEE 151 200 ENSTTRP00000002735/1-983 DEELLTESSK ATNVCTR-ED SPXXVKWGKL RDYQVRGLNW LISLYENGIN ENSP00000283131/1-1052 DEELLTESSK ATNVCTRFED SPSYVKWGKL RDYQVRGLNW LISLYENGIN ENSBTAP00000004408/1-1052 DEELLTESSK ATNVCTRFED SPSYVKWGKL RDYQVRGLNW LISLYENGIN bmy_03464T0/1-1046 DEELLTESSK ATNVCTRFED SPSYVKWGKL RDYQVRGLNW LISLYENGIN BACU013548/1-1008 DEELLTESSK ATNVCTRFED SPSYVKWGKL RDYQVRGLNW LISLYENGIN 201 250 ENSTTRP00000002735/1-983 GILADEMXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000283131/1-1052 GILADEMGLG KTLQTISLLG YMKHYRNIPG PHMVLVPKST LHNWMSEFKR ENSBTAP00000004408/1-1052 GILADEMGLG KTLQTISLLG YMKHYRNIPG PHMVLVPKST LHNWMSEFKR bmy_03464T0/1-1046 GILADEMGLG KTLQTISLLG YMKHYRNIPG PHMVLVPKST LHNWMSEFKR BACU013548/1-1008 GILADEMGLG KTLQTISLLG YMKHYRNIPG PHMVLVPKST LHNWMSEFKR 251 300 ENSTTRP00000002735/1-983 XXXXXXXXXX XXXXXXXAAF VRDVLLPGEW DVCVTSYEML IKEKSVFKKF ENSP00000283131/1-1052 WVPTLRSVCL IGDKEQRAAF VRDVLLPGEW DVCVTSYEML IKEKSVFKKF ENSBTAP00000004408/1-1052 WVPTLRSVCL IGDKEQRAAF VRDVLLPGEW DVCVTSYEML IKEKSVFKKF bmy_03464T0/1-1046 WVPTLRSVCL IGDKEQRAAF VRDVLLPGEW DVCVTSYEML IKEKSVFKKF BACU013548/1-1008 WVPTLRSVCL IGDKEQRAAF VRDVLLPGEW DVCVTSYEML IKEKSVFKKF 301 350 ENSTTRP00000002735/1-983 NWRYLVIDEA HRIKNEKSKL SEIVREFKTT NRLLLTGTPL QNNLHELWSL ENSP00000283131/1-1052 NWRYLVIDEA HRIKNEKSKL SEIVREFKTT NRLLLTGTPL QNNLHELWSL ENSBTAP00000004408/1-1052 NWRYLVIDEA HRIKNEKSKL SEIVREFKTT NRLLLTGTPL QNNLHELWSL bmy_03464T0/1-1046 NWRYLVIDEA HRIKNEKSKL SEIVREFKTT NRLLLTGTPL QNNLHELWSL BACU013548/1-1008 NWRYLVIDEA HRIKNEKSK- ---------- ---------- ---------- 351 400 ENSTTRP00000002735/1-983 LNFLLPDVFN SADDFDSWFD TNNCLGDQKL VERLHMVLRP FLLRRIKADV ENSP00000283131/1-1052 LNFLLPDVFN SADDFDSWFD TNNCLGDQKL VERLHMVLRP FLLRRIKADV ENSBTAP00000004408/1-1052 LNFLLPDVFN SADDFDSWFD TNNCLGDQKL VERLHMVLRP FLLRRIKADV bmy_03464T0/1-1046 LNFLLPDVFN SADDFDSWFD TNNCLGDQKL VERLHMVLRP FLLRRIKADV BACU013548/1-1008 ---------- ---DFDSWFD TNNCLGDQKL VERLHMVLRP FLLRRIKADV 401 450 ENSTTRP00000002735/1-983 EKSLPPKKEV KIYVGLSKMQ REWYTRILMK DIDILNSAGK MDKMRLLNIL ENSP00000283131/1-1052 EKSLPPKKEV KIYVGLSKMQ REWYTRILMK DIDILNSAGK MDKMRLLNIL ENSBTAP00000004408/1-1052 EKSLPPKKEV KIYVGLSKMQ REWYTRILMK DIDILNSAGK MDKMRLLNIL bmy_03464T0/1-1046 EKSLPPKKEV KIYVGLSKMQ REWYTRILMK DIDILNSAGK MDKMRLLNIL BACU013548/1-1008 EKSLPPKKEV KIYVGLSKMQ REWYTRILMK DIDILNSAGK MDKMRLLNIL 451 500 ENSTTRP00000002735/1-983 MQLRKCCNHP