Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LMNA ENSTTRG00000001395 (Bottlenosed dolphin)

Gene Details

lamin A/C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001313, Bottlenosed dolphin)

Protein Percentage 98.59%
cDNA percentage 98.45%
Ka/Ks Ratio 0.10318 (Ka = 0.0059, Ks = 0.057)

LMNA ENSBTAG00000017574 (Cow)

Gene Details

prelamin-A/C

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023373, Cow)

Protein Percentage 97.37%
cDNA percentage 95.14%
Ka/Ks Ratio 0.05035 (Ka = 0.0133, Ks = 0.2647)

LMNA  (Minke Whale)

Gene Details

lamin A/C

External Links

Gene match (Identifier: BACU003946, Minke Whale)

Protein Percentage 99.39%
cDNA percentage 99.53%
Ka/Ks Ratio 0.22907 (Ka = 0.0025, Ks = 0.011)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1500 bp    Location:1043076..1050129   Strand:+
>bmy_03405
ATGGCTGCCCAGGCCCGGCTCAAGGACCTGGAGGCTCTGCTCAACTCCAAGGAGGCYGCACTGAGCACTGCTCTCAGTGAGAAACGCACGCTGGAGGGCGAGCTGCATGACCTGCGGGGGCAAGTGGCCAAGGAGCTTCGTGAGACCAAGCGCCGCCATGAGACGCGCCTGGTGGAGATTGATAATGGGAAGCAGCGTGAGTTTGAGAGCCGGCTGGCGGATGCCCTGCAGGAGCTGCGGGCCCAGCACGAGGACCAGGTGGAACAGTACAAGAAGGAACTGGAGAAGACCTATTCTGCCAAGCTGGATAATGCCAGGCAGTCAGCCGAGAGGAACAGCAACCTGGTGGGGGCCGCCCACGAGGAGCTGCAGCAGTCCCGCGTCCGCATCGACAGCCTCTCCGCCCAGCTCAGCCAGCTCCAGAAGCAGCTGGCGGCCAAGGAAGCAAAGCTGCGGGACCTGGAGGACTCGCTGGCCCGTGAGCGGGACACCAGCCGGCGGCTGCTGGCGGACAAGGAGCGGGAGATGGCGGAAATGCGGGCAAGGATGCAACAGCAGCTGGACGAGTACCAGGAGCTGCTGGACATCAAGCTGGCTCTGGACATGGAGATCCACGCCTACCGCAAGCTCCTGGAGGGCGAGGAGGAGAGGCTACGCCTGTCCCCCAGCCCCACCTCGCAGCGCAGCCGCGGCCGGGCCTCCTCCCACTCGTCCCAGACACAGAGTGGGGGCAGCATCGCCAAAAAGCGCAAGCTGGAGTCCACGGAGAGCCGCAGCAGCTTCTCCCAGCACGCTCGCACCAGCGGGCGCGTGGCCGTGGAGGAGGTGGATGAGGAGGGCAAGTTCGTACGCCTGCGCAACAAGTCCAATGAGGTAGTCCCCCAGGACCAGTCCATGGGCAACTGGCAGATCAAGCGCCAGAATGGAGATGATCCCCTGCTGACCTACCGCTTCCCGCCAAAGTTCACTCTGAAGGCTGGTCAGGTGGTGACGATCTGGGCTGCAGGAGCTGGGGCCACCCATAGCCCCCCTACCGACTTGGTGTGGAAGGCACAGAACACCTGGGGCTGCGGAAACAGCCTGCGCACGGCTCTCATCAACTCCACTGGGGAAGAGGTGGCCATGCGCAAGCTGGTGCGCTCAGTGACTATGGTTGACGATGACGAGGATGAGGATGGAGATGACCTGCTCCATCATCACCATGGCTCCCACGGCAGCAGCTCGGGGGACCCCGCCGAGTACAACCTGCGCTCGCGCACCGTGCTGTGCGGGACGTGCGGGCAGCCTGCAGACAAGGCGTCTGCCAGCAGCTCGGGAGCCCAGGTGGGCGGATCCATCTCCTCTGGCTCCTCCGCCTCCAGTGTCACAGTCACTCGCAGCTACCGCAGTGTGGGGGGCAGTGGGGGTGGCAGCTTCGGGGACAGCCTGGTCACCCGCTCCTACCTCCTGGGCAACTCCAGACCCCGAACCCAGAACCCCCAGAACTGCAGCATCATGTAA

Related Sequences

bmy_03405T0 Protein

Length: 500 aa      View alignments
>bmy_03405T0
MAAQARLKDLEALLNSKEAALSTALSEKRTLEGELHDLRGQVAKELRETKRRHETRLVEIDNGKQREFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVGAAHEELQQSRVRIDSLSAQLSQLQKQLAAKEAKLRDLEDSLARERDTSRRLLADKEREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPSPTSQRSRGRASSHSSQTQSGGSIAKKRKLESTESRSSFSQHARTSGRVAVEEVDEEGKFVRLRNKSNEVVPQDQSMGNWQIKRQNGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHSPPTDLVWKAQNTWGCGNSLRTALINSTGEEVAMRKLVRSVTMVDDDEDEDGDDLLHHHHGSHGSSSGDPAEYNLRSRTVLCGTCGQPADKASASSSGAQVGGSISSGSSASSVTVTRSYRSVGGSGGGSFGDSLVTRSYLLGNSRPRTQNPQNCSIM*