Sequence detailsbmy_01509 (Coding sequence)

Part of scaffold_36 (SequenceType object (1))

For more information consult the page for scaffold_36 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MAN2C1ENSTTRG00000011418 (Bottlenosed dolphin)

Gene Details

mannosidase, alpha, class 2C, member 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000010846, Bottlenosed dolphin)

Protein Percentage 94.9%
cDNA percentage 95.88%
Ka/Ks Ratio 0.25239 (Ka = 0.0177, Ks = 0.0702)

BT.20028ENSBTAG00000007368 (Cow)

Gene Details

alpha-mannosidase 2C1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009690, Cow)

Protein Percentage 95.99%
cDNA percentage 93.42%
Ka/Ks Ratio 0.06919 (Ka = 0.0197, Ks = 0.2847)

MAN2C1 (Minke Whale)

Gene Details

mannosidase, alpha, class 2C, member 1

External Links

Gene match (Identifier: BACU017890, Minke Whale)

Protein Percentage 99.03%
cDNA percentage 99.12%
Ka/Ks Ratio 0.20983 (Ka = 0.0048, Ks = 0.0229)

Additional orthologs identified in other species via the OPTIC pipeline.

MAN2C1 (Human)   Man2c1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3333 bp    Location:507728..496512   Strand:-
Raw sequence 
>bmy_01509
CAGAGCAGCGAGACTTCACAGAGCCGCCGGTGTTCCAAGAAAAGCTGCCCGGGCCTGGAAGGCGCCCTTCGGACGCCGGAACCTTTGGTTCCAGGCCGTGGACCGCGCCGGCAGCGTTTGGGGCCTTCCGGGGAGAGGAGAGAGCGCGCGGCGATGGCGGCGGCGCCGGCGCTGAAGCACTGGCGCACTACGCTGGAGCGGGTGGAGAAATTCGTGTCGCCGCTCTACTTTACCGACTGTAATCTCCGCGGCAGGCTCTTCGGAGACAGCTGCCCAGTGGCCGAGCTCTCCAGCTTCTTGACGCCCGAAAGGCTTCCCTACCAGGAGGCAGTCCAGCAGGATTTCCGCCCCGCGCAGGTCGGCGACAGCTTCGGACCCACATGGTGGACCTGTTGGTTCCGGGTGGAGCTGACCATCCCAGAGGCATGGGTGGGTCAGGAAGTTCACCTTCGCTGGGAAAGTGATGGAGAAGGCCTGGTGTGGCGTGATGGGGAACCTGTCCAGGGTTTGACCAAAGAGGGGGAGAAGACCAGCTATGTCCTGACTGACAAGCTGGGGGAAGAAGACCCCCGGAGCCTGACCCTCTATGTGGAAGTAGCCTGCAATGGGCTCCTGGGGGCCGGGAAGGGACACATGATCGCAGCCCCTGACCCAGAGAAGATGTTCCAGGTGAGCCGGGCTGAGCTGGCCGTGTTCCACCGGGATGTCCACAAGCTCCTGGTGGATCTGGAGCTGCTGCTGGGTGTGGCCAAGGGCCTCGGGGAGGACAACCAGCGCAGCTACATGGCCCTGTACACAGCCAACCAGATGGTGAACGTATGTGACCCCGCCCAGCCGGAGACCTTCCCAGTGGCCCAGGCCCTGGCCTCCAAGTTCTTTGGCCAACGTGGGGCCTGGCTCTGGCCCTTCAAGGAGACCGTGCGGAAATGTGCCCGGAGCTGGGTGACAGTCGTTCAGCTCATGGAGCGGAATCCTGAGTTCATCTTTGTCTGCTCCCAGGCGCAGCAGCTCGCGTGGGTGAAGAGCCACTACCCTGGCCTGCATGTCCGGCTCCAGGAGTTCGCCTGCCATGGGCAATTTGTGCCCGTGGGGGGCACCTGGGTGGAGATGGATGGGAACCTTCCCAGTGGAGAGGCCATGGTGAGGCAGTTCCTGCAGGGACAGAGCTTCTTCCTGCAGGAGTTTGGGAAGATGTGTTCCGAGTTCTGGCTGCCAGACACATTCGGCTACTCAGCGCAGCTCCCACAGATCATGCGCAGCTGTGGCATCAGGCGCTTCCTCACCCAAAAACTGAGCTGGAACTTGGTGAACTCCTTCCCGCACCATACCTTTTTCTGGGAGGGGCTGGATGGCTCCCGGGTGCTGGCCCACTTCCCGCCTGGTGACTCATATGGGATGCAGGGCAGTGTGGAGGAGGTGAGAGGGCACCTAGTGGCCAAGGTCGGGGATGGGAGGCAGGCTGGAGAGGGCTGGGTGTCCTGTCCTAAGCTGACCCTGAGCCCGCCTGTGCAGGTGCTGAAGACTGTGGCCAAAAACCGGGACAAGGGGCGTACCAACCATAGTGCCTTCCTCTTTGGCTTTGGGGATGGGGGTGGTGGCCCCACCCAGACCATGGTGGACCGCCTGAAGCGGCTGTGCAATACAGATGGGCTGCCCAGGGTGCAGCTCTCTTCTCCGGAGCGACTCTTCTCGGCGCTGGAGGGCCACTCGGGGCAGCTGTGCACGTGGGTCGGAGAGCTCTTCCTGGAGCTACATAATGGCACCTACACCACCCATGCCCAGATCAAGAAGGGGAACCGGGAGTGTGAGCGGATCCTTCACGACGTGGAGCTGCTCAGCAGCCTGGCCCTGGCCCGCAGTGCCCAGTTCCTCTACCCGGCCGCCCAGCTGCAGGACCTCTGGAGGCTCCTGCTCCTGAACCAGTTCCACGATGTGGTGACTGGAAGCTGCATCCAGCTGGTGGCAGAGGAAGCCATGTGCCACTACGAAGACATCCGTTCCCGTGGCAACACACTGCTCAGCGCTGCAGCCGCAGCCCTTTGTGCTGGGGAGCCAGGTCCTGAGGGCCTCCTCATTGTCAACACACTGCCCTGGAAGCGCACTGAAGTGTTGGCCCTGCCCAGGCCTGGTGGGGCCCACTGCCTAGCTCTGGTGACAGTGCCCGGCATGGGCTACGCTCCTGCTCCCACCCCCATCTCACTGCAGCCCCTGCTGCCCCAGCAGCCTGTGTTTGTAGTGCAGGAGACTGACGGTTCTGTGACTCTGGACAATGGCATCATCCGGGTGAGACTGGACCCAACTGGCCGCCTGACGTCTCTGGTGCTGGTGGCCTCTGGCAGGGAGGCCATTGCTGAGGGTGCTGTGGGGAACCAGTTTGTGCTGTTTGATGATGTCCCCCTGTACTGGGACGCGTGGGACGTCATGGACTACCACCTAGAAACACGGAAGCCAGTGCTGGGCCAGGCAGGGACCTTGGCCGTGGGCACTGAGGGTGGCATGCGGGGCAGCGCCTGGTTTCTGCTGCAGATCAGCCCCAACAGTCGGCTCAGCCAAGAGATTGTGCTGGACGTCGGCTGCCCCTATGTCCGCTTCCACACCGAGGTGCACTGGCACGAGGCCCACAAGTTCCTGAAGGTGGAGTTCCCTGCCCGTGTGCGGAGCCCCCAGGCCACCTTTGAGGTCCAGTTCGGACATCTGCAGCGGCCCACCCACTACAACACCTCTTGGGACTGGGCCCGATTTGAGGTGTGGGCCCACCGCTGGATGGATCTGTCAGAGCACGGCTTTGGGCTGGCTCTGCTCAATGACTGCAAGTATGGCGCGTCAGTACGAGGCAGCGTCCTCAGCCTCTCCCTCTTGCGGGCGCCCAAGTCCCCTGACTCCACGGTTGACATGGGGCGCCACGAGTTCACCTACGCGCTGATGCCGCATGAGGGGTCCTTCCAGGACGCTGGCGTTATCCCCGCTGCCTACAGCCTCAACTTCCCCCTGCTGGCGCTGCCCGCCCCGGGCCCGGCACCCGCCGCCGCCTGGAGCGCCTTTTCAGTGTCCTCGCCCGCAGTCGTGTTGGAGACCGTCAAGCAGGCAAGGGCCGGTGGGGCGGAGACTAGCCTCCAGGGCCGCAAGCTGGTCCTGAGGCTGTACGAGGCCCACGGCAGCCACGTGGACTGCTGGCTGCACACGTCGCTGCCCGTTCAGGAGGCCGTCCTCTGTGACCTCCTGGAGCGCCGTGACCCTGCTGGCCCCCTGCCCCTTCGGGACAGCCGCCTGAAGCTCACCTTTTCTCCCTTCCAAGTGCAGTCCCTGTTGCTCGTGCTGCAGCCCGCACCGCGC