YLFDGAEPGP PYTTDMHLVT NSGKMVVLDK LLPKLKEQGS ENSP00000283131/1-1052 MQLRKCCNHP YLFDGAEPGP PYTTDMHLVT NSGKMVVLDK LLPKLKEQGS ENSBTAP00000004408/1-1052 MQLRKCCNHP YLFDGAEPGP PYTTDMHLVT NSGKMVVLDK LLPKLKEQGS bmy_03464T0/1-1046 MQLRKCCNHP YLFDGAEPGP PYTTDMHLVT NSGKMVVLDK LLPKLKEQGS BACU013548/1-1008 MQLRKCCNHP YLFDGAEPGP PYTTDMHLVT NSGKMVVLDK LLPKLKEQGS 501 550 ENSTTRP00000002735/1-983 RVLIFSQMTR VLDILEDYCM WRNYDYCRLD GQTPHDERQE SINAYNEPNS ENSP00000283131/1-1052 RVLIFSQMTR VLDILEDYCM WRNYEYCRLD GQTPHDERQD SINAYNEPNS ENSBTAP00000004408/1-1052 RVLIFSQMTR VLDILEDYCM WRNYEYCRLD GQTPHDERQE SINAYNEPNS bmy_03464T0/1-1046 RVLIFSQMTR VLDILEDYCM WRNYEYCRLD GQTPHDERQE SINAYNEPNS BACU013548/1-1008 RVLIFSQMTR VLDILEDYCM WRNYEYCRLD GQTPHDERQE SINAYNEPNS 551 600 ENSTTRP00000002735/1-983 TKFVFMLSTR AGGLGINLAT ADVVILYDSD WNPQVDLQAM DRAHRIGQTK ENSP00000283131/1-1052 TKFVFMLSTR AGGLGINLAT ADVVILYDSD WNPQVDLQAM DRAHRIGQTK ENSBTAP00000004408/1-1052 TKFVFMLSTR AGGLGINLAT ADVVILYDSD WNPQVDLQAM DRAHRIGQTK bmy_03464T0/1-1046 TKFVFMLSTR AGGLGINLAT ADVVILYDSD WNPQ------ DRAHRIGQTK BACU013548/1-1008 TKFVFMLSTR AGGLGINLAT ADVVILYDSD WNPQVDLQAM DRAHRIGQTK 601 650 ENSTTRP00000002735/1-983 TVRVFRFITD NTVEERIVER AEMKLRLDSI VIQQGRLVDQ NLNKIGKDEM ENSP00000283131/1-1052 TVRVFRFITD NTVEERIVER AEMKLRLDSI VIQQGRLVDQ NLNKIGKDEM ENSBTAP00000004408/1-1052 TVRVFRFITD NTVEERIVER AEMKLRLDSI VIQQGRLVDQ NLNKIGKDEM bmy_03464T0/1-1046 TVRVFRFITD NTVEERIVER AEMKLRLDSI VIQQGRLVDQ NLNKIGKDEM BACU013548/1-1008 TVRVFRFITD NTVEERIVER AEMKLRLDSI VIQQGRLVDQ NLNKIGKDEM 651 700 ENSTTRP00000002735/1-983 LQMIRHGATH VFASKESEIT DEDIDGILER GAKKTAEMNE KLSKMGESSL ENSP00000283131/1-1052 LQMIRHGATH VFASKESEIT DEDIDGILER GAKKTAEMNE KLSKMGESSL ENSBTAP00000004408/1-1052 LQMIRHGATH VFASKESEIT DEDIDGILER GAKKTAEMNE KLSKMGESSL bmy_03464T0/1-1046 LQMIRHGATH VFASKESEIT DEDIDGILER GAKKTAEMNE KLSKMGESSL BACU013548/1-1008 LQMIRHGATH VFASKESEIT DEDIDGILER GAKKTAEMNE KLSKMGESSL 701 750 ENSTTRP00000002735/1-983 RNFTMDTESS VYNFEGEDYR EKQKIAFTEW IEPPKRERKA NYAVDAYFRE ENSP00000283131/1-1052 RNFTMDTESS VYNFEGEDYR EKQKIAFTEW IEPPKRERKA NYAVDAYFRE ENSBTAP00000004408/1-1052 RNFTMDTESS VYNFEGEDYR EKQKIAFTEW IEPPKRERKA NYAVDAYFRE bmy_03464T0/1-1046 RNFTMDTESS VYNFEGEDYR EKQKIAFTEW IEPPKRERKA NYAVDAYFRE BACU013548/1-1008 RNFTMDTESS VYNFEGEDYR EKQKIAFTEW IEPPKRERKA NYAVDAYFRE 751 800 ENSTTRP00000002735/1-983 ALRVSEPKAP KAPRPPKQPN VQDFQFFPPR LFELLEKEIL YYRKTIGYKV