Part of scaffold_98 (Scaffold)

For more information consult the page for scaffold_98 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RASGEF1C ENSTTRG00000000756 (Bottlenosed dolphin)

Gene Details

RasGEF domain family, member 1C

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000712, Bottlenosed dolphin)

Protein Percentage 98.5%
cDNA percentage 98.71%
Ka/Ks Ratio 0.2293 (Ka = 0.0073, Ks = 0.0316)

RASGEF1C ENSBTAG00000021360 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028478, Cow)

Protein Percentage 88.04%
cDNA percentage 88.71%
Ka/Ks Ratio 0.24455 (Ka = 0.0807, Ks = 0.3302)

RASGEF1C  (Minke Whale)

Gene Details

RasGEF domain family, member 1C

External Links

Gene match (Identifier: BACU002905, Minke Whale)

Protein Percentage 97.06%
cDNA percentage 97.89%
Ka/Ks Ratio 0.40056 (Ka = 0.017, Ks = 0.0424)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1461 bp    Location:1865476..1832652   Strand:-
>bmy_03359
ATGCCCCGGACACTGAGCACCTCCGACATGGTCACTCCAGGCAGCCTCGGCCCACCCCACCCTGAGCCCACGGATGGTGAGCAGGCCGGGCAGCCCCTCCTGGATGGAGCTCCATCCTCAGCCTCCCTGGACACCCTGATCGAGCAGCTGGTGCCCAAAGCTGACTACTACCCTGAGAAAGCCTACATCTTTACCTTCCTGCTGAGCTCCCGCCTCTTCATCGAGCCCCGGGAGCTCCTGGCCCGGGTCTGCCACTTGTGCATCGAGCAGCAGCAGCTGGACAAGCCAGTGCTGGACAAGGCCCAGGTCCGGAAGTTTGGCCCCAAACTGCTCCAGTTGTTGGCCGAGTGGACAGAGACGTTCCCGCGGGACTTCCAGGAGGAGTCGACCATCAGTCACCTGAAGGACGTGGTGGGCCGCATCGCCCCCTGTGACGAGATATTAGACATGCGGAGACAGGTTTCCAGGCCTGAGCACCCTCTCTCTACCCTCCGCCAGGCATACCGAAAGAGGATGCATCAGCTCCTGCAGGCTCTGCACCAGAAGCTGGCGGCTCTGGGCCAGGGGCCGGAAAGCCTGCTGGGCACTGACAAGCCCATCTCCTACAGGAACAAGCCTCCAGCCTCTATCCACAGGGAGCTCCTCAGCATCTGCAGTGACCCCTACACACTGGCTCAGCAGCTGACCCACGTGGAGCTGGAACGGCTACGACACATTGGACCTGAGGAATTTGTCCAGGCTTTTGTGAACAAGGACCCTCTGGCCAGCACAAAGCCTTGTTTCAGTGACAAGACTAACAACCTGGAAGCTTACGTGAAATGGTTCAACAGATTGTGCTACCTCGTGGCTACTGAGATCTGCATGCCGGCCAAGAAGAAACAGAGGGCCCAGGTGATTGAGTTCTTCATCGACGTAGCCCGTGAGTGCTTCAACATCGGCAACTTCAACTCCCTAATGGCCATCATCTCTGGCATGAACATGAGCCCTGTCTCAAGGCTGAAGAAGACCTGGGCCAAAGTGAAGACAGCCAAGTTTTTCATCCTCGAGCACCAGATGGACCCAACAGGGAATTTCTGCAACTATAGAACAGCCCTACGCGGGGCAGCCCACCGCTCCCTGACCGCCCACAGCAGCCGGGAGAAGATCGTCATCCCCTTCTTCAGCCTGCTCATCAAAGACATCTACTTCCTAAACGAAGGCTGTGCCAACCGCCTCCCCAATGGACACGTCAACTTTGAGAAATTTCTGGAGCTGGCCAAGCAAATAGGAGAGTTCATCACATGGAAACAAGTGGAGTGTCCCTTCAAGCAAGACCCCAGCATCACCCACTACCTGCACACTGCTCCCATCTTCAGCGAGGATGGTCTTTATTTGGCTTCTTATGAAAGTGAGAGCCCAGAGAACCAAACAGAAAAAGAGAGGTGGAAATCTCTAAGGTCTTCTATTCTGGGGAAGACGTGA

Related Sequences

bmy_03359T0 Protein

Length: 487 aa      View alignments
>bmy_03359T0
MPRTLSTSDMVTPGSLGPPHPEPTDGEQAGQPLLDGAPSSASLDTLIEQLVPKADYYPEKAYIFTFLLSSRLFIEPRELLARVCHLCIEQQQLDKPVLDKAQVRKFGPKLLQLLAEWTETFPRDFQEESTISHLKDVVGRIAPCDEILDMRRQVSRPEHPLSTLRQAYRKRMHQLLQALHQKLAALGQGPESLLGTDKPISYRNKPPASIHRELLSICSDPYTLAQQLTHVELERLRHIGPEEFVQAFVNKDPLASTKPCFSDKTNNLEAYVKWFNRLCYLVATEICMPAKKKQRAQVIEFFIDVARECFNIGNFNSLMAIISGMNMSPVSRLKKTWAKVKTAKFFILEHQMDPTGNFCNYRTALRGAAHRSLTAHSSREKIVIPFFSLLIKDIYFLNEGCANRLPNGHVNFEKFLELAKQIGEFITWKQVECPFKQDPSITHYLHTAPIFSEDGLYLASYESESPENQTEKERWKSLRSSILGKT*