Sequence detailsbmy_01516 (Coding sequence)

Part of scaffold_36 (SequenceType object (1))

For more information consult the page for scaffold_36 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ODF3L1ENSBTAG00000019506 (Cow)

Gene Details

Outer dense fiber protein 3-like protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000025983, Cow)

Protein Percentage 58.21%
cDNA percentage 67.5%
Ka/Ks Ratio 0.46073 (Ka = 0.3662, Ks = 0.7947)

Additional orthologs identified in other species via the OPTIC pipeline.

ODF3L1 (Human)   Odf3l1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 828 bp    Location:790821..793985   Strand:+
Raw sequence 
>bmy_01516
ATGAAACTACCCAAGGGGGTCAGGAACCCTGTGTTCTATGGGCAGCAGCCAGAGAGGAAGGTGCAGGTGCCCTCAGGGCAGGAGGTAAAGCAGACCCCTGTTGTCCTGGCAACAATTAAAGGTCCGGGGCCTGCTAAATACCTCCGGCCATCCTGCACGGGCTACACAGACCACGACGTCTCCATGTTCCAGGAGCCAGCCTACACCCTGCACACCCGGCACTCGGAGAGGCGGATCATGGACATATGCAACCCTGGGCCTTGCTATTTCTTGGATCCTAAAATAACTCGGTTTGGAATGTCCAGCTGCCCTCAGGTTCCCATGGCGGAGCGCATCTCTAACCTGCGCCTGAGCCCCACCCTGGCCTCCTGCCATTACCACCTGGAGAAGACCCACCCGCCTGGGGAGCGCAGGGCTCCCAAGTACACCTTTGGCTACCGGTGCCCATACAGAGTGATGGACCCCAATCCGGGCCCCAACCAGTACCAGCTGCCAGTCCTGCTGGGGCCCAACCTGCCCGCCAACAGAGCTGCTCCTTGCTACAGCCTGAGCCCCTTGGACAAGAACTGGTTCTACAAGGAGGATGTGGCAGGAGGCCCTGGACCGGCCATGCACGCCCGGCCTGAGCCGTCTGTCTACCAGAACCGCAGCCCCATGTACAGCATGGCCAGGCGCTTTGCCTACCCGGTGGACCACACACCTCGGCCCGGCCCCGGCTCCCATGACGTCCAGCAGGTCACGGTGCACAAGTCCCGCACGCCCGCTTTCACCATGGGCATCAAGCACTCGCCCCACCTGTGCCCACTGATTGTCGACATTCACGACTGA

Related Sequences

bmy_01516T0 SequenceType object (3)

Length: 276 aa      View alignments
>bmy_01516T0
MKLPKGVRNPVFYGQQPERKVQVPSGQEVKQTPVVLATIKGPGPAKYLRPSCTGYTDHDVSMFQEPAYTLHTRHSERRIMDICNPGPCYFLDPKITRFGMSSCPQVPMAERISNLRLSPTLASCHYHLEKTHPPGERRAPKYTFGYRCPYRVMDPNPGPNQYQLPVLLGPNLPANRAAPCYSLSPLDKNWFYKEDVAGGPGPAMHARPEPSVYQNRSPMYSMARRFAYPVDHTPRPGPGSHDVQQVTVHKSRTPAFTMGIKHSPHLCPLIVDIHD*