KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:13:07 2014 Check: 00 .. Name: ENSTTRP00000013752/1-340 Len: 341 Check: 9636 Weight: 1.00 Name: ENSP00000255039/1-340 Len: 341 Check: 8099 Weight: 1.00 Name: ENSBTAP00000020956/1-340 Len: 341 Check: 449 Weight: 1.00 Name: bmy_03423T0/1-340 Len: 341 Check: 918 Weight: 1.00 Name: BACU003933/1-237 Len: 341 Check: 9969 Weight: 1.00 // 1 50 ENSTTRP00000013752/1-340 MQGRISLPTL CHFLLPWAFT TFHRALGDSA PHPGPHYLLP PIHEVIHSRR ENSP00000255039/1-340 MPGWLTLPTL CRFLL-WAFT IFHKAQGDPA SHPGPHYLLP PIHEVIHSHR ENSBTAP00000020956/1-340 MQGRISLPTL CHFLLPWAFT TFHRALGSQA PHPGPHYLLP PIHEVIHSRR bmy_03423T0/1-340 MQGRISLPTL CHXLLPWAFT TFHRALGDSA PHPGPHYLLP PIHEVVHSRR BACU003933/1-237 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000013752/1-340 GATTTLPCVL GAPPPSYKVR WSKVEPGELQ ETPILITNGL HARGYGPLGG ENSP00000255039/1-340 GATATLPCVL GTTPPSYKVR WSKVEPGELR ETLILITNGL HARGYGPLGG ENSBTAP00000020956/1-340 GATTTLPCVL GAPPPSYKVR WSKVEPGELR ETPILITNGL HARGYGPLGG bmy_03423T0/1-340 GATTTLPCVL GAPPPSYKVR WSKVEPGELQ ETPILITNGL HARGYGPLGG BACU003933/1-237 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000013752/1-340 RARMRRGHRL DASLVIAGVR LEDEGRYRCE LINGIEDESV ALTLRLEGVV ENSP00000255039/1-340 RARMRRGHRL DASLVIAGVR LEDEGRYRCE LINGIEDESV ALTLSLEGVV ENSBTAP00000020956/1-340 RARMRRGHRL DASLVIAGVR LEDEGRYRCE LINGIEDESV AMTLRLEGVV bmy_03423T0/1-340 RARMRRGHRL DASLVIAGVR LEDEGRYRCE LINGIEDESV ALTLRLEGVV BACU003933/1-237 ---MRRGHRL DASLVIAGVR LEDEGRYRCE LINGIEDESV ALTLRLEGVV 151 200 ENSTTRP00000013752/1-340 FPYQPSRGRY QFNYYEAKQA CEEQDGRLAT YAQLYQAXXX XXXXXXXXXX ENSP00000255039/1-340 FPYQPSRGRY QFNYYEAKQA CEEQDGRLAT YSQLYQAWTE GLDWCNAGWL ENSBTAP00000020956/1-340 FPYQPSRGRY QFNYYEAKQA CEEQDGRLAT YAQLYQAWTE GLDWCNAGWL bmy_03423T0/1-340 FPYQPSRGRY QFNYYEAKQA CEEQDGRLAT YAQLYQAWTE GLDWCNAGWL BACU003933/1-237 FPYQPSRGRY QFNYYEAKQA CEEQDGRLAT YAQLYQAWTE GLDWCNAGWL 201 250 ENSTTRP00000013752/1-340 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXQV ENSP00000255039/1-340 LEGSVRYPVL TARAPCGGRG RPGIRSYGPR DRMRDRYDAF CFTSALAGQV ENSBTAP00000020956/1-340 LEGSVRYPVL TARAPCGGRG RPGIRSYGPR DRKRDRYDAF CFTSALSGHV bmy_03423T0/1-340 LEGSVRYPVL TARAPCGGPG RPGIRSYGPR DRKRDRYDAF CFTSELSGQV BACU003933/1-237 LEGSVRYPVL TARAPCGGPG RPGIRSYGPR DRKRDRYDAF CFTSELSGQV 251 300 ENSTTRP00000013752/1-340 FFVPGGLTLS EAHAACRRRG AVVAKVGHLY AAWKFSGLDQ CDGGWLADGS ENSP00000255039/1-340 FFVPGRLTLS EAHAACRRRG AVVAKVGHLY AAWKFSGLDQ CDGGWLADGS ENSBTAP00000020956/1-340 FFVPGRLSLS EAHAACRRRG AMVAKVGHLY AAWKFSGLDQ CDGGWLADGS bmy_03423T0/1-340 FFVPGRLTLS EAHAACRRRG AMVAKVGHLY AAWKFSGLDQ CDGGWLADGS BACU003933/1-237 FFVPGRLTLS EAHAACRRRG AMVAKVGHLY AAWKFSGLDQ CDGGWLADGS 301 350 ENSTTRP00000013752/1-340 VRFPITTPRP RCGGLPDPGV RSFGFPRPQQ AAYGTYCYSE - ENSP00000255039/1-340 VRFPITTPRP RCGGLPDPGV RSFGFPRPQQ AAYGTYCYAE N ENSBTAP00000020956/1-340 VRFPITTPRP RCGGLPDPGV RSFGFPRPQQ ADYGTYCYSE - bmy_03423T0/1-340 VRFPITTPRP RCGGLPDPGV RSFGFPRPQQ AAYGTYCYSE - BACU003933/1-237 VRFPITTPRP RCGGLPDPGV RSFGFPRPQQ AAYGTYCYSE -