KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:07 2014 Check: 00 .. Name: BACU015527/1-397 Len: 537 Check: 2111 Weight: 1.00 Name: bmy_00595T0/1-530 Len: 537 Check: 6268 Weight: 1.00 Name: ENSP00000253363/1-530 Len: 537 Check: 4165 Weight: 1.00 Name: ENSTTRP00000016153/1-530 Len: 537 Check: 4165 Weight: 1.00 Name: ENSBTAP00000002491/1-525 Len: 537 Check: 9354 Weight: 1.00 // 1 50 BACU015527/1-397 --------MC IKSYFKRIS- ---------- ---------- ---------- bmy_00595T0/1-530 MADDIDIEAM LEAPYKKVRK NKSDENKLSS ANGHEERSKK RKKSKSRSRS ENSP00000253363/1-530 MADDIDIEAM LEAPYKK--- ---DENKLSS ANGHEERSKK RKKSKSRSRS ENSTTRP00000016153/1-530 MADDIDIEAM LEAPYKK--- ---DENKLSS ANGHEERSKK RKKSKSRSRS ENSBTAP00000002491/1-525 MADDIDIEAM LEAPYKK--- ---DENKLSS ANGHEERSKK RKKSKSRSRS 51 100 BACU015527/1-397 ---------- ---------- ---------- ---------- ---------- bmy_00595T0/1-530 HERKRSKSKE RKRSRDRERK KSKSRERKRS RSKERRRSRS RSRDRRFRGR ENSP00000253363/1-530 HERKRSKSKE RKRSRDRERK KSKSRERKRS RSKERRRSRS RSRDRRFRGR ENSTTRP00000016153/1-530 HERKRSKSKE RKRSRDRERK KSKSRERKRS RSKERRRSRS RSRDRRFRGR ENSBTAP00000002491/1-525 HERKRSKSKE RKRSRDRERK KSKSRERKRS RSKERRRSRS RSRDRRFRGR 101 150 BACU015527/1-397 ----Y---KV NSIFF----- ---------- ---------- -TPVREPIDN bmy_00595T0/1-530 YRSPYSGPKF NSAIRGKIGL PHSIKLSRRR SRSKSPFRKD KSPVREPIDN ENSP00000253363/1-530 YRSPYSGPKF NSAIRGKIGL PHSIKLSRRR SRSKSPFRKD KSPVREPIDN ENSTTRP00000016153/1-530 YRSPYSGPKF NSAIRGKIGL PHSIKLSRRR SRSKSPFRKD KSPVREPIDN ENSBTAP00000002491/1-525 YRSPYSGPKF NSAIRGKIGL PHSIKLSRRR SRSKSPFRKD KSPVREPIDN 151 200 BACU015527/1-397 LTPEERDART VFCMQLAARI RPRDLEEFFS TVGKVRDVRM ISDRNSRRSK bmy_00595T0/1-530 LTPEERDART VFCMQLAARI RPRDLEEFFS TVGKVRDVRM ISDRNSRRSK ENSP00000253363/1-530 LTPEERDART VFCMQLAARI RPRDLEEFFS TVGKVRDVRM ISDRNSRRSK ENSTTRP00000016153/1-530 LTPEERDART VFCMQLAARI RPRDLEEFFS TVGKVRDVRM ISDRNSRRSK ENSBTAP00000002491/1-525 LTPEERDART VFCMQLAARI RPRDLEEFFS TVGKVRDVRM ISDRNSRRSK 201 250 BACU015527/1-397 GIAYVEFVDV SSVPLAIGLT GQRVLGVPII VQASQAEKNR AAAMANNLQK bmy_00595T0/1-530 GIAYVEFVDV SSVPLAIGLT GQRVLGVPII VQASQAEKNR AAAMANNLQK ENSP00000253363/1-530 GIAYVEFVDV SSVPLAIGLT GQRVLGVPII VQASQAEKNR AAAMANNLQK ENSTTRP00000016153/1-530 GIAYVEFVDV SSVPLAIGLT GQRVLGVPII VQASQAEKNR AAAMANNLQK ENSBTAP00000002491/1-525 GIAYVEFVDV SSVPLAIGLT