Part of scaffold_9 (Scaffold)

For more information consult the page for scaffold_9 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBM39 ENSTTRG00000017039 (Bottlenosed dolphin)

Gene Details

RNA binding motif protein 39

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000016153, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.49%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0195)

RBM39 ENSBTAG00000003949 (Cow)

Gene Details

RNA-binding protein 39

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002491, Cow)

Protein Percentage 99.81%
cDNA percentage 97.33%
Ka/Ks Ratio 0.00681 (Ka = 0.0008, Ks = 0.1229)

RBM39  (Minke Whale)

Gene Details

RNA binding motif protein 39

External Links

Gene match (Identifier: BACU015527, Minke Whale)

Protein Percentage 95.72%
cDNA percentage 96.22%
Ka/Ks Ratio 0.55004 (Ka = 0.0334, Ks = 0.0607)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1593 bp    Location:3742509..3712648   Strand:-
>bmy_00595
ATGGCAGACGATATTGATATTGAAGCAATGCTTGAGGCTCCTTACAAGAAGGTGAGAAAAAACAAGTCGGATGAGAACAAGTTGAGCAGTGCCAACGGCCATGAAGAACGTAGCAAAAAGAGGAAAAAAAGCAAGAGCAGAAGTCGTAGTCATGAACGAAAAAGAAGCAAAAGTAAGGAACGGAAGCGAAGTAGAGATAGAGAAAGGAAAAAGAGCAAAAGCCGTGAAAGGAAGCGAAGTAGAAGCAAAGAAAGGAGACGGAGCCGTTCAAGAAGTCGAGATCGCAGATTCAGAGGCCGCTACAGAAGTCCTTACTCCGGACCAAAATTTAACAGTGCCATCCGAGGAAAGATTGGGTTGCCTCATAGCATCAAATTAAGCAGACGACGCTCCCGAAGCAAAAGTCCATTCAGAAAAGACAAGAGCCCAGTGAGGGAGCCTATTGATAATCTGACTCCTGAGGAAAGAGATGCAAGGACCGTTTTCTGCATGCAGCTGGCAGCAAGAATTCGGCCAAGGGATTTGGAAGAGTTTTTCTCCACAGTAGGAAAGGTTCGAGATGTGAGGATGATTTCTGATAGAAATTCAAGACGTTCCAAAGGAATTGCTTATGTGGAATTTGTCGATGTTAGCTCAGTGCCTCTAGCAATAGGATTAACTGGCCAGCGGGTTTTAGGAGTGCCAATCATAGTACAGGCGTCACAGGCAGAAAAAAACAGAGCTGCAGCAATGGCAAACAATCTACAAAAGGGAAGTGCTGGACCTATGAGGCTCTATGTGGGCTCGTTACACTTTAACATAACTGAAGATATGCTTCGGGGGATCTTTGAGCCTTTTGGAAGGATTGAAAGTATCCAGCTCATGATGGATAGTGAAACAGGTCGATCCAAGGGATACGGATTTATTACGTTTTCTGATTCAGAATGTGCCAAGAAAGCTTTGGAACAACTTAATGGATTTGAGCTAGCAGGAAGGCCAATGAAAGTTGGTCATGTTACTGAACGTACTGATGCTTCCAGTGCTAGCTCATTTTTGGACAGTGATGAACTGGAAAGGACTGGAATTGACTTGGGAACAACTGGTCGTCTCCAGTTAATGGCTAGACTCGCAGAGGGTACAGGCTTGCAGATCCCACCAGCAGCACAGCAGGCTTTGCAAATGAGTGGCTCTCTGGCATTTGGTGCTGTGGCAGATTTGCAAACAAGACTTTCCCAACAGACTGAAGCTTCAGCATTAGCTGCAGCTGCCTCTGTTCAACCTCTTGCAACACAGTGTTTCCAACTCTCTAACATGTTTAACCCTCAAACAGAAGAAGAAGTTGGATGGGATACAGAGATTAAAGATGATGTGATTGAAGAATGTAATAAACATGGAGGAGTTATTCATATTTATGTTGACAAAAATTCAGCTCAGGGCAATGTGTATGTGAAGTGCCCATCAATTGCTGCAGCCATTGCTGCTGTCAATGCATTGCATGGCAGGTGGTTTGCTGGTAAAATGATAACAGCAGCGTATGTACCTCTTCCAACTTACCACAACCTCTTTCCTGATTCCATGACAGCAACACAACTACTGGTTCCAAGTAGACGATGA

Related Sequences

bmy_00595T0 Protein

Length: 531 aa      View alignments
>bmy_00595T0
MADDIDIEAMLEAPYKKVRKNKSDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRDRERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKLSRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQTEASALAAAASVQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR*