Sequence detailsbmy_00591 (Coding sequence)

Part of scaffold_9 (SequenceType object (1))

For more information consult the page for scaffold_9 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CPNE1ENSBTAG00000006955 (Cow)

Gene Details

copine-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000009138, Cow)

Protein Percentage 92.18%
cDNA percentage 92.3%
Ka/Ks Ratio 0.2514 (Ka = 0.0461, Ks = 0.1834)

CPNE1 (Minke Whale)

Gene Details

copine I

External Links

Gene match (Identifier: BACU018607, Minke Whale)

Protein Percentage 95.34%
cDNA percentage 96.03%
Ka/Ks Ratio 0.64765 (Ka = 0.0365, Ks = 0.0564)

Additional orthologs identified in other species via the OPTIC pipeline.

CPNE1 (Human)   Cpne1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1908 bp    Location:3657821..3648852   Strand:-
Raw sequence 
>bmy_00591
ATGGCCCACTGCGTGACCTTGGTTCAGCTGTCCATTTCATGTGACCACCTCATTGACAAGGATATCAGCTCCAAGTCTGACCCACTCTGCGTCCTTTTACAGGATGTGGGAGGGGGCAAATGGGCTGAGCTTGGCCGGACTGAGCGAGTACGGAACTGCTCGAGCCCTGAGTTCTCCAAGACTCTGCAGCTTGAGTACCACTTTGAAACAGTCCAAAAGCTCCGATTTGGCATCTATGACATAGACAACAAGACACCTGAGCTGGGGGATGATGACTTCCTAGGAGGGGCTGAGTGTTCCCTAGGACAGGTTGTGTCCAGTCGGATACTAACTCTACCCTTGATGCTGAAGCCTGGAAAACCTGCTGGGCGAGGGACCATCACGGTCTCAGCTCAGGAGCTGAAGGATAGTCGTGTAGTGACCATGGAGGTGGAGGCCAGAAACCTAGATAAGAAGGAGGCCCTGGAGGTTCAAGAATTAAGCGGACAGGGATGGTGTGTTGGAGGGGGAAGGGTGGGAAGGTCTTTCATAGTGGTTGTCAGGTGCCTGAGTCTTAACTGCGGTCTCTGTGATATTGACAGGACTTCCTGGGAAAATCGGATCCGTTCTTGGAGTTTTTCCATCAGGGTGATGGGAAATGGCACCTGGCATACAGATCTGAGGTGTGAGACCCCTGGGATTGGGTATGATGGGGTAGGAGAGAATCTCCTGGGGCTTGTGATTACCAGGGTTTGGAGCACAGGGCTAAAGAGTCTGCATATGGGTAGGAAGAATGGCAGCTCCCCACATGCCAACGCAGAGCTTACTAGAGGCCTTGCCCTCCACCTTCAGGTCATCAAGAACAACCTAAACCCTACTTGGAAGCGCTTCTCTGTTCCCCTTCAACATTTCTGTGGGGGAGACCCCAGCACACCCATCCAGGTGCGATGCTCAGATTATGACAGTGATGGTTCACATGACCTCATTGGTACCTTCCACACCAGCTTGGCCCAGCTGCAAGCAGTCCCAGCTGAGTTTGAATGCATCCACCTTGAGAAACAGCAGAAAAAGAAAAGCTACAAGAACTCTGGAACTATCTGTGTCAAGATTTGTCAGGTAGAAACAGAATATTCATTCTTGGACTATGTGATGGGAGGCTGTCAAATCAACTTCACTGTGGGCGTGGACTTCACGGGCTCCAATGGAGACCCTTCCTCACCTGATTCCCTGCACTACCTGAGCCCAGCAGGGGTCAATGAGTACCTGACAGCACTGTGGAGTGTGGGCAGCGTGGTTCAGGACTATGATTCGGACAAGCTGTTCCCAGCATTTGGATTTGGGGCCCAGGTACCCCCTGACTGGCAGGTCTCCCATGAATTTGCCTTGAACTTCAACCCTAATAACCCCTACTGTGCAGGCATCCAGGGCATTGTGGATGCTTACCGCCAGGCCCTGCCCCAAGTTCGGCTCTATGGCCCCACCAACTTTGCACCCATCATCAACCATGTGGCTAGGTTTGCAGCCCAGGCTGCACATCAGAGGACGGCCTCGCAATACTTCGTGCTGTTGCTGCTGACCGATGGTGCTGTGACAGATGTGGAGGCCACACGTGAGGCTGTGGTTCGTGCCTCCTACCTGCCCATGTCAGTGATCATCGTGGGTGTGGGTGGTGCTGACTTCGAGGCCATGGAGCAGCTGGACGCTGATGGTGGACCCCTGCGTACACGCTCTGGGGAGGCAGCTGCTCGTGACATAGTGCAGTTTGTGCCCTACCGCCGCTTCCAGAATGCCCCTCGAGAGGCACTGGCGCAGACTGTACTTGCAGAAGTACCCACGCAACTGGTCTCCTACTTCAAGGCCCAAGGTTGGGCCCCATTCAAACCACTTCCACCTGCAGCCAAGGGCCCTGCACAGGTCCCTCAGGCCTAG

Related Sequences

bmy_00591T0 SequenceType object (3)

Length: 636 aa      View alignments
>bmy_00591T0
MAHCVTLVQLSISCDHLIDKDISSKSDPLCVLLQDVGGGKWAELGRTERVRNCSSPEFSKTLQLEYHFETVQKLRFGIYDIDNKTPELGDDDFLGGAECSLGQVVSSRILTLPLMLKPGKPAGRGTITVSAQELKDSRVVTMEVEARNLDKKEALEVQELSGQGWCVGGGRVGRSFIVVVRCLSLNCGLCDIDRTSWENRIRSWSFSIRVMGNGTWHTDLRCETPGIGYDGVGENLLGLVITRVWSTGLKSLHMGRKNGSSPHANAELTRGLALHLQVIKNNLNPTWKRFSVPLQHFCGGDPSTPIQVRCSDYDSDGSHDLIGTFHTSLAQLQAVPAEFECIHLEKQQKKKSYKNSGTICVKICQVETEYSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSPAGVNEYLTALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPNNPYCAGIQGIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAAHQRTASQYFVLLLLTDGAVTDVEATREAVVRASYLPMSVIIVGVGGADFEAMEQLDADGGPLRTRSGEAAARDIVQFVPYRRFQNAPREALAQTVLAEVPTQLVSYFKAQGWAPFKPLPPAAKGPAQVPQA*