GQRVLGVPII VQASQAEKNR AAAMANNLQK 251 300 BACU015527/1-397 GSAGPMRLYV GSLHFNITED MLRGIFEPFG RIESIQLMMD SETGRSKGYG bmy_00595T0/1-530 GSAGPMRLYV GSLHFNITED MLRGIFEPFG RIESIQLMMD SETGRSKGYG ENSP00000253363/1-530 GSAGPMRLYV GSLHFNITED MLRGIFEPFG RIESIQLMMD SETGRSKGYG ENSTTRP00000016153/1-530 GSAGPMRLYV GSLHFNITED MLRGIFEPFG RIESIQLMMD SETGRSKGYG ENSBTAP00000002491/1-525 GSAGPMRLYV GSLHFNITED MLRGIFEPFG RIESIQLMMD SETGRSKGYG 301 350 BACU015527/1-397 FITFSDSECA KKALEQLNGF ELAGRPMKVG HVTERTDASS ASSFLDSDEL bmy_00595T0/1-530 FITFSDSECA KKALEQLNGF ELAGRPMKVG HVTERTDASS ASSFLDSDEL ENSP00000253363/1-530 FITFSDSECA KKALEQLNGF ELAGRPMKVG HVTERTDASS ASSFLDSDEL ENSTTRP00000016153/1-530 FITFSDSECA KKALEQLNGF ELAGRPMKVG HVTERTDASS ASSFLDSDEL ENSBTAP00000002491/1-525 FITFSDSECA KKALEQLNGF ELAGRPMKVG HVTERTDASS ASSFLDSDEL 351 400 BACU015527/1-397 ERTGIDLGTT GRLQLMARLA EGTGLQIPPA AQQALQMSGS LAFGAVA--- bmy_00595T0/1-530 ERTGIDLGTT GRLQLMARLA EGTGLQIPPA AQQALQMSGS LAFGAVA--- ENSP00000253363/1-530 ERTGIDLGTT GRLQLMARLA EGTGLQIPPA AQQALQMSGS LAFGAVAEFS ENSTTRP00000016153/1-530 ERTGIDLGTT GRLQLMARLA EGTGLQIPPA AQQALQMSGS LAFGAVAEFS ENSBTAP00000002491/1-525 ERTGIDLGTT GRLQLMARLA EGTGLQIPPA AQQALQMSGS LAFGAVA--- 401 450 BACU015527/1-397 ---------- ----ASALAA AASVQPLATQ CFQLSNMFNP QTEEEVGWDT bmy_00595T0/1-530 ---DLQTRLS QQTEASALAA AASVQPLATQ CFQLSNMFNP QTEEEVGWDT ENSP00000253363/1-530 FVIDLQTRLS QQTEASALAA AASVQPLATQ CFQLSNMFNP QTEEEVGWDT ENSTTRP00000016153/1-530 FVIDLQTRLS QQTEASALAA AASVQPLATQ CFQLSNMFNP QTEEEVGWDT ENSBTAP00000002491/1-525 ---DLQTRLS QQTEASALAA AASVQPLATQ CFQLSNMFNP QTEEEVGWDT 451 500 BACU015527/1-397 EIKDDVIEEC NKHGGVIHIY VDKNSAQGNV YVKCPSIAAA IAAVNALHGR bmy_00595T0/1-530 EIKDDVIEEC NKHGGVIHIY VDKNSAQGNV YVKCPSIAAA IAAVNALHGR ENSP00000253363/1-530 EIKDDVIEEC NKHGGVIHIY VDKNSAQGNV YVKCPSIAAA IAAVNALHGR ENSTTRP00000016153/1-530 EIKDDVIEEC NKHGGVIHIY VDKNSAQGNV YVKCPSIAAA IAAVNALHGR ENSBTAP00000002491/1-525 EIKDDVIEEC NKHGGVIHIY VDKNSAQGNV YVKCPSIAAA IAAVNALHGR 501 550 BACU015527/1-397 WF-AGKMITA AYVPLPTYHN LFPDSMTATQ LLVPSRR bmy_00595T0/1-530 WF-AGKMITA AYVPLPTYHN LFPDSMTATQ LLVPSRR ENSP00000253363/1-530 WF-AGKMITA AYVPLPTYHN LFPDSMTATQ LLVPSRR ENSTTRP00000016153/1-530 WF-AGKMITA AYVPLPTYHN LFPDSMTATQ LLVPSRR ENSBTAP00000002491/1-525 WFAAGKMITA AYVPLPTYHN LFPDSMTATQ LLVPSRR