Part of scaffold_94 (Scaffold)

For more information consult the page for scaffold_94 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

UBE4A ENSTTRG00000004271 (Bottlenosed dolphin)

Gene Details

ubiquitination factor E4A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004027, Bottlenosed dolphin)

Protein Percentage 87.55%
cDNA percentage 87.68%
Ka/Ks Ratio 0.19708 (Ka = 0.0038, Ks = 0.0193)

UBE4A ENSBTAG00000019725 (Cow)

Gene Details

Ubiquitin conjugation factor E4 A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000026289, Cow)

Protein Percentage 98.23%
cDNA percentage 96.46%
Ka/Ks Ratio 0.07701 (Ka = 0.0085, Ks = 0.1109)

UBE4A  (Minke Whale)

Gene Details

ubiquitination factor E4A

External Links

Gene match (Identifier: BACU017318, Minke Whale)

Protein Percentage 99.51%
cDNA percentage 99.41%
Ka/Ks Ratio 0.13851 (Ka = 0.0023, Ks = 0.0164)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3168 bp    Location:833312..799384   Strand:-
>bmy_03272
ATGACAGACCAGGAGAATAACAACAACATCTCAAGTAACCCCTTTGCTGCTCTTTTTGGCTCCCTGGCTGATGCCAAGCAGTTTGCAGCAATCCAAAAAGAGCAGCTGAAGCAGCAATCTGATGAACTCCCAGCCAGCCCAGATGACTCAGATAATAGTGTGTCAGAGAGCCTGGATGAATTTGATTACTCTGTGGCTGAGATTAGCCGCTCATTCCGTTCACAGCAGGAAATATGTGAGCAACTCAACATCAATCACATGATCCAAAGGATCTTCCTCATCACTCTGGACAACAGTGACCCAAGCCTGAAAAGTGGGAATGGCATCCCCAGCCGTTGTGTGTATTTGGAAGAAATGGCAGTAGACCTGGAAGATCAAGACTGGCTTGATATGAACAACGTAGAGCAGATTACCAAAGTTCCAGAGAATCTGCTACCCTTTGCAGTGCAGTGCAGGAACCTCACTGTGTCCAATACCCGAACAGTTCTCCTCACCCCAGAGATCTATGTTGACCAAAACATCCACGAGCAACTGGTAGATTTGATGTTGGAAGCCATCCTAGGAGGCCATTTTGAAGGTGTAGCTGAGTTTCTGGATGAGGTCATCGAAGCCTTGATACTGGATGAGGAAGTTCGAACATTTCCAGAAGTCATGATTCCAGTGTTTGATATTTTATTGGGCCGAATAAAAGATCTAGAACTCTGCCAGATCCTGTTGTACGCATATCTGGACATTCTTCTGTATTTCACTAGGCAAAAGGATATGGCAAAGGTTTTTGTAGAATACATTCAGCCCAAGGATCCTAGTAATGGGCAGATGTACCAGAAGACCTTGCTGGGAGTAATCCTGAATATCTCCTGCTTATTAAAGACTCCGGGTGTAGTAGAAAATCATGGCTACTTCCTGAATCCATCTCGTTCCAGTCCCCAGGAGATCAAAGTACAAGAGGCCAACATTCATCAGGTGGAGCTGTTTGCCGGTTTCATGGCTCGGTTCCATGAAAAGATCTACCAGATGTTGAAGAACTTACTCCAGCTCTCTCCAGAAACCAAACACTGTATCTTGTCCTGGCTTGGAAACTGTTTGCATGCAAATGCAGGCCGCACCAAGATTTGGGCCAATCAGATGCCAGAAATCTTCTTCCAAATGTATGCCTCGGATGCCTTCTTTCTGAATCTGGGTGCTGCTCTCCTGAAGTTGTGCCAGCCATTTTGCAAACCCAGATCCTCTCGGCTCCTCACCTTTAATCCCACTTACTGTGCCCTGAAGGAGTTGAATGATGAAGAACGAAAAATAAAAAATGTACACATGAGAGGTTTGGACAAAGAAACCTGTTTGATCCCAGCTGTGCGGGAGCCAGAGTTTCCCCAGAACTACAACCTTGTAACAGAAAACCTTGTCCTGACAGAGTACACCTTGTACTTGGGATTTCACAGGTTGCATGATCAGATGGTAAAAATCAACCAAAATCTGCATCGGCTGCAGGTAGCCTGGCGGGATGCTCAGCAAAGTTCTAGCCCTGCTGCTGACAACCTCCGTGAGCAGTTTGAACGACTGATGACCATCTATCTTTCTACTAAGACTGCCATGACTGAGCCGCAAATGCTGCAAAACTGCCTAAATTTGCAGGTGTCCATGGCTGTTCTCCTAGTTCAACTGGCCATAGGCAATGAGGGCTCACAGCCGATAGAGCTAACTTTTCCTTTGCCAGATGGCTACAGTTCTTTGGCTTACGTGCCAGAATTTTTTGCAGATAACTTGGGTGATTTCCTCATTTTTCTCCGCCGCTTTGCCGATGACATCTTGGAGACATCAGCAGATTCCCTGGAACATGTCCTTCATTTTATCACCATTTTCACTGGAAGCATAGAAAGGATGAAGAATCCCCACCTAAGGGCCAAACTCGCTGAGGTGCTGGAAGCAGTGATGCCCCACATGGATCAGACCCCAAATCCCTTGGTATCCAGTGTGTTCCACCGGAAACGTGTGTTCTGCAACTTTCCCTATGCATCCCACCTTGCAGAAGCTCTAATCAAGGTCTTTGTGGACATTGAGTTTACAGCTCAGTCCTCGTCCTTTTCTGAGTACTGTATCGTTTATATGTCTCCCTCTTGTTCTGTCGCACCACCTTTGCTGATGTTTTGCTCTTACCTTACTGCAGGAGACCCCCATCAGTTTGAGCAGAAGTTTAATTACCGCCGCCCCATGTATCCCATCCTCAGGTACATGTGGGGGACAGATGCCTATCGAGAGAGCATTAAGGATTTGGCTGACTATGCCTCTAAGAATTTAGAAGCCATGAATCCCCCACTTTTCCTCCGCTTTCTTAACCTGCTAATGAACGATGCCATCTTCCTTTTGGATGAAGCCATACAGTATTTGAGCAAGATAAAAATTCAACAAATTGAGAAGGACCGAGGTGAATGGGACAGTCTGACTCCAGAAGCCCGCCGAGAGAAGGAGGCTGGCCTACAGATGTTTGGACAGCTGGCACGTTTCCATAACATCATGTCCAATGAAACAATTGGTACCCTTGCGTTTCTGACATCAGAGATCAAATCCCTCTTTGTGCATCCTTTCCTGGCTGAGCGCATCATCTCCATGCTGAACTACTTCCTGCAGCACCTGGTTGGCCCCAAGATGGGGGCCTTAAAAGTCAAGGACTTCAGTGAATTTGACTTCAAACCCCAGCAGCTCGTTTCAGATATCTGCACCATCTACTTAAATCTTGGGGATGAGGAGAATTTCTGTGCCACTGTGCCCAAGGATGGACGTTCCTATTCCCCAACTCTCTTTGCACAGACAGTCCGAGTCCTGAAGAAAATAAATAAGCCTGGGAATATGATTGTGGCTTTCAGCAACTTAGCAGAGAGAATCAAGTCTCTAGCAGACCTCCAACAACAGGAAGAGGAGACCTATGCAGATGCCTGTGATGAGTTTCTGGATCCCATCATGAGCACACTGATGTCTGACCCTGTGGTGCTGCCGTCTTCCAGAGTCACTGTGGATAGATCCACCATTGCCAGACATTTGCTCAGTGACCAAACAGATCCCTTTAACCGTAGTCCCCTCACCATGGACCAGATCCGGCCAAACACAGAACTAAAAGAAAAAATCCAACGGTGGCTCGCAGAGAGGAAACAACGACAAAAGGAGCAACTTGAATAA

Related Sequences

bmy_03272T0 Protein

Length: 1056 aa      View alignments
>bmy_03272T0
MTDQENNNNISSNPFAALFGSLADAKQFAAIQKEQLKQQSDELPASPDDSDNSVSESLDEFDYSVAEISRSFRSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVDLEDQDWLDMNNVEQITKVPENLLPFAVQCRNLTVSNTRTVLLTPEIYVDQNIHEQLVDLMLEAILGGHFEGVAEFLDEVIEALILDEEVRTFPEVMIPVFDILLGRIKDLELCQILLYAYLDILLYFTRQKDMAKVFVEYIQPKDPSNGQMYQKTLLGVILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQEANIHQVELFAGFMARFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCALKELNDEERKIKNVHMRGLDKETCLIPAVREPEFPQNYNLVTENLVLTEYTLYLGFHRLHDQMVKINQNLHRLQVAWRDAQQSSSPAADNLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELTFPLPDGYSSLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHMDQTPNPLVSSVFHRKRVFCNFPYASHLAEALIKVFVDIEFTAQSSSFSEYCIVYMSPSCSVAPPLLMFCSYLTAGDPHQFEQKFNYRRPMYPILRYMWGTDAYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIEKDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMSDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQRQKEQLE*