KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:39:05 2014 Check: 00 .. Name: ENSP00000457788/1-1057 Len: 1145 Check: 5263 Weight: 1.00 Name: ENSTTRP00000010846/1-1037 Len: 1145 Check: 2846 Weight: 1.00 Name: ENSBTAP00000009690/1-1040 Len: 1145 Check: 6276 Weight: 1.00 Name: bmy_01509T0/1-1111 Len: 1145 Check: 7470 Weight: 1.00 Name: BACU017890/1-1045 Len: 1145 Check: 8950 Weight: 1.00 // 1 50 ENSP00000457788/1-1057 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010846/1-1037 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000009690/1-1040 ---------- ---------- ---------- ---------- ---------- bmy_01509T0/1-1111 QSSETSQSRR CSKKSCPGLE GALRTPEPLV PGRGPRRQRL GPSGERRERA BACU017890/1-1045 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000457788/1-1057 -MAAAPALKH WRTTLERVEK FVSPLYFTDC NLRGRLFGAS CPVAVLSSFL ENSTTRP00000010846/1-1037 -MAAAPALKH WRTTLERVEK FVSPLYFTDC NLRGRLFRDS CPVTELSSFL ENSBTAP00000009690/1-1040 -MAAAPALKH WRTTLERVEK FVSPLYFTDC NLRGRLFGDS CPVAELSSFL bmy_01509T0/1-1111 AMAAAPALKH WRTTLERVEK FVSPLYFTDC NLRGRLFGDS CPVAELSSFL BACU017890/1-1045 -MAAAPALKH WRTTLERVEK FVSPLYFTDC NLRGRLFGDS CPVAELSSFL 101 150 ENSP00000457788/1-1057 TPERLPYQEA VQRDFRPAQV GDSFGPTWWT CWFRVELTIP EAWVGQEVHL ENSTTRP00000010846/1-1037 TPERLPYQEA VQQDFRPAQV GDSFGPTWWT CWFRVELTIP EAWVGQEVHL ENSBTAP00000009690/1-1040 TPERLPYQEA VQQDFRPAQV GDSFGPTWWT CWFRVELTIP EAWVGQEVHL bmy_01509T0/1-1111 TPERLPYQEA VQQDFRPAQV GDSFGPTWWT CWFRVELTIP EAWVGQEVHL BACU017890/1-1045 TPERLPYQEA VQQDFRPAQV GDSFGPTWWT CWFRVELTIP EAWVGQEVHL 151 200 ENSP00000457788/1-1057 CWESDGEGLV WRDGEPVQGL TKEGEKTSYV LTDRLGERDP RSLTLYVEVA ENSTTRP00000010846/1-1037 RWESDGEGLV WRDGEPVQGL TKEGEKTSYV LTEKLGEEDP RSLTLYVEVA ENSBTAP00000009690/1-1040 RWESDGEGLV WRDGEPVQGL TKEGEKTSYI LTDKLGEKDP RSLTLYVEVA bmy_01509T0/1-1111 RWESDGEGLV WRDGEPVQGL TKEGEKTSYV LTDKLGEEDP RSLTLYVEVA BACU017890/1-1045 RWESDGEGLV WRDGEPVQGL TKEGEKTSYV LTDKLGEEDP RSLTLYVEVA 201 250 ENSP00000457788/1-1057 CNGLLGAGKG SMIAAPDPEK MFQLSRAELA VFHRDVHMLL VDLELLLGIA ENSTTRP00000010846/1-1037 CNGLLGAGKG TMIAAPDPEK MFQVSRAELA VFHRDVHKLL VDLELLLGMA ENSBTAP00000009690/1-1040 CNGLLGAGKG SMIAAPDPEK MFQVSRAELA VFHRDVYKLL VDLELLLGIA bmy_01509T0/1-1111 CNGLLGAGKG HMIAAPDPEK MFQVSRAELA VFHRDVHKLL VDLELLLGVA BACU017890/1-1045 CNGLLGAGKG HMIAAPDPEK MFQVSRAELA VFHRDVHKLL VDLELLLGMA 251 300 ENSP00000457788/1-1057 KGLGKDNQRS FQALYTANQM VNVCDPAQPE TFPVAQALAS RFFGQHGGES ENSTTRP00000010846/1-1037 KGLGEDNQRS YQALYTANQM VNICDPAQPE TFPVAQALAS KFFGQRGGES ENSBTAP00000009690/1-1040 KGLGEDNQRS FQALYTANQM VNVCDPAQPE TFPVAQALAS KFFGQRWGES bmy_01509T0/1-1111 KGLGEDNQRS YMALYTANQM VNVCDPAQPE TFPVAQALAS KFFGQRG--- BACU017890/1-1045 KGLGEDNQRS YQALYTANQM VNVCDPAQPE TFPVAQALAS KFFGQRGGES 301 350 ENSP00000457788/1-1057 QHTIHATGHC HIDTAWLWPF KETVRKCARS WVTALQLMER NPEFIFACSQ ENSTTRP00000010846/1-1037 QHTIHALGHC HIDTAWLWPF KETVRKCARS WVTVVQLMER NPEFIFACSQ ENSBTAP00000009690/1-1040 QHTIHAMGHC HIDTAWLWPF KETVRKCARS WVTVVQLMEQ NPEFIFACSQ bmy_01509T0/1-1111 ---------- ----AWLWPF KETVRKCARS WVTVVQLMER NPEFIFVCSQ BACU017890/1-1045 QHTIHALGHC HIDTAWLWPF KETVRKCARS WVTVVQLMER NPEFIFVCSQ 351 400 ENSP00000457788/1-1057 AQQLEWVKSR YPGLYSRIQE FACRGQFVPV GGTWVEMDGN LPSGEAMVRQ ENSTTRP00000010846/1-1037 AQQLAWVKSH YPGLHARLQE FACRGQFVPV GGTWVEMDGN LPSGEAMVRQ ENSBTAP00000009690/1-1040 AQQLEWVRSH YPGLHARLQE FACRGQFVPV GGTWVEMDGN LPSGESMVRQ bmy_01509T0/1-1111 AQQLAWVKSH YPGLHVRLQE FACHGQFVPV GGTWVEMDGN LPSGEAMVRQ BACU017890/1-1045 AQQLAWVKSH YPGLHARLQE FACRGQFVPV GGTWVEMDGN LPSGEAMVRQ 401 450 ENSP00000457788/1-1057 FLQGQNFFLQ EFGKMCSEFW LPDTFGYSAQ LPQIMHGCGI RRFLTQKLSW ENSTTRP00000010846/1-1037 FLQGQSFFLH EFGKMCSEIW LPYTFCYSSH LPQIMRTCGI RHFLT-KLSW ENSBTAP00000009690/1-1040 FLQGQNFFRQ EFGKMCSEFW LPDTFGYSAQ LPQIMRSCGI KRFLTQKLSW bmy_01509T0/1-1111 FLQGQSFFLQ EFGKMCSEFW LPDTFGYSAQ LPQIMRSCGI RRFLTQKLSW BACU017890/1-1045 FLQGQSFFLQ EFGKMCSEFW LPDTFGYSAQ LPQIMRSCGI RRFLTQKLSW 451 500 ENSP00000457788/1-1057 NLVNSFPHHT FFWEGLDGSR VLVHFPPGDS YGMQGSVEE- ---------- ENSTTRP00000010846/1-1037 NLVKNFPHHT FFWEGLDGSR VLAHFPPGDS YGMHGTVEE- ---------- ENSBTAP00000009690/1-1040 NLVNSFPHHT FFWEGLDGSQ VLAHFPPGDS YGMQGSVEE- ---------- bmy_01509T0/1-1111 NLVNSFPHHT FFWEGLDGSR VLAHFPPGDS YGMQGSVEEV RGHLVAKVGD BACU017890/1-1045 NLVNSFPHHT FFWEGLDGSR VLAHFPPGDS YGMQGSVEE- ---------- 501 550 ENSP00000457788/1-1057 ---------- ---------- -VLKTVANNR DKGRANHSAF LFGFGDGGGG ENSTTRP00000010846/1-1037 ---------- ---------- -VLKTVAKNR DKGRTNHSAF LFGFGDGGGG ENSBTAP00000009690/1-1040 ---------- ---------- -VLKTVAKNR DKGRTNHSAF LFGFGDGGGG bmy_01509T0/1-1111 GRQAGEGWVS CPKLTLSPPV QVLKTVAKNR DKGRTNHSAF LFGFGDGGGG BACU017890/1-1045 ---------- ---------- -VLKTVAKNR DKGRTNHSAF LFGFGDGGGG 551 600 ENSP00000457788/1-1057 PTQTMLDRLK RLSNTDGLPR VQLSSPRQLF SALESDSEQL CTWVGELFLE ENSTTRP00000010846/1-1037 PTQTMVDRLK RLCNTDGLPR VQFSSPERLF SALEGHSEQL CTWVGELFLE ENSBTAP00000009690/1-1040 PTQTMVDRLK RLCNTDGLPR VQLSSPERLF SALEGHSGQL CTWVGELFLE bmy_01509T0/1-1111 PTQTMVDRLK RLCNTDGLPR VQLSSPERLF SALEGHSGQL CTWVGELFLE BACU017890/1-1045 PTQTMVDRLK RLCNTDGLPR VQLSSPERLF SALEGHSGQL CTWVGELFLE 601 650 ENSP00000457788/1-1057 LHNGTYTTHA QIKKGNRECE RILHDVELLS SLALARSAQF LYPAAQLQHL ENSTTRP00000010846/1-1037 LHNGTYTTHA QIKKGNRECE RILHDVELLS SLALARSAQF LYPAAQLQDL ENSBTAP00000009690/1-1040 LHNGTYTTHA QIKKGNRECE RILHDVELLS SLALARSTQF LYPAALLQDL bmy_01509T0/1-1111 LHNGTYTTHA QIKKGNRECE RILHDVELLS SLALARSAQF LYPAAQLQDL BACU017890/1-1045 LHNGTYTTHA QIKKGNRECE RILHDVELLS SLALARSAQF LYPAAQLQDL 651 700 ENSP00000457788/1-1057 WRLLLLNQFH DVVTGSCIQM VAEEAMCHYE DIRSHGNTLL SAAAAALCAG ENSTTRP00000010846/1-1037 WRLLLLNQFH DVVTGSCIQL VAEEAMCHYE DIRSRGNTLL SAAAAALCAG ENSBTAP00000009690/1-1040 WRLLLLNQFH DVVTGSCIQL VAEEAMCHYE DIRSHGNTLL SAAAAALCAG bmy_01509T0/1-1111 WRLLLLNQFH DVVTGSCIQL VAEEAMCHYE DIRSRGNTLL SAAAAALCAG BACU017890/1-1045 WRLLLLNQFH DVVTASCIQL VAEEAMCHYE DIRSRGNTLL SAAAAALCAG 701 750 ENSP00000457788/1-1057 EPGPEGLLIV NTLPWKRIEV MALPKPGGAH SLGLTPSPGD SAQHGLCSCS ENSTTRP00000010846/1-1037 EPGPEGLLIV NTLPWKRTEV LALPRPGGAH CLALVTVPS- ---MGYAPAP ENSBTAP00000009690/1-1040 EPGPEGLLIV NTLPWKRTEV LALPRPGGAH CLALVTVPG- ---MGYAPAP bmy_01509T0/1-1111 EPGPEGLLIV NTLPWKRTEV LALPRPGGAH CLALVTVPG- ---MGYAPAP BACU017890/1-1045 EPGPEGLLIV NTLPWKRTEV LALPRPGGAH CLALVTVPG- ---MGYAPAP 751 800 ENSP00000457788/1-1057 SPHLTAAPAA PAACVRSARA PTDSASRPPP TKTDGSVTLD NGIIRVKLDP ENSTTRP00000010846/1-1037 TPTSLQ-PLL PQQPVFVVQ- ---------- -ETDGSVTLD NGIIRVRLDP ENSBTAP00000009690/1-1040 TPTSLQ-PLP PQQPVFVVQ- ---------- -ETDGSVTLD NGIIRVRLDP bmy_01509T0/1-1111 TPISLQ-PLL PQQPVFVVQ- ---------- -ETDGSVTLD NGIIRVRLDP BACU017890/1-1045 TPTSLQ-PLL PQQPVFAVQ- ---------- -ETDGSVTLD NGIIRVRLDP 801 850 ENSP00000457788/1-1057 TGRLTSLVLV ASGREAIAEG AVGNQFVLFD DVPLYWDAWD VMDYHLETRK ENSTTRP00000010846/1-1037 TGRLTSLVLV ASGREAIAEG AVGNQFGLFD DVPLYWNAWD VMN-HLET-K ENSBTAP00000009690/1-1040 TGRLTSLVLV ASGREAIAEG AVGNQFVLFD DVPLYWDAWD VMDYHLETRK bmy_01509T0/1-1111 TGRLTSLVLV ASGREAIAEG AVGNQFVLFD DVPLYWDAWD VMDYHLETRK BACU017890/1-1045 TGRLTSLVLV ASGREAIAEG AVGNQFVLFD DVPLYWDAWD VMDYHLETRK 851 900 ENSP00000457788/1-1057 PVLGQAGTLA VGTEGGLRGS AWFLLQISPN SRLSQEVVLD VGCPYVRFHT ENSTTRP00000010846/1-1037 PVLGQAGTLA VGTQGGVRGS AWFLLQISPN SQLSQEVVLD VGCPYVRFHT ENSBTAP00000009690/1-1040 PVLGQAGTLA VGTEGGVRGS AWFLLQISPN SRLSQEVVLD VGCPYVRFHT bmy_01509T0/1-1111 PVLGQAGTLA VGTEGGMRGS AWFLLQISPN SRLSQEIVLD VGCPYVRFHT BACU017890/1-1045 PVLGQAGTLA VGTEGGMRGS AWFLLQISPN SRLSQEVVLD IGCPYVRFHT 901 950 ENSP00000457788/1-1057 EVHWHEAHKF LKVEFPARVR SSQATYEIQF GHLQRPTHYN TSWDWARFEV ENSTTRP00000010846/1-1037 EVHWHEAHKF LKVEFPARVR SPQATFEVQF GHLQRPTHYN TSWDWARFEV ENSBTAP00000009690/1-1040 EVHWHEAHKF LKVEFPARVR SPQATYEVQF GHLQRPTHYN TSWDWARFEV bmy_01509T0/1-1111 EVHWHEAHKF LKVEFPARVR SPQATFEVQF GHLQRPTHYN TSWDWARFEV BACU017890/1-1045 EVHWHEAHKF LKVEFPARVR SPQATFEVQF GHLQRPTHYN TSWDWARFEV 951 1000 ENSP00000457788/1-1057 WAHRWMDLSE HGFGLALLND CKYGASVRGS ILSLSLLRAP KAPDATADTG ENSTTRP00000010846/1-1037 WAHRWIDLSE HGFGLALLND CKYGASVRGS VLSLSLLRAP KSPDATVDXX ENSBTAP00000009690/1-1040 WAHRWMDLSE HGFGLALLND CKYGASVRGN VLSLSLLRAP KSPDATVDMG bmy_01509T0/1-1111 WAHRWMDLSE HGFGLALLND CKYGASVRGS VLSLSLLRAP KSPDSTVDMG BACU017890/1-1045 WAHRWMDLSE HGFGLALLND CKYGASVRGS VLSLSLLRAP KSPDSTVDMG 1001 1050 ENSP00000457788/1-1057 RHEFTYALMP HKGSFQDAGV IQAAYSLNFP LLALPAPSPA PATSWSAFSV ENSTTRP00000010846/1-1037 XXXXXXXXXX XXXSFQDAGV IPAAYSLNFP LLALPAPGPA PAAAWSAFSV ENSBTAP00000009690/1-1040 RHEFTYALMP HKGSFQDAGV IPAAYSLNFP LLALPAPGPA PAAAWSAFSV bmy_01509T0/1-1111 RHEFTYALMP HEGSFQDAGV IPAAYSLNFP LLALPAPGPA PAAAWSAFSV BACU017890/1-1045 RHEFTYALMP HEGSFQDAGV IPAAYSLNFP LLALPAPGPA PAAAWSAFSV 1051 1100 ENSP00000457788/1-1057 SSPAVVLETV KQ-----AES SPQRRSLVLR LYEAHGSHVD CWLHLSLPVQ ENSTTRP00000010846/1-1037 SSPAVVLETV KQ-----AET SLQGRKLVLR LYEAHGSHVD CWLHMSLPVQ ENSBTAP00000009690/1-1040 SSPAVVLETV KQ-----AET SPQGRTLLLR LYEAHGSHSD CWLHTSLPVQ bmy_01509T0/1-1111 SSPAVVLETV KQARAGGAET SLQGRKLVLR LYEAHGSHVD CWLHTSLPVQ BACU017890/1-1045 SSPAVVLETV KQARAGGAET SLQGRKLVLR LYEAHGSHVD CWLHTSLPVQ 1101 1150 ENSP00000457788/1-1057 EAILCDLLER PDPAGHLTLR DNRLKLTFSP FQVLSLLLVL QPPPH ENSTTRP00000010846/1-1037 EAVLCDLLER RDPAGPLPLR DSRLKLTFSP FQVQSLLLVL QPAPS ENSBTAP00000009690/1-1040 EAVLCDLLER RDPTGPLLLR DNRLKLTFAP FQVQSLLLLL QPPPN bmy_01509T0/1-1111 EAVLCDLLER RDPAGPLPLR DSRLKLTFSP FQVQSLLLVL QPAPR BACU017890/1-1045 EAVLCDLLER RDPAGPLPLR DSRLKLTFSP FQVQSLLLVL QPAPS