Part of scaffold_95 (Scaffold)

For more information consult the page for scaffold_95 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

DCST1 ENSTTRG00000016168 (Bottlenosed dolphin)

Gene Details

DC-STAMP domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015325, Bottlenosed dolphin)

Protein Percentage 88.4%
cDNA percentage 90.99%
Ka/Ks Ratio 0.53829 (Ka = 0.0515, Ks = 0.0956)

DCST1 ENSBTAG00000010655 (Cow)

Gene Details

DC-STAMP domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000014083, Cow)

Protein Percentage 85.65%
cDNA percentage 87.22%
Ka/Ks Ratio 0.2122 (Ka = 0.0861, Ks = 0.4056)

DCST1  (Minke Whale)

Gene Details

DC-STAMP domain containing 1

External Links

Gene match (Identifier: BACU007462, Minke Whale)

Protein Percentage 93.94%
cDNA percentage 95.35%
Ka/Ks Ratio 0.43832 (Ka = 0.0387, Ks = 0.0884)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2352 bp    Location:239295..253850   Strand:+
>bmy_03372
GTCCCTCATCCTCCTTCAGGATCCCCCAAGTCCCTGCCACCCTCATCCAGATTCCCCCAGCCTCTACCCCGCTGCAAGCCCCTAATCCTAGTGAACCACAGCCCAGCCGGAAGAGTGGTATGTTGGCCTTGCTGGGCTAAACTCTTCGACCCTTCAGCGGTGCAGAGGTTCCTGAGCTGGGGGCTGCCCGTCTCCTGTAGCCGATTCCTGTGGCGCCAGCGGGGCGAGTTTCCGGTCAGTGCTTTCCTGCTGGGGGCAGGCACCGGGGGGCTCCTGGCCATAGGTCTCTTTCAGCTCCTGGTGAACCCTATGAACATCTATGAAGATCAGAAGATGGTGACGTTGTACAGCTTGGTGGGCTTGGGGGCCATAGGCTGGGGGACCTCCCCTCACATCCGCTGTGCCAGCCTCCTGCTAGTACCCAAGATGCTGGGCAAGGAGGGCCGGCTCTTTGTGCTGGGATACGCCTTGGCCGCCATCTATGAGGGACCAGTGGCCAACCTGCGGCACAACCTCAACGAGGTGATAGCATCGCTCGGCTGCACTGTGGAGCTGCAGATCAACAACACCCGCTCGGCCTGGCGTGTCTCCACAGCCCCCCTGCGGGCAGTGTTCAAGGACCTGCTGAGCAGCAAAGAGTCATTGAAAGCCGAGACTCAGAACATCACCAACTCCTTTGAGGAACTGGATGCCCAGGTGAACAGTGAGAGTGGATACGCGCCCGAGGATGCCGAGGGCTTGGAGGAGACAGCCCCAGGCAGAGAGACCCTCCGCGCCTCAGCCTTCAGACACCGCCTCTCTACACAGAAGATGTATGAGCTGAAGACCAAGCTGCGTTGCTCCCATGTGGTGAACAAGGCCATGATAAACTGCCGCCGCTGGTTTGACCAAAAGCACAGAGAGTGCACTCAACRCATCTGGGTCCCACTGCTCAACCACCTGCTCTGCCTGCCCATGAAGTTCAAGTTCTTCTGTGGCATTGCCAAGGTGATGGAAGTTTGGTGCCGTAGTCGCATCCCAGTGGAAGGCAACTTTGGGCAGACCTATGACTCCCTCAACCAGTCTATTCGTGGCCTGGAGGGGGAATTTTCAGCCACTATTAACCTCAAGGAAGAGAAGCGGGCTGGGGTGCTGGGCCTCAACACGAGCTGGGAACACGTGAGCACCGAGGTGCGGGACTACGTGAGACGCCAGGAGGCCCAGCTCGAGTGGGTCCTGCGGCTGCTGCACGTGCTGCTCTCCTGCACCTTCCTGCTTGTCCTCCACGCGTGCTTCTCCTATGTGGACAGCTATAACGGGGACATCCGCTTCGACAACATCTACATCAGCACCTACTTCTGTCAGATCGATGAACGCAGGAAGAAGCTGGGCAAGCAGACTCTGCTGCCGCTCCGCAAAGCCGAGAAGAAAACCGTCATCTTCCCCTGGGACCCCACTATCCAGGCCTCAGAAATGAGAAATGTGGTGAGGATGGCATGGAGGGCAGGCCCCTGGATCCTACTAGAGGCAGGGATCTGCGGGGTGGAGGGCAAAAGCGTCAGAGGGGACTCCATGCCAGGGCCAAAGGCGCTGCCCAGCTCTGCCCCTCCTGCTCCCTGGGCAGATAAGGGAGCTCGCGGAGACACTGCCCGTGCTGCTGCTGCTACTACTGCTGTGTGGCCTGGACTGGGCTCTCTACTCCATCTTCGACACCATCCGCCACCACTCCTTCGTGCAGTACTCCTTCCGCATCATAAACTGGAGGTGAAAGTCGGGGGAGACTCCATGCTTGCCCGGCTTCTTCGGAATACCATCGGGGCCCTGAACACCTCCTCGGAGATGGTGGTGGAATCCAACAACATGCCCTGCCTGCCCCAGCCCGTGCCCCTGAGTACCAGGGCCTATTTGAGGGCTGCACTACCAAGCAGCCTGCTAGTGTGTCTCTGCCTGCTCCAAGCTTTCGGCTACCGGCTCCGGAGGGTCATCGCAGCCTTCTACTTCCCCAAGCGTGAGAAGAAGCGTATCCTTTTCCTCTACAACGAGCTCCTGAGGAAGAGAGCAGCCTTCACCCAACTGAGGAGGGCCACCATCGTGAGGCGGGCACGACAGCAGAGGGCTCCTCGCCGCCACCTGGCGGACATCCTGCACCGCCGCTGCCTGCCCCTCTTGCGCCCCTGGCTGCGCAGGCGATGCGTGGTGTGCCAGGCACCCGAGACGCCCGAGTCCTACGTGTGCCCTACGCCGGATTGCGAGGCGGTGTACTGCCGGTCGTGCTGGAACGACATGCGGCAGCGGTGCCCGGTCTGCACACCCAGCGAGGAGCTCTCCTCCTCCGCCTACAGCGACAGCAACGACGATGCTACCTACGCGGAG