Related Sequences

bmy_01509T0 SequenceType object (3)

Length: 1111 aa      View alignments
>bmy_01509T0
QSSETSQSRRCSKKSCPGLEGALRTPEPLVPGRGPRRQRLGPSGERRERAAMAAAPALKHWRTTLERVEKFVSPLYFTDCNLRGRLFGDSCPVAELSSFLTPERLPYQEAVQQDFRPAQVGDSFGPTWWTCWFRVELTIPEAWVGQEVHLRWESDGEGLVWRDGEPVQGLTKEGEKTSYVLTDKLGEEDPRSLTLYVEVACNGLLGAGKGHMIAAPDPEKMFQVSRAELAVFHRDVHKLLVDLELLLGVAKGLGEDNQRSYMALYTANQMVNVCDPAQPETFPVAQALASKFFGQRGAWLWPFKETVRKCARSWVTVVQLMERNPEFIFVCSQAQQLAWVKSHYPGLHVRLQEFACHGQFVPVGGTWVEMDGNLPSGEAMVRQFLQGQSFFLQEFGKMCSEFWLPDTFGYSAQLPQIMRSCGIRRFLTQKLSWNLVNSFPHHTFFWEGLDGSRVLAHFPPGDSYGMQGSVEEVRGHLVAKVGDGRQAGEGWVSCPKLTLSPPVQVLKTVAKNRDKGRTNHSAFLFGFGDGGGGPTQTMVDRLKRLCNTDGLPRVQLSSPERLFSALEGHSGQLCTWVGELFLELHNGTYTTHAQIKKGNRECERILHDVELLSSLALARSAQFLYPAAQLQDLWRLLLLNQFHDVVTGSCIQLVAEEAMCHYEDIRSRGNTLLSAAAAALCAGEPGPEGLLIVNTLPWKRTEVLALPRPGGAHCLALVTVPGMGYAPAPTPISLQPLLPQQPVFVVQETDGSVTLDNGIIRVRLDPTGRLTSLVLVASGREAIAEGAVGNQFVLFDDVPLYWDAWDVMDYHLETRKPVLGQAGTLAVGTEGGMRGSAWFLLQISPNSRLSQEIVLDVGCPYVRFHTEVHWHEAHKFLKVEFPARVRSPQATFEVQFGHLQRPTHYNTSWDWARFEVWAHRWMDLSEHGFGLALLNDCKYGASVRGSVLSLSLLRAPKSPDSTVDMGRHEFTYALMPHEGSFQDAGVIPAAYSLNFPLLALPAPGPAPAAAWSAFSVSSPAVVLETVKQARAGGAETSLQGRKLVLRLYEAHGSHVDCWLHTSLPVQEAVLCDLLERRDPAGPLPLRDSRLKLTFSPFQVQSLLLVLQPAPR