KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:20:30 2014 Check: 00 .. Name: ENSP00000357283/1-664 Len: 669 Check: 9955 Weight: 1.00 Name: ENSBTAP00000023373/1-664 Len: 669 Check: 9193 Weight: 1.00 Name: ENSTTRP00000001313/1-664 Len: 669 Check: 9861 Weight: 1.00 Name: bmy_03405T0/1-499 Len: 669 Check: 2664 Weight: 1.00 Name: BACU003946/1-664 Len: 669 Check: 9278 Weight: 1.00 // 1 50 ENSP00000357283/1-664 METPSQRRAT RSGAQASSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR ENSBTAP00000023373/1-664 METPSQRRAT RSGAQASSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR ENSTTRP00000001313/1-664 METPSQRRAT RGGAQGSSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR bmy_03405T0/1-499 ---------- ---------- ---------- ---------- ---------- BACU003946/1-664 METPSQRRAT RSGAQAGSTP LSPTRITRLQ EKEDLQELND RLAVYIDRVR 51 100 ENSP00000357283/1-664 SLETENAGLR LRITESEEVV SREVSGIKAA YEAELGDARK TLDSVAKERA ENSBTAP00000023373/1-664 SLETENAGLR LRITESEEVV SREVSGIKAA YEAELGDARK TLDSVAKERA ENSTTRP00000001313/1-664 SLETENAGLR LRITESEEVV SREVSGIKAA YEAELGDARK TLDSVAKERA bmy_03405T0/1-499 ---------- ---------- ---------- ---------- ---------- BACU003946/1-664 SLETENAGLR LRITESEEVV SREVSGIKAA YEAELGDARK TLDSVAKERA 101 150 ENSP00000357283/1-664 RLQLELSKVR EEFKELKARN TKKEGDLIAA QARLKDLEAL LNSKEAALST ENSBTAP00000023373/1-664 RLQLELSKVR EEFKELKARN SKKEGDLMAA QARLKDLEAL LNSKEAALST ENSTTRP00000001313/1-664 RLQLELSKVR EEFKDLKARN TKKEGDLMAA QARLKDLEAL LNSKEAALST bmy_03405T0/1-499 ---------- ---------- -------MAA QARLKDLEAL LNSKEAALST BACU003946/1-664 RLQLELSKVR EEFKELKARN TKKEGDLMAA QARLKDLEAL LNSKEAALST 151 200 ENSP00000357283/1-664 ALSEKRTLEG ELHDLRGQVA KLEAALGEAK KQLQDEMLRR VDAENRLQTM ENSBTAP00000023373/1-664 ALSEKRTLEG ELHDLRGQVA KLEAALGEAK KQLQDEMLRR VDAENRLQTL ENSTTRP00000001313/1-664 ALSEKRTLEG ELHDLRGQVA KLEAALSEAK KQLQDEMLRR VDAENRLQTL bmy_03405T0/1-499 ALSEKRTLEG ELHDLRGQVA K--------- ---------- ---------- BACU003946/1-664 ALSEKRTLEG ELHDLRGQVA KLEAALGEAK KQLQDEMLRR VDAENRLQTL 201 250 ENSP00000357283/1-664 KEELDFQKNI YSEELRETKR RHETRLVEID NGKQREFESR LADALQELRA ENSBTAP00000023373/1-664 KEELDFQKNI YSEELRETKR RHETRLVEID NGKQREFESR LADALQELRA ENSTTRP00000001313/1-664 KEELDFQKNI YSEELRETKR RHETRLVEID NGKQREFESR LADALQELRA bmy_03405T0/1-499 ---------- ---ELRETKR RHETRLVEID NGKQREFESR LADALQELRA BACU003946/1-664 KEELDFQKNI YSEELRETKR RHETRLVEID NGKQREFESR LADALQELRA 251 300 ENSP00000357283/1-664 QHEDQVEQYK KELEKTYSAK LDNARQSAER NSNLVGAAHE ELQQSRIRID ENSBTAP00000023373/1-664 QHEDQVEQYK KDLEKTYSAK LDNARQSAER NSNLAGAAHE ELQQSRIRID ENSTTRP00000001313/1-664 QHEDQVEQYK KELEKTYSAK LDNARQSAER NSNLMGAAHE ELQQSRVRID bmy_03405T0/1-499 QHEDQVEQYK KELEKTYSAK LDNARQSAER NSNLVGAAHE ELQQSRVRID BACU003946/1-664 QHEDQVEQYK KELEKTYSAK LDNARQSAER NSNLVGAAHE ELQQSRVRID 301 350 ENSP00000357283/1-664 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAE KEREMAEMRA ENSBTAP00000023373/1-664 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAD KEREMAEMRA ENSTTRP00000001313/1-664 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAD KEREMAEMRA bmy_03405T0/1-499 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAD KEREMAEMRA BACU003946/1-664 SLSAQLSQLQ KQLAAKEAKL RDLEDSLARE RDTSRRLLAD KEREMAEMRA 351 400 ENSP00000357283/1-664 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG ENSBTAP00000023373/1-664 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG ENSTTRP00000001313/1-664 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG bmy_03405T0/1-499 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG BACU003946/1-664 RMQQQLDEYQ ELLDIKLALD MEIHAYRKLL EGEEERLRLS PSPTSQRSRG 401 450 ENSP00000357283/1-664 RASSHSSQTQ GGGSVTKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK ENSBTAP00000023373/1-664 RASSHSSQTQ SGSSVTKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK ENSTTRP00000001313/1-664 RASSHSSQTQ SGGSITKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK bmy_03405T0/1-499 RASSHSSQTQ SGGSIAKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK BACU003946/1-664 RASSHSSQTQ SGGSTAKKRK LESTESRSSF SQHARTSGRV AVEEVDEEGK 451 500 ENSP00000357283/1-664 FVRLRNKSNE ----DQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT ENSBTAP00000023373/1-664 FVRLRNKSNE ----DQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT ENSTTRP00000001313/1-664 FVRLRNKSNE ----DQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT bmy_03405T0/1-499 FVRLRNKSNE VVPQDQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT BACU003946/1-664 FVRLRNKSNE ----DQSMGN WQIKRQNGDD PLLTYRFPPK FTLKAGQVVT 501 550 ENSP00000357283/1-664 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS ENSBTAP00000023373/1-664 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS ENSTTRP00000001313/1-664 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS bmy_03405T0/1-499 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS BACU003946/1-664 IWAAGAGATH SPPTDLVWKA QNTWGCGNSL RTALINSTGE EVAMRKLVRS 551 600 ENSP00000357283/1-664 VTVVEDDEDE DGDDLLHHHH GSH-CSSSGD PAEYNLRSRT VLCGTCGQPA ENSBTAP00000023373/1-664 VIVVEDDNDE DGDDLLHHHH GSHAGSSSGD PAEYNLRSRT VLCGTCGQPA ENSTTRP00000001313/1-664 VTMVEDDEDE DGDDLLHHHH GSH-GSSSGD PAEYNLRSRT VLCGTCGQPA bmy_03405T0/1-499 VTMVDDDEDE DGDDLLHHHH GSH-GSSSGD PAEYNLRSRT VLCGTCGQPA BACU003946/1-664 VTMVDDDEDE DGDDLLHHHH GSH-GSSSGD PAEYNLRSRT VLCGTCGQPA 601 650 ENSP00000357283/1-664 DKASASGSGA QVGGPISSGS SASSVTVTRS YRSVGGSGGG SFGDNLVTRS ENSBTAP00000023373/1-664 DKASAS-SGA QVGGSISSGS SASSVTVTRS YRSVGGSGGG SFGDSLVTRS ENSTTRP00000001313/1-664 DKASASSSGA QVGGSISSGS SASSVTVTRS YRGVGGSGGG SFGDSLVTRS bmy_03405T0/1-499 DKASASSSGA QVGGSISSGS SASSVTVTRS YRSVGGSGGG SFGDSLVTRS BACU003946/1-664 DKASASSSGA QVGGSISSGS SASSITVTRS YRSVGGSGGG SFGDSLVTRS 651 700 ENSP00000357283/1-664 YLLGNSSPRT QSPQNCSIM ENSBTAP00000023373/1-664 YLLGNSRPRT QSPQNCSIM ENSTTRP00000001313/1-664 YLLGNSRLRT QSPQNCSIM bmy_03405T0/1-499 YLLGNSRPRT QNPQNCSIM BACU003946/1-664 YLLGNSRPRT QNPQNCSIM