Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HAPLN2 ENSTTRG00000014505 (Bottlenosed dolphin)

Gene Details

hyaluronan and proteoglycan link protein 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000013752, Bottlenosed dolphin)

Protein Percentage 80.88%
cDNA percentage 80.98%
Ka/Ks Ratio 0.08281 (Ka = 0.0045, Ks = 0.0545)

HAPLN2 ENSBTAG00000015784 (Cow)

Gene Details

hyaluronan and proteoglycan link protein 2 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000020956, Cow)

Protein Percentage 96.76%
cDNA percentage 95.29%
Ka/Ks Ratio 0.06978 (Ka = 0.0149, Ks = 0.2136)

HAPLN2  (Minke Whale)

Gene Details

hyaluronan and proteoglycan link protein 2

External Links

Gene match (Identifier: BACU003933, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.44%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0318)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1023 bp    Location:1453200..1455162   Strand:+
>bmy_03423
ATGCAAGGCAGGATCAGTCTCCCCACTCTCTGCCACTTSCTTCTCCCTTGGGCCTTCACCACCTTCCACAGAGCCCTGGGGGACTCAGCACCCCATCCTGGCCCCCACTACCTCCTGCCCCCCATCCACGAGGTCGTTCACTCTCGTCGTGGGGCCACGACCACGCTGCCCTGCGTCCTGGGCGCCCCGCCTCCCAGCTACAAGGTGCGCTGGAGCAAAGTGGAGCCAGGGGAACTCCAGGAAACGCCCATCCTCATCACCAACGGACTGCACGCCCGGGGCTACGGGCCCCTGGGGGGTCGTGCCAGGATGCGAAGGGGGCATCGGCTAGACGCCTCCCTGGTCATCGCGGGCGTGCGCCTGGAGGACGAGGGCCGGTACCGCTGTGAGCTCATCAATGGCATCGAGGACGAGAGCGTGGCGCTGACCCTTCGCCTGGAGGGTGTGGTGTTTCCGTACCAGCCCAGCCGGGGCAGGTACCAGTTCAATTACTACGAGGCGAAGCAGGCGTGCGAGGAGCAAGACGGACGCCTGGCCACCTACGCCCAGCTGTACCAGGCGTGGACCGAGGGTCTGGACTGGTGTAACGCGGGCTGGCTGCTCGAGGGTTCCGTGCGCTACCCTGTGCTCACGGCGCGCGCTCCGTGCGGTGGCCCAGGGCGGCCCGGGATCCGCAGCTACGGGCCCCGCGACCGGAAGCGTGACCGCTACGACGCCTTCTGCTTCACCTCTGAGCTGTCAGGCCAAGTGTTCTTCGTGCCGGGGCGGCTGACGCTGTCTGAAGCCCACGCGGCGTGCCGGCGGCGCGGGGCCATGGTAGCCAAGGTCGGGCACCTCTATGCAGCCTGGAAGTTCTCCGGGCTGGACCAATGCGACGGCGGCTGGCTGGCGGATGGCAGCGTGCGCTTCCCCATCACCACGCCTCGGCCGCGCTGCGGGGGCCTCCCGGATCCCGGAGTGCGCAGCTTCGGCTTCCCCAGACCCCAGCAGGCGGCCTACGGGACCTACTGCTACTCCGAATAG

Related Sequences

bmy_03423T0 Protein

Length: 341 aa      View alignments
>bmy_03423T0
MQGRISLPTLCHXLLPWAFTTFHRALGDSAPHPGPHYLLPPIHEVVHSRRGATTTLPCVLGAPPPSYKVRWSKVEPGELQETPILITNGLHARGYGPLGGRARMRRGHRLDASLVIAGVRLEDEGRYRCELINGIEDESVALTLRLEGVVFPYQPSRGRYQFNYYEAKQACEEQDGRLATYAQLYQAWTEGLDWCNAGWLLEGSVRYPVLTARAPCGGPGRPGIRSYGPRDRKRDRYDAFCFTSELSGQVFFVPGRLTLSEAHAACRRRGAMVAKVGHLYAAWKFSGLDQCDGGWLADGSVRFPITTPRPRCGGLPDPGVRSFGFPRPQQAAYGTYCYSE*