ENSP00000283131/1-1052 ALRVSEPKAP KAPRPPKQPN VQDFQFFPPR LFELLEKEIL FYRKTIGYKV ENSBTAP00000004408/1-1052 ALRVSEPKAP KAPRPPKQPN VQDFQFFPPR LFELLEKEIL YYRKTIGYKV bmy_03464T0/1-1046 ALRVSEPKAP KAPRPPKQPN VQDFQFFPPR LFELLEKEIL YYRKTIGYKV BACU013548/1-1008 ALRVSEPKAP KAPRPPKQPN VQDFQFFPPR LFELLEKEIL YYRKTIGYKV 801 850 ENSTTRP00000002735/1-983 PRNPDLPNAA QAQKEEQLKI DASL----DE LEN-EKLLTX XXXXXXXXXX ENSP00000283131/1-1052 PRNPELPNAA QAQKEEQLKI DEAESLNDEE LEEKEKLLTQ GFTNWNKRDF ENSBTAP00000004408/1-1052 PRNPDLPNAA QAQKEEQLKI DEAEPLNDEE LEEKEKLLTQ GFTNWNKRDF bmy_03464T0/1-1046 PRNPDLPNAA QAQKEEQLKI DEAEPLNDEE LEEKEKLLTQ GFTNWNKRDF BACU013548/1-1008 PRNPDLPNAA QAQKEEQLKI DEAEPLNDEE LEEKEKLLTQ GFTNWNKRDF 851 900 ENSTTRP00000002735/1-983 XXXXXXXX-X XXXXXXXXXX XXXXXXXXXX XXXXXVFWER CNELQDIEKI ENSP00000283131/1-1052 NQFIKANEKW GRDDIENIAR EVEGKTPEEV IEYSAVFWER CNELQDIEKI ENSBTAP00000004408/1-1052 NQFIKANEKW GRDDIENIAR EVEGKTPEEV IEYSAVFWER CNELQDIEKI bmy_03464T0/1-1046 NQFIKANEKW GRDDIENIAR EVEGKTPEEV IEYSAVFWER CNELQDIEKI BACU013548/1-1008 NQFIKANEKW GRDDIENIAR EVEGKTPEEV IEYSAVFWER CNELQDIEKI 901 950 ENSTTRP00000002735/1-983 MAQIERGEAR IQRRISIKKA LDTKIGRYKA PFHQLRISYG TNKGKNYTEE ENSP00000283131/1-1052 MAQIERGEAR IQRRISIKKA LDTKIGRYKA PFHQLRISYG TNKGKNYTEE ENSBTAP00000004408/1-1052 MAQIERGEAR IQRRISIKKA LDTKIGRYKA PFHQLRISYG TNKGKNYTEE bmy_03464T0/1-1046 MAQIERGEAR IQRRISIKKA LDTKIGRYKA PFHQLRISYG TNKGKNYTEE BACU013548/1-1008 MAQIERGEAR IQRRISIKKA LDTKIGRYKA PFHQLRISYG TNKGKNYTEE 951 1000 ENSTTRP00000002735/1-983 EDRFLICMLH KLGFDKENVY DELRQCIRNS PQFRFDWFLK SRTAMELQRR ENSP00000283131/1-1052 EDRFLICMLH KLGFDKENVY DELRQCIRNS PQFRFDWFLK SRTAMELQRR ENSBTAP00000004408/1-1052 EDRFLICMLH KLGFDKENVY DELRQCIRNS PQFRFDWFLK SRTAMELQRR bmy_03464T0/1-1046 EDRFLICMLH KLGFDKENVY DELRQCIRNS PQFRFDWFLK SRTAMELQRR BACU013548/1-1008 EDRFLICMLH KLGFDKENVY DELRQCIRNS PQFRFDWFLK SRTAMELQRR 1001 1050 ENSTTRP00000002735/1-983 CNTLITLIER ENMELEEKEK AEKKKRGPKP STQKRKMDGA PDGRGRKKK- ENSP00000283131/1-1052 CNTLITLIER ENMELEEKEK AEKKKRGPKP STQKRKMDGA PDGRGRKKKL ENSBTAP00000004408/1-1052 CNTLITLIER ENMELEEKEK AEKKKRGPKP STQKRKMDGA PDGRGRKKKL bmy_03464T0/1-1046 CNTLITLIER ENMELEEKEK AEKKKRGPKP STQKRKMDGA PDGRGRKKKL BACU013548/1-1008 CNTLITLIER ENMELEEKEK AEKKKRGPKP STQKRKMDGA PDGRGRKKKL 1051 1100 ENSTTRP00000002735/1-983 -- ENSP00000283131/1-1052 KL ENSBTAP00000004408/1-1052 KL bmy_03464T0/1-1046 KL BACU013548/1-1008 KL