Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NTRK1 ENSTTRG00000014516 (Bottlenosed dolphin)

Gene Details

neurotrophic tyrosine kinase, receptor, type 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013763, Bottlenosed dolphin)

Protein Percentage 97.13%
cDNA percentage 97.27%
Ka/Ks Ratio 0.23349 (Ka = 0.0175, Ks = 0.0748)

BT.22873 ENSBTAG00000003060 (Cow)

Gene Details

Tyrosine-protein kinase receptor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000003980, Cow)

Protein Percentage 95.12%
cDNA percentage 93.4%
Ka/Ks Ratio 0.09091 (Ka = 0.0249, Ks = 0.2742)

NTRK1  (Minke Whale)

Gene Details

neurotrophic tyrosine kinase, receptor, type 1

External Links

Gene match (Identifier: BACU003921, Minke Whale)

Protein Percentage 96.83%
cDNA percentage 97.08%
Ka/Ks Ratio 0.22354 (Ka = 0.0184, Ks = 0.0823)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2133 bp    Location:1655314..1670732   Strand:+
>bmy_03433
ATGCATGCATGGGACGATATGGCTGTCTACATCGAGAACCAGCAGCATCTGTGGCAGCTGAAGCTCAGTGACCTGAGGGGCCTGGGGGAGCTGAGAAACCTCACCATCGTGAAGAGTGGTCTCCGTTTCGTGGCGCCAGATGCCTTCCATTTCACTCCTCGTCTCCGTCGCCTGGATCTGTCCTTCAATGCTCTGGAGTCTCTCTCCTGGAAAACCGTCCAGGGCCTCTCCCTACAGGAACTAGTCCTGTCGGGGAACCCCCTGCACTGTACCTGTGCCCTGCTCTGGCTGCAGCGCTGGGAGGAGGAGGGGCTGGGCGGAGTGCGGGAACAGAAGCTGCAGTGTCCCGGGCAGGGGCCCCTTGCCCTCATGTCCAACACCAGCTGCGGTGTGCCCACGCTGAAGGTCCAGATGCCCAATGCCTCCGTGGACGTGGGGGACGACGTGTTGCTGCAGTGCCAGGTGGAGGGGCAGGGCCTGGAGCAGGCCGGCTGGATCCTCACGGAGCTGGAGGAGTCAGCCACAGTGATGCAATCTGGGAGTCTGCCGTCCTTGGGACTGACCCTGGCCAATGTCACCAGTGACCTCAATAGGAAGAACGTGACGTGCTGGGCGGAGAATGACGTGGGCCGGGCTGAAGTCTCCGTCCAGGTCAACGTCTCCTTCCCCGCCAGTGTGCATCTGCAGCCAGCAGTGGAGCAGCACCACTGGTGCATCCCCTTCTCCGTGGATGGGCAGCCCACGCCCTCTCTGCGTTGGCTCTTCAATGGCTCTGTGCTCAACGAGACCAGCTTCATCTTCACCGAGTTCCTGGAGCTGGCAGCCAATGAGACCGTGCGACACGGCTGCCTGCGCCTCAACCAGCCCACCCACGTCAACAATGGCAACTACACGCTGCTGGCTACCAACCCCTTGGGCCAGGCCGCCGCCTCCGTCATGGCCGCCTTCATGGACAACCCTTTCGAGTTCAACCCTGAGGACCCCATCCCCGACACCAACAGCACATCCGGAGACCCAGTGGAGAAGGATGAAACACCTTTTGGGGTCTCCATGGCCGTGGGCCTGGCTGTTTTTGCCTGCCTCTTCCTTTCTACGACGTTTCTTGTGCTCAACAAATGTGGACGGAGGAACAAGTTTGGGATCAACCGCCCCACCGTGCTGGCTCCAGAGGATGGACTGGCCATGTCCCTGCATTTCATGACATTGGGTGGCAGCTCCTTGTCTCCCAGCGAGGGCAAAAGCTCTGGGCTCCAAGGCCACATCATTGAGAACCCACAGTACTTCAGTGATGCCTGTGTTCATCACATCAAGCGCCGAGATATCGTGCTCAAGTGGGAGCTGGGCGAGGGCGCCTTTGGGAAGGTCTTCCTAGCTGAGTGCCACAACCTGCTGCCTGAGCAGGACAAGATGCTAGTGGCCGTCAAGGCGCTGAAGGAGGTGTCTGAGAGTGCCCGGCAGGACTTCCAGCGGGAGGCCGAGCTGCTCACCATGCTGCAGCACCAGCACATCGTGCGCTTCTTTGGCGTCTGCACCGAGGGCCGCCCGCTGCTCATGGTCTTTGAGTACATGCGGCATGGTGACCTCAACCGCTTCCTCCGGTATGAGGGCCTGGCCCTGGCGCTGGCCCCTGGCCCGTCGTCCCACGGGCCTGATGCCAAGCTGTTGGCTGGCGGGGAGGACGTGGCTCCAGGGCCTCTGGGCCTGGGGCAGCTGCTGGCCGTGGCTAGTCAGGTCGCCGCGGGGATGGTGTACCTGGCGGGTCTGCACTTCGTGCATCGGGACCTGGCCACGCGCAACTGTCTGGTGGGTCAGGGACTAGTGGTCAAGATCGGCGATTTCGGCATGAGCAGGGATATCTACAGCACCGACTATTACCGCGTGGGAGGCCGCACCATGCTGCCCATCCGCTGGATGCCGCCTGAGAGCATCCTCTACCGCAAGTTCACCACCGAGAGCGACGTGTGGAGCTTCGGCGTGGTGCTCTGGGAGATCTTCACCTACGGCAAGCAACCCTGGTACCAGCTCTCCAACACAGAGCGGGAGCCCCAACAACGCCACAGCATCAAGGATGTGCATACCCGGCTGCAAGCCCTTGCCCAGGCCCCTCCTGTCTACCTGGATGTCCTGGGCTAG

Related Sequences

bmy_03433T0 Protein

Length: 711 aa      View alignments
>bmy_03433T0
MHAWDDMAVYIENQQHLWQLKLSDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLRRLDLSFNALESLSWKTVQGLSLQELVLSGNPLHCTCALLWLQRWEEEGLGGVREQKLQCPGQGPLALMSNTSCGVPTLKVQMPNASVDVGDDVLLQCQVEGQGLEQAGWILTELEESATVMQSGSLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVHLQPAVEQHHWCIPFSVDGQPTPSLRWLFNGSVLNETSFIFTEFLELAANETVRHGCLRLNQPTHVNNGNYTLLATNPLGQAAASVMAAFMDNPFEFNPEDPIPDTNSTSGDPVEKDETPFGVSMAVGLAVFACLFLSTTFLVLNKCGRRNKFGINRPTVLAPEDGLAMSLHFMTLGGSSLSPSEGKSSGLQGHIIENPQYFSDACVHHIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEVSESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRYEGLALALAPGPSSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEREPQQRHSIKDVHTRLQALAQAPPVYLDVLG*