Related Sequences

bmy_03372T0 Protein

Length: 784 aa      View alignments
>bmy_03372T0
VPHPPSGSPKSLPPSSRFPQPLPRCKPLILVNHSPAGRVVCWPCWAKLFDPSAVQRFLSWGLPVSCSRFLWRQRGEFPVSAFLLGAGTGGLLAIGLFQLLVNPMNIYEDQKMVTLYSLVGLGAIGWGTSPHIRCASLLLVPKMLGKEGRLFVLGYALAAIYEGPVANLRHNLNEVIASLGCTVELQINNTRSAWRVSTAPLRAVFKDLLSSKESLKAETQNITNSFEELDAQVNSESGYAPEDAEGLEETAPGRETLRASAFRHRLSTQKMYELKTKLRCSHVVNKAMINCRRWFDQKHRECTQXIWVPLLNHLLCLPMKFKFFCGIAKVMEVWCRSRIPVEGNFGQTYDSLNQSIRGLEGEFSATINLKEEKRAGVLGLNTSWEHVSTEVRDYVRRQEAQLEWVLRLLHVLLSCTFLLVLHACFSYVDSYNGDIRFDNIYISTYFCQIDERRKKLGKQTLLPLRKAEKKTVIFPWDPTIQASEMRNVVRMAWRAGPWILLEAGICGVEGKSVRGDSMPGPKALPSSAPPAPWADKGARGDTARAAAATTAVWPGLGSLLHLRHHPPPLLRAVLLPHHKLEVKVGGDSMLARLLRNTIGALNTSSEMVVESNNMPCLPQPVPLSTRAYLRAALPSSLLVCLCLLQAFGYRLRRVIAAFYFPKREKKRILFLYNELLRKRAAFTQLRRATIVRRARQQRAPRRHLADILHRRCLPLLRPWLRRRCVVCQAPETPESYVCPTPDCEAVYCRSCWNDMRQRCPVCTPSEELSSSAYSDSNDDATYAE